FFCP PHASE1:Mm9::chr5:136410427..136410438,-: Difference between revisions
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{{FFCP|EntrezGene=22628|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-7bp_to_ENSMUST00000126192_5end|description=CAGE_peak_3_at_Ywhag_5end|id=chr5:136410427..136410438,-|ontology_enrichment_celltype=CL:0000117!1.44e-08!23;CL:0000337!1.44e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-08,23;CL:0000337,1.44e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.82e-17!102;UBERON:0000924!3.82e-17!102;UBERON:0006601!3.82e-17!102;UBERON:0002346!4.78e-17!71;UBERON:0003075!4.78e-17!71;UBERON:0007284!4.78e-17!71;UBERON:0001049!5.40e-16!52;UBERON:0005068!5.40e-16!52;UBERON:0006241!5.40e-16!52;UBERON:0007135!5.40e-16!52;UBERON:0000955!4.25e-15!50;UBERON:0006238!4.25e-15!50;UBERON:0000073!4.50e-15!75;UBERON:0001016!4.50e-15!75;UBERON:0001017!6.31e-15!73;UBERON:0005743!6.31e-15!73;UBERON:0002616!1.48e-14!49;UBERON:0000033!1.03e-13!63;UBERON:0002020!1.54e-13!34;UBERON:0003056!3.85e-11!49;UBERON:0002791!7.99e-11!29;UBERON:0003528!7.99e-11!29;UBERON:0001893!7.99e-11!29;UBERON:0000025!8.54e-11!114;UBERON:0003080!9.65e-11!40;UBERON:0004111!3.35e-10!122;UBERON:0002780!3.90e-10!39;UBERON:0001890!3.90e-10!39;UBERON:0006240!3.90e-10!39;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0002619!7.81e-07!17;UBERON:0000956!8.86e-07!21;UBERON:0001869!8.86e-07!21;UBERON:0000203!8.86e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.29e-17,92;UBERON:0000073,2.42e-17,54;UBERON:0001049,5.40e-16,52;UBERON:0005068,5.40e-16,52;UBERON:0006241,5.40e-16,52;UBERON:0007135,5.40e-16,52;UBERON:0002346,1.66e-15,64;UBERON:0003075,1.66e-15,64;UBERON:0007284,1.66e-15,64;UBERON:0004121,1.89e-15,95;UBERON:0000924,1.89e-15,95;UBERON:0006601,1.89e-15,95;UBERON:0001016,4.50e-15,75;UBERON:0001017,6.31e-15,73;UBERON:0010371,3.41e-14,73;UBERON:0002020,1.54e-13,34;UBERON:0000955,3.56e-13,47;UBERON:0006238,3.56e-13,47;UBERON:0002616,1.18e-12,46;UBERON:0003056,3.85e-11,49;UBERON:0003528,7.99e-11,29;UBERON:0002791,7.99e-11,29;UBERON:0001893,7.99e-11,29;UBERON:0000025,8.54e-11,114;UBERON:0003080,9.65e-11,40;UBERON:0004111,3.35e-10,122;UBERON:0002780,3.90e-10,39;UBERON:0001890,3.90e-10,39;UBERON:0006240,3.90e-10,39;UBERON:0002021,3.54e-07,10;UBERON:0000411,3.54e-07,10;UBERON:0001950,3.54e-07,10;UBERON:0002619,7.81e-07,17;UBERON:0000956,8.86e-07,21;UBERON:0001869,8.86e-07,21;UBERON:0000203,8.86e-07,21|phase1_expression=8.96833543786846,4.53668029931169,4.09499315450582,2.11724947914781,3.00537437967808,6.5472916045637,7.94282978024787,11.879345756625,25.2011812651483,23.1723881058774,22.7719897739922,29.4359266692791,15.9216678836021,12.9382195580116,9.66018309265422,5.87178275430495,5.59649502502517,9.62159604342625,9.32378148519024,6.36584477697045,17.093701320365,11.5177503393027,7.05239430675126,7.51964387129011,7.57050627521661,2.29692785646008,7.75371593086335,8.61884930743556,7.41091335879858,5.54466285471848,8.20402889424627,21.5910428976275,15.9916844771988,15.8481681015439,9.53210345179206,9.47537478543406,7.55426618170766,3.76678467663217,3.906676722619,5.23523743973798,2.94115744015507,6.83045484958446,4.36959317728038,18.1291417884831,15.1051627517077,15.0508336772579,17.9950009200049,10.247182349881,15.817405156882,18.0819806139084,10.3589952002768,7.18762821824858,5.36904339384756,9.42970784614748,12.0993767691287,14.663787854049,14.0401385569991,13.9231464914909,27.7173551377649,31.739458756322,34.8607271928399,23.041428180701,14.2287167377782,24.7472422252385,33.6214563272771,20.6039233334369,10.1864037576258,11.1423308543251,13.894408049336,13.6355997715008,13.6711224878398,41.9906947073591,43.2902340265163,13.1065155160001,11.6931474642248,14.7075005857603,95.8008164694682,63.7159817045087,57.9096630376038,40.6209766208997,37.6014215205904,39.068502791757,52.4864038122596,52.3369227329462,46.9090620674807,51.8546310433655,44.277592728521,34.8566963693312,