FFCP PHASE1:Hg19::chr5:142782823..142782854,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:142782823..142782854,- to FFCP PHASE1:Hg19::chr5:142782823..142782854,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000415690_5end | |||
|cluster_id=chr5:142782823..142782854,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_NR3C1_5end | |||
|id=chr5:142782823..142782854,- | |||
|ontology_enrichment_celltype=CL:0000738!7.61e-54!140;CL:0000037!7.25e-49!172;CL:0000566!7.25e-49!172;CL:0002032!3.52e-45!165;CL:0000837!3.52e-45!165;CL:0002031!6.45e-45!124;CL:0000988!6.87e-45!182;CL:0002087!4.50e-43!119;CL:0000766!4.72e-34!76;CL:0000557!3.80e-30!71;CL:0000763!1.33e-28!112;CL:0000049!1.33e-28!112;CL:0000839!1.34e-27!70;CL:0002009!2.61e-27!65;CL:0002194!2.43e-26!63;CL:0000576!2.43e-26!63;CL:0000040!2.43e-26!63;CL:0000559!2.43e-26!63;CL:0002057!4.90e-26!42;CL:0000860!1.09e-24!45;CL:0000134!2.35e-18!358;CL:0002320!1.54e-16!365;CL:0000838!1.96e-15!52;CL:0000542!1.33e-14!53;CL:0000051!1.33e-14!53;CL:0000219!1.51e-12!390;CL:0000945!7.35e-11!24;CL:0000826!7.35e-11!24;CL:0000048!8.38e-10!430;CL:0000034!3.44e-09!444;CL:0000723!4.37e-09!436;CL:0000236!1.41e-07!14;CL:0000094!6.54e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-27;33!CL:0002057;1.62e-27;33!CL:0000473;5.87e-26;39!CL:0000234;5.87e-26;39!CL:0000576;4.50e-23;48!CL:0000766;1.97e-21;69!CL:0002087;7.09e-16;104!CL:0000738;5.48e-15;136!CL:0000945;1.67e-14;24!CL:0000763;3.20e-11;100!CL:0000236;1.04e-09;13!CL:0000542;1.73e-09;53!CL:0000988;1.76e-09;177!CL:0000094;2.05e-09;8!CL:0000219;1.77e-07;193!CL:0000081;1.88e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.07e-70,136;CL:0000037,2.03e-61,168;CL:0002031,5.80e-59,120;CL:0000988,4.25e-58,177;CL:0002032,1.06e-56,161;CL:0000837,1.06e-56,161;CL:0002087,2.66e-56,115;CL:0000766,2.84e-50,72;CL:0000557,1.86e-44,67;CL:0000839,3.18e-41,66;CL:0000473,7.23e-41,48;CL:0000234,7.23e-41,48;CL:0002009,2.74e-40,61;CL:0002194,7.29e-39,59;CL:0000576,7.29e-39,59;CL:0000040,7.29e-39,59;CL:0000559,7.29e-39,59;CL:0000763,1.43e-38,108;CL:0000049,1.43e-38,108;CL:0000860,2.12e-37,42;CL:0002057,2.12e-37,42;CL:0000134,4.20e-19,354;CL:0002320,8.06e-18,361;CL:0000838,4.34e-16,52;CL:0000542,1.62e-15,53;CL:0000051,1.62e-15,53;CL:0000945,3.74e-15,24;CL:0000826,3.74e-15,24;CL:0000219,1.18e-14,386;CL:0000236,2.31e-10,14;CL:0000034,2.01e-09,441;CL:0000094,2.17e-09,8;CL:0000048,2.18e-09,427;CL:0000723,4.99e-09,433;CL:0002393,1.24e-08,9;CL:0002397,1.24e-08,9;CL:0000081,1.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.29e-27;42!CL:0000049;1.88e-10;108!CL:0000051;1.73e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-37!102;UBERON:0003061!3.79e-37!102;UBERON:0002193!6.50e-31!112;UBERON:0002371!4.57e-27!80;UBERON:0001474!2.60e-24!86;UBERON:0004765!2.06e-19!101;UBERON:0001434!2.06e-19!101;UBERON:0002405!1.79e-16!115;UBERON:0002384!7.55e-16!375;UBERON:0003081!8.32e-09!216;UBERON:0000178!1.56e-08!15;UBERON:0000179!1.56e-08!15;UBERON:0000463!1.56e-08!15;UBERON:0002204!2.12e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-10;15!UBERON:0000179;1.53e-10;15!UBERON:0000463;1.53e-10;15!UBERON:0002390;1.21e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.77e-52,98;UBERON:0003061,9.77e-52,98;UBERON:0002193,8.67e-45,108;UBERON:0002371,5.93e-39,76;UBERON:0002405,6.32e-35,93;UBERON:0001474,3.92e-34,82;UBERON:0004765,9.09e-29,90;UBERON:0001434,3.59e-25,100;UBERON:0002384,6.37e-17,371;UBERON:0003081,9.96e-17,203;UBERON:0000178,1.22e-10,15;UBERON:0000179,1.22e-10,15;UBERON:0000463,1.22e-10,15;UBERON:0002204,5.60e-09,167 | |||
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| ||
|short_description=p3@NR3C1 | |||
}} | }} |
Latest revision as of 07:41, 25 September 2015
Short description: | p3@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR3C1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 39bp_to_ENST00000415690_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.77e-52 | 98 |
blood island | 9.77e-52 | 98 |
hemolymphoid system | 8.67e-45 | 108 |
bone marrow | 5.93e-39 | 76 |
immune system | 6.32e-35 | 93 |
bone element | 3.92e-34 | 82 |
skeletal element | 9.09e-29 | 90 |
skeletal system | 3.59e-25 | 100 |
connective tissue | 6.37e-17 | 371 |
lateral plate mesoderm | 9.96e-17 | 203 |
blood | 1.22e-10 | 15 |
haemolymphatic fluid | 1.22e-10 | 15 |
organism substance | 1.22e-10 | 15 |
musculoskeletal system | 5.60e-09 | 167 |