FFCP PHASE1:Mm9::chr2:117075461..117075490,+: Difference between revisions
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{{FFCP|EntrezGene=68215|HGNC=|UniProt=Q80VD1|association_with_transcript=0bp_to_ENSMUST00000028825,ENSMUST00000140936,NM_026620,uc008lrk.1_5end|description=CAGE_peak_1_at_Fam98b_5end|id=chr2:117075461..117075490,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.53e-14!94;UBERON:0003056!1.31e-12!49;UBERON:0007811!1.70e-12!86;UBERON:0000033!2.93e-12!63;UBERON:0002346!2.09e-11!71;UBERON:0003075!2.09e-11!71;UBERON:0007284!2.09e-11!71;UBERON:0004121!2.61e-09!102;UBERON:0000924!2.61e-09!102;UBERON:0006601!2.61e-09!102;UBERON:0000475!1.98e-08!200;UBERON:0000955!3.77e-08!50;UBERON:0006238!3.77e-08!50;UBERON:0003080!5.58e-08!40;UBERON:0002616!1.12e-07!49;UBERON:0002780!1.34e-07!39;UBERON:0001890!1.34e-07!39;UBERON:0006240!1.34e-07!39;UBERON:0001049!2.86e-07!52;UBERON:0005068!2.86e-07!52;UBERON:0006241!2.86e-07!52;UBERON:0007135!2.86e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.60e-13,73;UBERON:0003056,1.31e-12,49;UBERON:0010314,5.82e-12,92;UBERON:0002346,1.02e-11,64;UBERON:0003075,1.02e-11,64;UBERON:0007284,1.02e-11,64;UBERON:0004121,2.74e-09,95;UBERON:0000924,2.74e-09,95;UBERON:0006601,2.74e-09,95;UBERON:0000955,2.84e-08,47;UBERON:0006238,2.84e-08,47;UBERON:0003080,5.58e-08,40;UBERON:0002616,8.65e-08,46;UBERON:0002780,1.34e-07,39;UBERON:0001890,1.34e-07,39;UBERON:0006240,1.34e-07,39;UBERON:0001049,2.86e-07,52;UBERON:0005068,2.86e-07,52;UBERON:0006241,2.86e-07,52;UBERON:0007135,2.86e-07,52;UBERON:0000073,4.44e-07,54|phase1_expression=46.4431656603902,12.2141392673776,6.3699893514535,10.5862473957391,9.5170188689806,32.7364580228185,29.4351927150362,21.8218416616264,23.9340827657833,27.6196141059952,36.9830811367091,35.339066434934,22.2560948910567,19.7570109466934,21.9852442798337,20.0450514715928,17.4890469532037,21.293696161681,28.1084588891765,24.6145998042858,23.9822078226017,47.1632018204205,56.680354243149,27.8386815660528,24.0879745120529,16.0784949952206,13.7843838770904,20.2542958724736,26.413255304436,34.5281277771105,28.1597748532237,11.4305521222734,19.0670084151217,15.8481681015439,37.839562187417,39.8963148860382,38.5880083335878,36.412251874111,30.4720784364282,39.2642807980349,24.1174910092716,21.8574555186703,27.6740901227758,26.1865381389201,24.026332699025,28.4497465850606,15.6478268869608,19.8402892306206,25.0442248317298,27.6090456685482,28.1372707466979,30.188038516644,30.0330864843348,21.035502118329,26.5514101322547,26.4977219117025,24.9284092746718,30.4246534443691,39.6540263284812,42.8482693210347,29.7900759647904,12.876092218627,7.11435836888911,12.5985960419396,12.8552627133707,8.5257613793532,14.081205194365,21.5162250980071,52.1558749911643,52.382304072696,54.0535150673052,23.9946826899195,29.154647405613,56.3457676388789,55.6862186615953,23.8996884518605,34.1359231098105,37.1570153827896,40.2449117131358,37.4557057153751,45.7438218012048,43.2358097562111,35.4562408731754,39.3933827022176,47.3674568108111,44.7835449919975,37.8708670925614,37.6526880567107,27.7157867599454,32.0423414852771,17.971598299504,9.46466264679525,18.3592260101093,18.8896117073236,25.9910566979068,21.9533