14.6908815066377,15.870027622425,9.85539261585705,9.46466264679525,21.759082678648,25.3660500069774,23.3919510281161,19.2651561451854,15.4488862144927,12.1005529030421,9.61208217030615,7.77347063922748,12.3942209403479,6.41632387071589,10.1922095882658,0,11.0410430915719,12.1612735428047,10.6160133453104,15.0722721229159,11.9111426477699,19.7428044956217,13.8788261412909,22.5304453950985,18.2186242832286,14.4693734930518,20.695612455884,16.7136566468468,22.2475470960936,21.6899035379867,11.4999371753484,14.7207833452142,8.61281921995535,11.6370060752453,20.5030937339934,54.4572282441478,44.6121485512659,13.0283098156382,10.0644704584973,7.7987355029143,6.09937089950711,74.7455290630065,39.8025524452205,23.7486725493314,54.9284851807594,50.8873760087358,68.3622666600953,49.3213439725983,12.4244023897386,8.8328949133166,8.33985102831127,19.3606507415556,15.2240918266363,11.9549094305406,13.8647839950119,15.3718914192429,14.2876648217788,18.1921482804487,13.9615569593996,23.0245999957724,15.5208954911646,10.7790465695657,9.67731182901719,9.64461222681329,13.0682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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22628 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENSMUST00000126192_5end | |||
|cluster_id=chr5:136410427..136410438,- | |||
|description=CAGE_peak_3_at_Ywhag_5end | |||
|id=chr5:136410427..136410438,- | |||
|ontology_enrichment_celltype=CL:0000117!1.44e-08!23;CL:0000337!1.44e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-08,23;CL:0000337,1.44e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.82e-17!102;UBERON:0000924!3.82e-17!102;UBERON:0006601!3.82e-17!102;UBERON:0002346!4.78e-17!71;UBERON:0003075!4.78e-17!71;UBERON:0007284!4.78e-17!71;UBERON:0001049!5.40e-16!52;UBERON:0005068!5.40e-16!52;UBERON:0006241!5.40e-16!52;UBERON:0007135!5.40e-16!52;UBERON:0000955!4.25e-15!50;UBERON:0006238!4.25e-15!50;UBERON:0000073!4.50e-15!75;UBERON:0001016!4.50e-15!75;UBERON:0001017!6.31e-15!73;UBERON:0005743!6.31e-15!73;UBERON:0002616!1.48e-14!49;UBERON:0000033!1.03e-13!63;UBERON:0002020!1.54e-13!34;UBERON:0003056!3.85e-11!49;UBERON:0002791!7.99e-11!29;UBERON:0003528!7.99e-11!29;UBERON:0001893!7.99e-11!29;UBERON:0000025!8.54e-11!114;UBERON:0003080!9.65e-11!40;UBERON:0004111!3.35e-10!122;UBERON:0002780!3.90e-10!39;UBERON:0001890!3.90e-10!39;UBERON:0006240!3.90e-10!39;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0002619!7.81e-07!17;UBERON:0000956!8.86e-07!21;UBERON:0001869!8.86e-07!21;UBERON:0000203!8.86e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.29e-17,92;UBERON:0000073,2.42e-17,54;UBERON:0001049,5.40e-16,52;UBERON:0005068,5.40e-16,52;UBERON:0006241,5.40e-16,52;UBERON:0007135,5.40e-16,52;UBERON:0002346,1.66e-15,64;UBERON:0003075,1.66e-15,64;UBERON:0007284,1.66e-15,64;UBERON:0004121,1.89e-15,95;UBERON:0000924,1.89e-15,95;UBERON:0006601,1.89e-15,95;UBERON:0001016,4.50e-15,75;UBERON:0001017,6.31e-15,73;UBERON:0010371,3.41e-14,73;UBERON:0002020,1.54e-13,34;UBERON:0000955,3.56e-13,47;UBERON:0006238,3.56e-13,47;UBERON:0002616,1.18e-12,46;UBERON:0003056,3.85e-11,49;UBERON:0003528,7.99e-11,29;UBERON:0002791,7.99e-11,29;UBERON:0001893,7.99e-11,29;UBERON:0000025,8.54e-11,114;UBERON:0003080,9.65e-11,40;UBERON:0004111,3.35e-10,122;UBERON:0002780,3.90e-10,39;UBERON:0001890,3.90e-10,39;UBERON:0006240,3.90e-10,39;UBERON:0002021,3.54e-07,10;UBERON:0000411,3.54e-07,10;UBERON:0001950,3.54e-07,10;UBERON:0002619,7.81e-07,17;UBERON:0000956,8.86e-07,21;UBERON:0001869,8.86e-07,21;UBERON:0000203,8.86e-07,21 | |||
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| |||
|short_description=p3@Ywhag | |||
}} |
Latest revision as of 13:40, 25 September 2015
Short description: | p3@Ywhag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ywhag_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -7bp_to_ENSMUST00000126192_5end |
EntrezGene: | Ywhag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-08 | 23 |