FFCP PHASE1:Hg19::chr5:142780237..142780261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | ||
|association_with_transcript=142bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |association_with_transcript=142bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | ||
|cluster_id=chr5:142780237..142780261,- | |||
|coexpression_cluster_id=C4472 | |coexpression_cluster_id=C4472 | ||
|description=CAGE_peak_7_at_NR3C1_5end | |description=CAGE_peak_7_at_NR3C1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.82e-09!57;UBERON:0005068!1.82e-09!57;UBERON:0006241!1.82e-09!57;UBERON:0007135!1.82e-09!57;UBERON:0000955!3.36e-09!69;UBERON:0006238!3.36e-09!69;UBERON:0002616!5.51e-09!59;UBERON:0003080!1.10e-08!42;UBERON:0002780!2.01e-08!41;UBERON:0001890!2.01e-08!41;UBERON:0006240!2.01e-08!41;UBERON:0001950!5.17e-08!20;UBERON:0001893!7.69e-08!34;UBERON:0001017!1.77e-07!82;UBERON:0002619!2.12e-07!22;UBERON:0002791!2.66e-07!33;UBERON:0001869!4.64e-07!32;UBERON:0005743!6.32e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!1.82e-09!57;UBERON:0005068!1.82e-09!57;UBERON:0006241!1.82e-09!57;UBERON:0007135!1.82e-09!57;UBERON:0000955!3.36e-09!69;UBERON:0006238!3.36e-09!69;UBERON:0002616!5.51e-09!59;UBERON:0003080!1.10e-08!42;UBERON:0002780!2.01e-08!41;UBERON:0001890!2.01e-08!41;UBERON:0006240!2.01e-08!41;UBERON:0001950!5.17e-08!20;UBERON:0001893!7.69e-08!34;UBERON:0001017!1.77e-07!82;UBERON:0002619!2.12e-07!22;UBERON:0002791!2.66e-07!33;UBERON:0001869!4.64e-07!32;UBERON:0005743!6.32e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.97e-12;20!UBERON:0002619;1.52e-10;22!UBERON:0000200;4.93e-09;6!UBERON:0000956;7.39e-09;25!UBERON:0000203;7.39e-09;25!UBERON:0001893;1.16e-08;34!UBERON:0001869;2.09e-07;32!UBERON:0002791;5.46e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001950;5.97e-12;20!UBERON:0002619;1.52e-10;22!UBERON:0000200;4.93e-09;6!UBERON:0000956;7.39e-09;25!UBERON:0000203;7.39e-09;25!UBERON:0001893;1.16e-08;34!UBERON:0001869;2.09e-07;32!UBERON:0002791;5.46e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.70e-12,20;UBERON:0002619,1.46e-10,22;UBERON:0001893,1.24e-09,34;UBERON:0000200,4.75e-09,6;UBERON:0002780,5.15e-09,41;UBERON:0001890,5.15e-09,41;UBERON:0003080,5.15e-09,41;UBERON:0006240,5.15e-09,41;UBERON:0000955,5.60e-09,68;UBERON:0006238,5.60e-09,68;UBERON:0000956,7.13e-09,25;UBERON:0000203,7.13e-09,25;UBERON:0000073,1.37e-08,53;UBERON:0002616,1.37e-08,53;UBERON:0001869,2.64e-08,32;UBERON:0002791,3.71e-08,32;UBERON:0001049,8.30e-08,56;UBERON:0005068,8.30e-08,56;UBERON:0006241,8.30e-08,56;UBERON:0007135,8.30e-08,56;UBERON:0003528,1.93e-07,34;UBERON:0002020,1.93e-07,34;UBERON:0001017,5.12e-07,81 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.704772020479856,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0,0,19.6382452772235,13.4644966697911,15.0337592309127,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.822335776043652,0,0,0.768482119587302,0,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,1.13477044938228,1.24564449799115,0.75374599577023,0,0,1.81619850790011,1.47311054395026,0.949387162322653,0.422510572623884,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,1.17903228824749,1.23360899399706,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0,0,0.493313713811028,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0.383587685530591,0.722878304769133,0,0.724232594804119,1.5905718941022,0.973269740605272,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,2.02608818663328,1.58891016975863,2.0078563452417,0.709336764396714,1.12135520028461,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0.454072282934794,2.88087962239999,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.413303124703062,0,0.741800787835671,0,0,0,0.250237039743928,0,0.877955241761676,0.612975591598039,0.300476117813194,0.680593098960126,0.179389635688862,0.85422955527427,4.87443372666992,3.60109315301283,3.19462840639161