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FFCP PHASE1:Mm9::chr19:28086045..28086080,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19726
|EntrezGene=19726
|HGNC=
|HGNC=
|MCL_coexpression_id=6
|TSSclassifier=NA
|UniProt=P48381
|UniProt=P48381
|association_with_transcript=-389bp_to_ENSMUST00000112613,ENSMUST00000173161,NM_011265,uc008hcb.2,uc008hcc.2,uc008hcd.2,uc008hce.2_5end
|association_with_transcript=-389bp_to_ENSMUST00000112613,ENSMUST00000173161,NM_011265,uc008hcb.2,uc008hcc.2,uc008hcd.2,uc008hce.2_5end
|cluster_id=chr19:28086045..28086080,-
|description=CAGE_peak_4_at_Rfx3_5end
|description=CAGE_peak_4_at_Rfx3_5end
|id=chr19:28086045..28086080,-
|id=chr19:28086045..28086080,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=3.04282809499109,5.23463111459042,5.0049916332849,9.37639055051173,11.0197060588196,4.70061961353291,7.47560449905682,11.2337291394171,11.2630977721333,10.2988391581677,2.73948749160808,2.39316476986009,6.67682846731702,6.8187913886818,2.99798785634096,3.84703008040669,2.09868563438444,5.52058789376916,7.12995054749842,3.39511721438424,3.40173160604279,2.78014663362479,2.35079810225042,2.07990149631429,0.45881856213434,2.8711598205751,3.01533397311352,3.44753972297422,0.570070258369122,0.504060259519861,1.10865255327652,8.25539875497521,6.1506478758457,0,4.04392267651784,1.16364251750945,5.51257261908397,20.9265815368454,11.720030167857,14.6586648312664,65.2936951714426,19.8083190637949,12.62326917881,1.51076181570693,1.01376931219515,0.734187008646726,0.782391344348039,3.48840250208714,3.07560655828261,6.22175677037707,2.09979632438044,1.43752564364972,10.9058693937529,12.3311564141929,3.6970317905671,0.771778308107841,0.573066879877513,2.06268836910977,4.65327859977075,3.70293685490423,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,1.92109152660777,2.48855069540346,2.29510095163874,1.89292465216244,1.42825492201902,1.76694832761291,4.16468717330844,3.06705507258356,2.75765635983006,3.30347642998166,2.42605942361857,0.768032666281217,3.29715719325485,2.74462930807229,6.77187381723788,0.837548997004143,1.68828783009504,1.68078072554491,4.12480019663135,2.98980529678116,3.72798891650601,1.13589289999776,1.058001841495,33.6242806893946,3.44169550792555,2.719885334831,0,1.94932925234301,0.448026887097336,2.52799956237153,1.1930122580464,0.779358013808606,0.70667914902068,5.0703631119605,5.13305909657271,12.7402619853323,14.2213340630666,1.73192832808971,0.760079596425296,3.0331466700887,2.16949371466214,20.4560928081266,3.85949561568544,2.60227990149204,2.74018930480927,2.30615497256059,1.05505848386836,2.82212897125692,1.38233250462643,0.247194967734374,2.60278842455841,0.884610551949874,2.75003644910596,3.3126227769059,4.363877278217,0,3.80615036115011,3.14170060220183,1.53274233125155,4.31334448221313,12.5979573508616,3.43089613097275,3.14560342750128,5.94750783664214,5.27748278874031,4.34560800480691,2.30143911597297,3.32460871295296,2.43361894601636,2.34230536855727,3.4833951770826,1.76905930903572,3.15662783829711,6.50602214813519,3.21862946206862,6.66229880279792,6.63101198477146,7.48401490664606,6.53379973452734,5.80950692270319,4.9153640440413,6.03590380211958,10.2117283290622,9.32540958068929,2.6303487891309,6.11703948296315,6.268538997399,3.70407845534298,4.77682240364384,6.31991868581911,7.97778512055617,4.54661599032948,3.72826390563903,2.11073453982987,3.42117916775928,6.62885259638589,4.13204886669548,3.23960937063494,2.09280550275367,1.07309360559848,1.75148013550754,1.97471819896177,0.820837320395476,1.94565142910054,1.90059983652932,1.53685080703735,1.34206418760372,5.67782861123144,5.76265829323993,2.97376904685418,0.793351699990633,8.10495352033889,3.94802342162745,4.63922860759536,3.63030344322017,2.89091456998331,1.52180500890047,0.949058123089023,0.658795818896044,1.50801125280162,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,1.1948476395262,4.1726938209678,7.31190480702264,2.25415471346161,6.72049381889537,5.81857461502877,5.19005067188357,4.7427402843193,2.50937251565324,2.98297582898612,1.48076596706161,1.1858105083486,3.17005700860579,3.53806191203765,3.59779379815766,2.43432145666204,4.3411888755435,3.31013607315846,2.30156909960649,1.13494658742525,0.823684239564244,2.87536413054709,1.48856379067401,1.87222603868736,0.757736633841335,0.896987067609561,0.964887042726734,3.32555742299888,3.7898282354097,8.14824882210129,6.45031325945715,6.57132695207806,9.21284415929987,9.75978927632656,5.07347484430277,4.09851374676097,3.5434350343804,3.98636921643718,3.27726629431476,3.10832967358