174677694,26.1226621445058,28.9731548382698,55.8539909896168,42.7540885157512,46.6191719460812,29.5150898052931,17.8363667794652,14.2213340630666,48.493993186512,46.364855381943,36.9032844860792,17.5843174767352,55.4127071004947,41.8606832162806,35.9114626405901,36.5358573974569,30.9024766323118,37.8313827787083,37.6283862834255,37.6999773989026,10.6293836125781,36.5836373007376,25.6537060065464,36.5593080881145,30.9178125844551,40.7295212633587,18.6391761218122,49.772735491963,51.9427832897369,30.1439325146138,45.7693775612615,42.5930939005319,43.0768069777689,50.4794454794253,51.2400675156862,62.3245586479807,61.1861607076813,62.3945715886006,45.9211578476628,54.5130643907666,40.5320668124259,31.7237775055737,33.6121268716787,50.2956035568673,75.4698569183682,49.4289524531967,55.6391981098529,62.8439090374932,64.2264551988535,75.4589812477765,58.3761744007111,58.9843685284956,67.2572137950468,57.8664605313527,45.9232434067907,35.2905129208395,48.1021741160284,33.432207986128,38.8928237811013,40.2049218973356,51.2615626738661,48.6387544446812,27.2796959419769,39.5610225542809,44.0908992764461,38.8934052755792,33.8544971886851,39.1560821177334,43.3490587213533,43.4838476683263,42.1189240197402,43.2031766758527,43.6083602270723,40.8776985556947,33.4003495328926,38.8891966551384,45.4468738652475,35.2962881339778,51.1004575010829,65.138619636087,8.26046957459495,24.5939026997096,54.6017921370199,50.3953577937152,40.9798527004257,33.8828321367215,27.3524993929191,23.9684288901825,23.7264530772256,27.3400264841858,26.6415321328286,24.8695590051439,26.7100799353195,30.5598598942435,31.7722933315801,25.6892242498134,32.0538752610708,55.182031590499,48.4643263394246,49.4872726664114,42.2816422025424,42.1516277540815,39.5860722397851,39.8547399544926,35.167715036468,34.0576172424169,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68215 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q80VD1 | |||
|association_with_transcript=0bp_to_ENSMUST00000028825,ENSMUST00000140936,NM_026620,uc008lrk.1_5end | |||
|cluster_id=chr2:117075461..117075490,+ | |||
|description=CAGE_peak_1_at_Fam98b_5end | |||
|id=chr2:117075461..117075490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.53e-14!94;UBERON:0003056!1.31e-12!49;UBERON:0007811!1.70e-12!86;UBERON:0000033!2.93e-12!63;UBERON:0002346!2.09e-11!71;UBERON:0003075!2.09e-11!71;UBERON:0007284!2.09e-11!71;UBERON:0004121!2.61e-09!102;UBERON:0000924!2.61e-09!102;UBERON:0006601!2.61e-09!102;UBERON:0000475!1.98e-08!200;UBERON:0000955!3.77e-08!50;UBERON:0006238!3.77e-08!50;UBERON:0003080!5.58e-08!40;UBERON:0002616!1.12e-07!49;UBERON:0002780!1.34e-07!39;UBERON:0001890!1.34e-07!39;UBERON:0006240!1.34e-07!39;UBERON:0001049!2.86e-07!52;UBERON:0005068!2.86e-07!52;UBERON:0006241!2.86e-07!52;UBERON:0007135!2.86e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.60e-13,73;UBERON:0003056,1.31e-12,49;UBERON:0010314,5.82e-12,92;UBERON:0002346,1.02e-11,64;UBERON:0003075,1.02e-11,64;UBERON:0007284,1.02e-11,64;UBERON:0004121,2.74e-09,95;UBERON:0000924,2.74e-09,95;UBERON:0006601,2.74e-09,95;UBERON:0000955,2.84e-08,47;UBERON:0006238,2.84e-08,47;UBERON:0003080,5.58e-08,40;UBERON:0002616,8.65e-08,46;UBERON:0002780,1.34e-07,39;UBERON:0001890,1.34e-07,39;UBERON:0006240,1.34e-07,39;UBERON:0001049,2.86e-07,52;UBERON:0005068,2.86e-07,52;UBERON:0006241,2.86e-07,52;UBERON:0007135,2.86e-07,52;UBERON:0000073,4.44e-07,54 | |||
