FFCP PHASE1:Mm9::chr3:51364738..51364797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73251 | |EntrezGene=73251 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8VHL1 | |UniProt=Q8VHL1 | ||
|association_with_transcript=0bp_to_NM_080793,uc008peb.1_5end | |association_with_transcript=0bp_to_NM_080793,uc008peb.1_5end | ||
|cluster_id=chr3:51364738..51364797,- | |||
|description=CAGE_peak_2_at_Setd7_5end | |description=CAGE_peak_2_at_Setd7_5end | ||
|id=chr3:51364738..51364797,- | |id=chr3:51364738..51364797,- | ||
|ontology_enrichment_celltype=CL:0000117!3.27e-07!23;CL:0000337!3.27e-07!23 | |ontology_enrichment_celltype=CL:0000117!3.27e-07!23;CL:0000337!3.27e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-07,23;CL:0000337,1.03e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.46e-23!63;UBERON:0004121!1.47e-23!102;UBERON:0000924!1.47e-23!102;UBERON:0006601!1.47e-23!102;UBERON:0001017!1.42e-20!73;UBERON:0005743!1.42e-20!73;UBERON:0000955!1.88e-20!50;UBERON:0006238!1.88e-20!50;UBERON:0000073!2.13e-20!75;UBERON:0001016!2.13e-20!75;UBERON:0002616!7.41e-20!49;UBERON:0001049!5.51e-19!52;UBERON:0005068!5.51e-19!52;UBERON:0006241!5.51e-19!52;UBERON:0007135!5.51e-19!52;UBERON:0003056!1.03e-17!49;UBERON:0007811!1.69e-17!86;UBERON:0002346!2.00e-17!71;UBERON:0003075!2.00e-17!71;UBERON:0007284!2.00e-17!71;UBERON:0003080!2.27e-16!40;UBERON:0000153!5.05e-16!94;UBERON:0002780!8.52e-16!39;UBERON:0001890!8.52e-16!39;UBERON:0006240!8.52e-16!39;UBERON:0002020!1.57e-12!34;UBERON:0002791!4.71e-12!29;UBERON:0003528!4.71e-12!29;UBERON:0001893!4.71e-12!29;UBERON:0000956!1.79e-09!21;UBERON:0001869!1.79e-09!21;UBERON:0000203!1.79e-09!21;UBERON:0000064!5.54e-09!99;UBERON:0002619!2.99e-08!17;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!1.46e-23!63;UBERON:0004121!1.47e-23!102;UBERON:0000924!1.47e-23!102;UBERON:0006601!1.47e-23!102;UBERON:0001017!1.42e-20!73;UBERON:0005743!1.42e-20!73;UBERON:0000955!1.88e-20!50;UBERON:0006238!1.88e-20!50;UBERON:0000073!2.13e-20!75;UBERON:0001016!2.13e-20!75;UBERON:0002616!7.41e-20!49;UBERON:0001049!5.51e-19!52;UBERON:0005068!5.51e-19!52;UBERON:0006241!5.51e-19!52;UBERON:0007135!5.51e-19!52;UBERON:0003056!1.03e-17!49;UBERON:0007811!1.69e-17!86;UBERON:0002346!2.00e-17!71;UBERON:0003075!2.00e-17!71;UBERON:0007284!2.00e-17!71;UBERON:0003080!2.27e-16!40;UBERON:0000153!5.05e-16!94;UBERON:0002780!8.52e-16!39;UBERON:0001890!8.52e-16!39;UBERON:0006240!8.52e-16!39;UBERON:0002020!1.57e-12!34;UBERON:0002791!4.71e-12!29;UBERON:0003528!4.71e-12!29;UBERON:0001893!4.71e-12!29;UBERON:0000956!1.79e-09!21;UBERON:0001869!1.79e-09!21;UBERON:0000203!1.79e-09!21;UBERON:0000064!5.54e-09!99;UBERON:0002619!2.99e-08!17;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.13e-27,95;UBERON:0000924,5.13e-27,95;UBERON:0006601,5.13e-27,95;UBERON:0010371,1.46e-23,73;UBERON:0000073,1.58e-21,54;UBERON:0001017,3.80e-21,73;UBERON:0001016,5.69e-21,75;UBERON:0002346,6.11e-21,64;UBERON:0003075,6.11e-21,64;UBERON:0007284,6.11e-21,64;UBERON:0001049,6.22e-20,52;UBERON:0005068,6.22e-20,52;UBERON:0006241,6.22e-20,52;UBERON:0007135,6.22e-20,52;UBERON:0000955,3.39e-19,47;UBERON:0006238,3.39e-19,47;UBERON:0003056,3.90e-19,49;UBERON:0002616,1.44e-18,46;UBERON:0003080,1.12e-17,40;UBERON:0002780,4.75e-17,39;UBERON:0001890,4.75e-17,39;UBERON:0006240,4.75e-17,39;UBERON:0010314,3.16e-14,92;UBERON:0002020,1.70e-13,34;UBERON:0003528,5.61e-13,29;UBERON:0002791,5.61e-13,29;UBERON:0001893,5.61e-13,29;UBERON:0000956,3.59e-10,21;UBERON:0001869,3.59e-10,21;UBERON:0000203,3.59e-10,21;UBERON:0002619,7.68e-09,17;UBERON:0002021,7.19e-08,10;UBERON:0000411,7.19e-08,10;UBERON:0001950,7.19e-08,10 | |||
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| ||
|short_description=p2@Setd7 | |short_description=p2@Setd7 | ||
}} | }} |
Latest revision as of 13:58, 25 September 2015
Short description: | p2@Setd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Setd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_080793, uc008peb.1_5end |
EntrezGene: | Setd7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.13e-27 | 95 |
ectoderm | 5.13e-27 | 95 |
presumptive ectoderm | 5.13e-27 | 95 |
ecto-epithelium | 1.46e-23 | 73 |
regional part of nervous system | 1.58e-21 | 54 |
central nervous system | 3.80e-21 | 73 |
nervous system | 5.69e-21 | 75 |
neurectoderm | 6.11e-21 | 64 |
neural plate | 6.11e-21 | 64 |
presumptive neural plate | 6.11e-21 | 64 |
neural tube | 6.22e-20 | 52 |
neural rod | 6.22e-20 | 52 |
future spinal cord | 6.22e-20 | 52 |
neural keel | 6.22e-20 | 52 |
brain | 3.39e-19 | 47 |
future brain | 3.39e-19 | 47 |
pre-chordal neural plate | 3.90e-19 | 49 |
regional part of brain | 1.44e-18 | 46 |
anterior neural tube | 1.12e-17 | 40 |
regional part of forebrain | 4.75e-17 | 39 |
forebrain | 4.75e-17 | 39 |
future forebrain | 4.75e-17 | 39 |
structure with developmental contribution from neural crest | 3.16e-14 | 92 |
gray matter | 1.70e-13 | 34 |
brain grey matter | 5.61e-13 | 29 |
regional part of telencephalon | 5.61e-13 | 29 |
telencephalon | 5.61e-13 | 29 |
cerebral cortex | 3.59e-10 | 21 |
cerebral hemisphere | 3.59e-10 | 21 |
pallium | 3.59e-10 | 21 |
regional part of cerebral cortex | 7.68e-09 | 17 |
occipital lobe | 7.19e-08 | 10 |
visual cortex | 7.19e-08 | 10 |
neocortex | 7.19e-08 | 10 |