FFCP PHASE1:Hg19::chr5:142814347..142814358,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000503701_5end | |association_with_transcript=-8bp_to_ENST00000503701_5end | ||
|cluster_id=chr5:142814347..142814358,- | |||
|description=CAGE_peak_27_at_NR3C1_5end | |description=CAGE_peak_27_at_NR3C1_5end | ||
|id=chr5:142814347..142814358,- | |id=chr5:142814347..142814358,- | ||
|ontology_enrichment_celltype=CL:0000738!8.05e-58!140;CL:0002087!8.73e-53!119;CL:0002031!5.90e-49!124;CL:0000037!9.76e-45!172;CL:0000566!9.76e-45!172;CL:0000988!6.60e-44!182;CL:0002032!1.20e-38!165;CL:0000837!1.20e-38!165;CL:0002057!9.58e-32!42;CL:0000860!9.99e-29!45;CL:0000766!1.67e-26!76;CL:0002194!2.90e-26!63;CL:0000576!2.90e-26!63;CL:0000040!2.90e-26!63;CL:0000559!2.90e-26!63;CL:0000839!1.12e-25!70;CL:0000557!4.28e-25!71;CL:0002009!5.32e-25!65;CL:0000838!4.05e-23!52;CL:0000542!1.94e-22!53;CL:0000051!1.94e-22!53;CL:0000763!6.63e-17!112;CL:0000049!6.63e-17!112;CL:0000791!6.33e-14!18;CL:0000789!6.33e-14!18;CL:0002420!6.33e-14!18;CL:0002419!6.33e-14!18;CL:0000790!6.33e-14!18;CL:0000084!5.13e-13!25;CL:0000827!5.13e-13!25;CL:0000945!3.62e-12!24;CL:0000826!3.62e-12!24;CL:0000134!7.71e-11!358;CL:0002320!4.09e-10!365;CL:0002393!5.79e-09!9;CL:0002397!5.79e-09!9;CL:0000625!7.34e-09!11;CL:0000624!5.70e-08!6;CL:0000219!1.19e-07!390 | |ontology_enrichment_celltype=CL:0000738!8.05e-58!140;CL:0002087!8.73e-53!119;CL:0002031!5.90e-49!124;CL:0000037!9.76e-45!172;CL:0000566!9.76e-45!172;CL:0000988!6.60e-44!182;CL:0002032!1.20e-38!165;CL:0000837!1.20e-38!165;CL:0002057!9.58e-32!42;CL:0000860!9.99e-29!45;CL:0000766!1.67e-26!76;CL:0002194!2.90e-26!63;CL:0000576!2.90e-26!63;CL:0000040!2.90e-26!63;CL:0000559!2.90e-26!63;CL:0000839!1.12e-25!70;CL:0000557!4.28e-25!71;CL:0002009!5.32e-25!65;CL:0000838!4.05e-23!52;CL:0000542!1.94e-22!53;CL:0000051!1.94e-22!53;CL:0000763!6.63e-17!112;CL:0000049!6.63e-17!112;CL:0000791!6.33e-14!18;CL:0000789!6.33e-14!18;CL:0002420!6.33e-14!18;CL:0002419!6.33e-14!18;CL:0000790!6.33e-14!18;CL:0000084!5.13e-13!25;CL:0000827!5.13e-13!25;CL:0000945!3.62e-12!24;CL:0000826!3.62e-12!24;CL:0000134!7.71e-11!358;CL:0002320!4.09e-10!365;CL:0002393!5.79e-09!9;CL:0002397!5.79e-09!9;CL:0000625!7.34e-09!11;CL:0000624!5.70e-08!6;CL:0000219!1.19e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000784;6.32e-16;3!CL:0000473;1.25e-12;39!CL:0000234;1.25e-12;39!CL:0000791;7.53e-12;18!CL:0000789;7.53e-12;18!CL:0002419;7.53e-12;18!CL:0000084;7.89e-11;25!CL:0000625;1.46e-10;11!CL:0000542;1.31e-09;53!CL:0000860;2.67e-09;33!CL:0002057;2.67e-09;33!CL:0000235;8.50e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.44e-28,136;CL:0002087,1.37e-27,115;CL:0002031,3.59e-24,120;CL:0000037,1.21e-21,168;CL:0000988,3.40e-20,177;CL:0002032,6.87e-18,161;CL:0000837,6.87e-18,161;CL:0000784,5.10e-16,3;CL:0000838,1.25e-14,52;CL:0000542,2.70e-14,53;CL:0000051,2.70e-14,53;CL:0000473,9.45e-14,48;CL:0000234,9.45e-14,48;CL:0002194,2.41e-12,59;CL:0000576,2.41e-12,59;CL:0000040,2.41e-12,59;CL:0000559,2.41e-12,59;CL:0000791,5.70e-12,18;CL:0000789,5.70e-12,18;CL:0002420,5.70e-12,18;CL:0002419,5.70e-12,18;CL:0000790,5.70e-12,18;CL:0002009,7.53e-12,61;CL:0000766,3.83e-11,72;CL:0000084,6.89e-11,25;CL:0000827,6.89e-11,25;CL:0000839,9.62e-11,66;CL:0000625,1.20e-10,11;CL:0000557,1.53e-10,67;CL:0000860,3.09e-09,42;CL:0002057,3.09e-09,42;CL:0000134,6.19e-09,354;CL:0002320,1.28e-08,361;CL:0000235,7.86e-08,6;CL:0000219,1.66e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;7.53e-12;18!CL:0000051;1.31e-09;53!CL:0002057;9.75e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-29!102;UBERON:0003061!1.25e-29!102;UBERON:0002193!2.16e-26!112;UBERON:0002371!1.23e-21!80;UBERON:0002405!2.76e-20!115;UBERON:0001474!4.67e-19!86;UBERON:0004765!8.45e-15!101;UBERON:0001434!8.45e-15!101;UBERON:0002384!1.62e-09!375;UBERON:0007023!3.32e-09!115;UBERON:0000178!1.54e-07!15;UBERON:0000179!1.54e-07!15;UBERON:0000463!1.54e-07!15;UBERON:0003081!3.59e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!1.25e-29!102;UBERON:0003061!1.25e-29!102;UBERON:0002193!2.16e-26!112;UBERON:0002371!1.23e-21!80;UBERON:0002405!2.76e-20!115;UBERON:0001474!4.67e-19!86;UBERON:0004765!8.45e-15!101;UBERON:0001434!8.45e-15!101;UBERON:0002384!1.62e-09!375;UBERON:0007023!3.32e-09!115;UBERON:0000178!1.54e-07!15;UBERON:0000179!1.54e-07!15;UBERON:0000463!1.54e-07!15;UBERON:0003081!3.59e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.87e-11,98;UBERON:0003061,2.87e-11,98;UBERON:0002193,7.14e-10,108;UBERON:0002371,5.74e-09,76;UBERON:0002384,3.46e-08,371;UBERON:0001474,4.12e-08,82;UBERON:0002405,5.32e-08,93;UBERON:0004765,3.77e-07,90 | |||
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|short_description=p27@NR3C1 | |short_description=p27@NR3C1 | ||
}} | }} |
Latest revision as of 07:42, 25 September 2015
Short description: | p27@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000503701_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.87e-11 | 98 |
blood island | 2.87e-11 | 98 |
hemolymphoid system | 7.14e-10 | 108 |
bone marrow | 5.74e-09 | 76 |
connective tissue | 3.46e-08 | 371 |
bone element | 4.12e-08 | 82 |
immune system | 5.32e-08 | 93 |
skeletal element | 3.77e-07 | 90 |