612,3.18227928879325,4.52373851817817,1.08781136763742,0.491764273019036,1.10374698521893,4.0137647496948,1.64096361229084,0.983609672260053,2.01976741763498,4.73262329124385,5.85658116444958,8.83235930704476,6.4521575447189,9.80314165962534,12.4553673547086,4.85772842009873,4.09158201075837,6.7198922250909,1.92792789853084,5.10984306749767,3.20518086601059,2.44330439030364,4.61916344323099,3.98235415019888,13.352934988524,8.46505959501303,6.60117779145643,3.83892460745005,4.91896236710284,4.13485269069154,4.72593848320757,2.85197902707777,2.84433082142234,0,4.12542172992747,25.1925308257803,14.0447653344422,4.91562998374467,12.4315480318324,21.9901889716419,12.4858172321449,16.1258040190079,7.91608867697958,1.40803024838226,1.0591603543191,1.54369878638473,7.58476763530808,4.03661066739764,2.65376869683886,2.74556391207214,2.29797259643086,0.874442509889552,2.03967832211561,2.39219233116994,4.33412422722767,4.25947412950337,3.01389531207506,2.59719032669948,2.51655990527175,3.56954702987096,6.29781535456461,4.14599921413271,0,6.48488786841327,7.9294592179471,3.45617090629764,2.92723614420256,2.18362563746178,2.02296519577231,1.73572257023205,1.04702376793612,1.16653475962614,0.621339313086926,9.58277995763124,4.78452947340732,3.14371131868485,2.72231663681667,2.71235629303235,3.04121025883401,1.87771581833206,4.03633593016245,10.4859344425711,8.21386010808421,8.3528701814781,7.2682557744481,2.02725215290164,2.56777392912068,1.81889152168913,5.72885426135941,8.14593554603186,4.80781798079875,4.72606486958647,6.05798699688886,5.41068327250499,5.14213544197887,6.43222012882366,5.38786313185845,8.41513695707296,1.36038230169127,0.221985953374065,1.34570784914214,0.335769232728157,1.54551675225752,0.187682475451182,5.67770035228522,1.50057865355346,0,6.7770221114048,7.82552902062201,6.87474616127276,7.56154002312225,2.05524755931193,3.0215755895588,5.40018000185445,4.5032120322422,2.26571204492102,3.62432218226274,7.9916257639816,11.1726964552289,7.34154504742777,6.80698807791223,4.40187641518763,3.30918315210025,5.11167473943715,4.32673620201678,6.4183841918363,5.55933865880354,5.32306529769503,7.1678009726709,4.30750934361459,4.73786127796033,6.20303064720623,6.19181798667996,5.09891034157364,5.20854895252004,2.47251540481984,4.12156976376312,6.85738504770831,4.08194354166476,5.00715998889374,6.24989591519013,6.30532848782715,3.9768865709088,4.57319932181931,4.73525480588117,4.20992752922171,6.73370725989286,5.69448086996036,4.72821515402705,4.09231043169689,5.73266312388074,5.40138510747196,5.24602213669686,3.50897412668113,2.57845264857958,1.91288332068843,2.64709702943419,1.39120701372253
|phase1_expression=3.04282809499109,5.23463111459042,5.0049916332849,9.37639055051173,11.0197060588196,4.70061961353291,7.47560449905682,11.2337291394171,11.2630977721333,10.2988391581677,2.73948749160808,2.39316476986009,6.67682846731702,6.8187913886818,2.99798785634096,3.84703008040669,2.09868563438444,5.52058789376916,7.12995054749842,3.39511721438424,3.40173160604279,2.78014663362479,2.35079810225042,2.07990149631429,0.45881856213434,2.8711598205751,3.01533397311352,3.44753972297422,0.570070258369122,0.504060259519861,1.10865255327652,8.25539875497521,6.1506478758457,0,4.04392267651784,1.16364251750945,5.51257261908397,20.9265815368454,11.720030167857,14.6586648312664,65.2936951714426,19.8083190637949,12.62326917881,1.51076181570693,1.01376931219515,0.734187008646726,0.782391344348039,3.48840250208714,3.07560655828261,6.22175677037707,2.09979632438044,1.43752564364972,10.9058693937529,12.3311564141929,3.6970317905671,0.771778308107841,0.573066879877513,2.06268836910977,4.65327859977075,3.70293685490423,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,1.92109152660777,2.48855069540346,2.29510095163874,1.89292465216244,1.42825492201902,1.76694832761291,4.16468717330844,3.06705507258356,2.75765635983006,3.30347642998166,2.42605942361857,0.768032666281217,3.29715719325485,2.74462930807229,6.77187381723788,0.837548997004143,1.68828783009504,1.68078072554491,4.12480019663135,2.98980529678116,3.72798891650601,1.13589289999776,1.058001841495,33.6242806893946,3.44169550792555,2.719885334831,0,1.94932925234301,0.448026887097336,2.52799956237153,1.1930122580464,0.779358013808606,0.70667914902068,5.0703631119605,5.13305909657271,12.7402619853323,14.2213340630666,1.73192832808971,0.760079596425296,3.0331466700887,2.16949371466214,20.4560928081266,3.85949561568544,2.60227990149204,2.74018930480927,2.30615497256059,1.05505848386836,2.82212897125692,1.38233250462643,0.247194967734374