|phase1_expression=46.4431656603902,12.2141392673776,6.3699893514535,10.5862473957391,9.5170188689806,32.7364580228185,29.4351927150362,21.8218416616264,23.9340827657833,27.6196141059952,36.9830811367091,35.339066434934,22.2560948910567,19.7570109466934,21.9852442798337,20.0450514715928,17.4890469532037,21.293696161681,28.1084588891765,24.6145998042858,23.9822078226017,47.1632018204205,56.680354243149,27.8386815660528,24.0879745120529,16.0784949952206,13.7843838770904,20.2542958724736,26.413255304436,34.5281277771105,28.1597748532237,11.4305521222734,19.0670084151217,15.8481681015439,37.839562187417,39.8963148860382,38.5880083335878,36.412251874111,30.4720784364282,39.2642807980349,24.1174910092716,21.8574555186703,27.6740901227758,26.1865381389201,24.026332699025,28.4497465850606,15.6478268869608,19.8402892306206,25.0442248317298,27.6090456685482,28.1372707466979,30.188038516644,30.0330864843348,21.035502118329,26.5514101322547,26.4977219117025,24.9284092746718,30.4246534443691,39.6540263284812,42.8482693210347,29.7900759647904,12.876092218627,7.11435836888911,12.5985960419396,12.8552627133707,8.5257613793532,14.081205194365,21.5162250980071,52.1558749911643,52.382304072696,54.0535150673052,23.9946826899195,29.154647405613,56.3457676388789,55.6862186615953,23.8996884518605,34.1359231098105,37.1570153827896,40.2449117131358,37.4557057153751,45.7438218012048,43.2358097562111,35.4562408731754,39.3933827022176,47.3674568108111,44.7835449919975,37.8708670925614,37.6526880567107,27.7157867599454,32.0423414852771,17.971598299504,9.46466264679525,18.3592260101093,18.8896117073236,25.9910566979068,21.9533174677694,26.1226621445058,28.9731548382698,55.8539909896168,42.7540885157512,46.6191719460812,29.5150898052931,17.8363667794652,14.2213340630666,48.493993186512,46.364855381943,36.9032844860792,17.5843174767352,55.4127071004947,41.8606832162806,35.9114626405901,36.5358573974569,30.9024766323118,37.8313827787083,37.6283862834255,37.6999773989026,10.6293836125781,36.5836373007376,25.6537060065464,36.5593080881145,30.9178125844551,40.7295212633587,18.6391761218122,49.772735491963,51.9427832897369,30.1439325146138,45.7693775612615,42.5930939005319,43.0768069777689,50.4794454794253,51.2400675156862,62.3245586479807,61.1861607076813,62.3945715886006,45.9211578476628,54.5130643907666,40.5320668124259,31.7237775055737,33.6121268716787,50.2956035568673,75.4698569183682,49.4289524531967,55.6391981098529,62.8439090374932,64.2264551988535,75.4589812477765,58.3761744007111,58.9843685284956,67.2572137950468,57.8664605313527,45.9232434067907,35.2905129208395,48.1021741160284,33.432207986128,38.8928237811013,40.2049218973356,51.2615626738661,48.6387544446812,27.2796959419769,39.5610225542809,44.0908992764461,38.8934052755792,33.8544971886851,39.1560821177334,43.3490587213533,43.4838476683263,42.1189240197402,43.2031766758527,43.6083602270723,40.8776985556947,33.4003495328926,38.8891966551384,45.4468738652475,35.2962881339778,51.1004575010829,65.138619636087,8.26