,1.28820270022815,0.744467425326359,2.70042131586026,1.16924406193438,1.00973509697646,2.85354685791128,0.80823028409406,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,1.56449532329816,0,0,0,0,0.473227200159376,0.674338760312407,0.723033089650446,0.992645754591546,1.52515610864684,0.71181185733329,0.674156540800822,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,2.86587272649115,1.74380363108377,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.4400297149257,8.14411809274,0,0,0,0,0,0,0,0.57191197463259,6.51145926469732,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0.224170287987055,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0.623912584592421,0.713715955188647,0.473107245101804,1.05427273493442,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,0,0.30239029332968,0.744323423456331,0.61384789315225,1.12264037773229,0.640695746278505,3.07024349440022,1.44768529029247,0,2.15893571323718,2.13074070375753,0.657017248110473,2.07701771673448,1.97557643381931,0,0,0.0920809889358963,0,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.9273691048295,0,0,0,0.650060246036521,1.6068392984416,0.676695028044854,0.308097234229289,0,0.275673144969061,0.429680979473094,0.145016693914229,0.255679882248303,0.178064071293475,0,0,0.382838137483752,0,0.464845549297286,2.20368642781448,0,1.54016790088044,1.59691809095107,0,0.55597265731176,1.86062352764589,0.372158369359667,0,0,0,0,0.636406495851874,0.78494864019923,0,0.54907405947211,0,0.404364963146632,0,0.421258456238981,0,1.70599442741899,3.16950440270266,0.272999822815972,0.282810863907425,1.13008116620243,1.65409603063837,2.65375590096488,0.876901770507525,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0,1.47775344708365,0.329294892959902,0,0,0.192444225451024,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,4.32807638929335,1.20941133692304,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,2.07875276582847,0.307160702099232,0.994147647766298,0.281338832821026,0,0.16480387422676,0,0.19924798825107,0.828851746593443,0.251932747854276,2.0453736500431,13.0469893788734,0,0.0898683511473268,2.32727527078292,0,0.197286811273867,0,0,0,1.57705766875147,0,0,0.699679999969566,0.724999575434793,0,1.27126825146383,0.236387681767936,0,0,0,0,0.120596438625408,6.10326945268333,3.09621927807429,4.72876190325676,1.31631238292384,0.980446171670911,0,0.153900517007594,3.07643550786903,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,7.70954934569617,9.14373148204121,9.18913155648007,1.01101699471016,0.802577647298789,1.1713222286267,0,0,0,0,0,0.91821828489147,0.758238955541855,0.60129367765797,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.587954384486266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| ||
|short_description=p7@NR3C1 | |short_description=p7@NR3C1 | ||
}} | }} |
Latest revision as of 07:41, 25 September 2015
Short description: | p7@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NR3C1_5end |
Coexpression cluster: | C4472_renal_B_splenic_b_xeroderma_Mesenchymal_cord |
Association with transcript: | 142bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 5.70e-12 | 20 |
regional part of cerebral cortex | 1.46e-10 | 22 |
telencephalon | 1.24e-09 | 34 |
gyrus | 4.75e-09 | 6 |
regional part of forebrain | 5.15e-09 | 41 |
forebrain | 5.15e-09 | 41 |
anterior neural tube | 5.15e-09 | 41 |
future forebrain | 5.15e-09 | 41 |
brain | 5.60e-09 | 68 |
future brain | 5.60e-09 | 68 |
cerebral cortex | 7.13e-09 | 25 |
pallium | 7.13e-09 | 25 |
regional part of nervous system | 1.37e-08 | 53 |
regional part of brain | 1.37e-08 | 53 |
cerebral hemisphere | 2.64e-08 | 32 |
regional part of telencephalon | 3.71e-08 | 32 |
neural tube | 8.30e-08 | 56 |
neural rod | 8.30e-08 | 56 |
future spinal cord | 8.30e-08 | 56 |
neural keel | 8.30e-08 | 56 |
brain grey matter | 1.93e-07 | 34 |
gray matter | 1.93e-07 | 34 |
central nervous system | 5.12e-07 | 81 |