,2.60278842455841,0.884610551949874,2.75003644910596,3.3126227769059,4.363877278217,0,3.80615036115011,3.14170060220183,1.53274233125155,4.31334448221313,12.5979573508616,3.43089613097275,3.14560342750128,5.94750783664214,5.27748278874031,4.34560800480691,2.30143911597297,3.32460871295296,2.43361894601636,2.34230536855727,3.4833951770826,1.76905930903572,3.15662783829711,6.50602214813519,3.21862946206862,6.66229880279792,6.63101198477146,7.48401490664606,6.53379973452734,5.80950692270319,4.9153640440413,6.03590380211958,10.2117283290622,9.32540958068929,2.6303487891309,6.11703948296315,6.268538997399,3.70407845534298,4.77682240364384,6.31991868581911,7.97778512055617,4.54661599032948,3.72826390563903,2.11073453982987,3.42117916775928,6.62885259638589,4.13204886669548,3.23960937063494,2.09280550275367,1.07309360559848,1.75148013550754,1.97471819896177,0.820837320395476,1.94565142910054,1.90059983652932,1.53685080703735,1.34206418760372,5.67782861123144,5.76265829323993,2.97376904685418,0.793351699990633,8.10495352033889,3.94802342162745,4.63922860759536,3.63030344322017,2.89091456998331,1.52180500890047,0.949058123089023,0.658795818896044,1.50801125280162,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,1.1948476395262,4.1726938209678,7.31190480702264,2.25415471346161,6.72049381889537,5.81857461502877,5.19005067188357,4.7427402843193,2.50937251565324,2.98297582898612,1.48076596706161,1.1858105083486,3.17005700860579,3.53806191203765,3.59779379815766,2.43432145666204,4.3411888755435,3.31013607315846,2.30156909960649,1.13494658742525,0.823684239564244,2.87536413054709,1.48856379067401,1.87222603868736,0.757736633841335,0.896987067609561,0.964887042726734,3.32555742299888,3.7898282354097,8.14824882210129,6.45031325945715,6.57132695207806,9.21284415929987,9.75978927632656,5.07347484430277,4.09851374676097,3.5434350343804,3.98636921643718,3.27726629431476,3.10832967358612,3.18227928879325,4.52373851817817,1.08781136763742,0.491764273019036,1.10374698521893,4.0137647496948,1.64096361229084,0.983609672260053,2.01976741763498,4.73262329124385,5.85658116444958,8.83235930704476,6.4521575447189,9.80314165962534,12.4553673547086,4.85772842009873,4.09158201075837,6.7198922250909,1.92792789853084,5.10984306749767,3.20518086601059,2.44330439030364,4.61916344323099,3.98235415019888,13.352934988524,8.46505959501303,6.60117779145643,3.83892460745005,4.91896236710284,4.13485269069154,4.72593848320757,2.85197902707777,2.84433082142234,0,4.12542172992747,25.1925308257803,14.0447653344422,4.91562998374467,12.4315480318324,21.9901889716419,12.4858172321449,16.1258040190079,7.91608867697958,1.40803024838226,1.0591603543191,1.54369878638473,7.58476763530808,4.03661066739764,2.65376869683886,2.74556391207214,2.29797259643086,0.874442509889552,2.03967832211561,2.39219233116994,4.33412422722767,4.25947412950337,3.01389531207506,2.59719032669948,2.51655990527175,3.56954702987096,6.29781535456461,4.14599921413271,0,6.48488786841327,7.9294592179471,3.45617090629764,2.92723614420256,2.18362563746178,2.02296519577231,1.7357225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|short_description=p4@Rfx3
|short_description=p4@Rfx3
}}
}}

Latest revision as of 13:58, 25 September 2015

Short description:p4@Rfx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rfx3_5end
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: -389bp_to_ENSMUST00000112613, ENSMUST00000173161, NM_011265, uc008hcb.2, uc008hcc.2, uc008hcd.2, uc008hce.2_5end
EntrezGene:Rfx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rfx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.82
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G965.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D54.74
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F88.15
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E614.04
pituitary gland, embryo E13.CNhs11009.370-44C74.92
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B921.99
pituitary gland, embryo E16.CNhs11036.449-43F612.49
pituitary gland, embryo E17.CNhs11039.1265-44F516.13
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C37.58
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D910.49
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C46.06
thymus, neonate N07.CNhs11211.713-19D35.41
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A26.43
thymus, neonate N25.CNhs11125.1362-25G75.39
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I87.99
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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