046957459495,24.5939026997096,54.6017921370199,50.3953577937152,40.9798527004257,33.8828321367215,27.3524993929191,23.9684288901825,23.7264530772256,27.3400264841858,26.6415321328286,24.8695590051439,26.7100799353195,30.5598598942435,31.7722933315801,25.6892242498134,32.0538752610708,55.182031590499,48.4643263394246,49.4872726664114,42.2816422025424,42.1516277540815,39.5860722397851,39.8547399544926,35.167715036468,34.0576172424169,19.5658733877518,34.7037819889476,31.8425572083389,36.2028000939615,22.5174734741238,18.5706413009361,19.8608164389507,18.1248566594011,26.9144476446559,31.5745625166294,56.0696005456683,26.7941482321322,30.5796919652269,27.025939940341,29.9593680581593,24.1221760681684,33.0708210398222,42.2565848248181,51.9858274850063,57.0343488204632,62.1929157964531,37.1863891520831,33.3261097240419,28.2943789393808,47.9210838082821,42.299755722916,32.2098632688124,29.9869865929801,34.5369963731791,31.099547595025,24.1266054302836,29.914812610029,33.4399705652945,31.7327258250442,44.9541651965817,43.3683240391152,48.6886787768726,30.2965112645248,37.2299698911183,40.6056294068504,41.792139160163,37.0401636826456,33.1970024382767,25.1938112402061,38.457016659115,35.9474705230914,36.7617633490267,60.4084074872997,35.910841557692,34.7227927151148,37.4640006513225,37.1182776688205,33.1862845849907,50.4983723202361,40.2090330763119,41.1159073867858,24.8053590019849,31.0509499423367,28.9439688348408,39.6251765130481,36.7192299736263,26.2310509086727,29.5172104009997,27.8465966770104,51.0659408630682,62.8413218169273,55.4948753428017,50.5835402674558,46.1084607469911,49.4081624757735,45.0864316449811,35.3179340972935,22.0591405579888,19.2767184486076,22.934953397716,46.6628095824389,42.788073074415,48.0694011677402,51.2107355773455,44.6463247306567,34.9777003955821,41.5352676503542,32.9780799939856,41.8965341965342,44.6318810961005,39.7457444279898,41.4183509994706,34.7742823273914,48.1038956882611,54.8609693108739,46.1587912506775,26.7307773044232,42.3890231398721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| |||
|short_description=p1@Fam98b | |||
}} |
Latest revision as of 13:30, 25 September 2015
Short description: | p1@Fam98b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam98b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028825, ENSMUST00000140936, NM_026620, uc008lrk.1_5end |
EntrezGene: | Fam98b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.60e-13 | 73 |
pre-chordal neural plate | 1.31e-12 | 49 |
structure with developmental contribution from neural crest | 5.82e-12 | 92 |
neurectoderm | 1.02e-11 | 64 |
neural plate | 1.02e-11 | 64 |
presumptive neural plate | 1.02e-11 | 64 |
ectoderm-derived structure | 2.74e-09 | 95 |
ectoderm | 2.74e-09 | 95 |
presumptive ectoderm | 2.74e-09 | 95 |
brain | 2.84e-08 | 47 |
future brain | 2.84e-08 | 47 |
anterior neural tube | 5.58e-08 | 40 |
regional part of brain | 8.65e-08 | 46 |
regional part of forebrain | 1.34e-07 | 39 |
forebrain | 1.34e-07 | 39 |
future forebrain | 1.34e-07 | 39 |
neural tube | 2.86e-07 | 52 |
neural rod | 2.86e-07 | 52 |
future spinal cord | 2.86e-07 | 52 |
neural keel | 2.86e-07 | 52 |
regional part of nervous system | 4.44e-07 | 54 |