FFCP PHASE1:Hg19::chr5:142779999..142780026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | ||
|association_with_transcript=377bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |association_with_transcript=377bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | ||
|cluster_id=chr5:142779999..142780026,- | |||
|description=CAGE_peak_20_at_NR3C1_5end | |description=CAGE_peak_20_at_NR3C1_5end | ||
|id=chr5:142779999..142780026,- | |id=chr5:142779999..142780026,- | ||
|ontology_enrichment_celltype=CL:0002087!5.54e-07!119 | |ontology_enrichment_celltype=CL:0002087!5.54e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.23e-15;24!CL:0002032;3.58e-09;1!CL:0000557;3.58e-09;1!CL:0000946;7.26e-09;1!CL:0002568;7.26e-09;1!CL:0000786;7.26e-09;1 | |ontology_enrichment_celltype_v019=CL:0000945;3.23e-15;24!CL:0002032;3.58e-09;1!CL:0000557;3.58e-09;1!CL:0000946;7.26e-09;1!CL:0002568;7.26e-09;1!CL:0000786;7.26e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.27e-15,24;CL:0000826,3.27e-15,24;CL:0002568,5.75e-09,1;CL:0000946,7.27e-09,1;CL:0000786,7.27e-09,1;CL:0000980,7.27e-09,1;CL:0000988,4.61e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.67e-09;1!DOID:0050177;1.67e-09;1!DOID:0050427;1.67e-09;1!DOID:2355;2.60e-09;1 | |ontology_enrichment_disease_v019=DOID:630;1.67e-09;1!DOID:0050177;1.67e-09;1!DOID:0050427;1.67e-09;1!DOID:2355;2.60e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.74e-09,1;DOID:0050177,1.74e-09,1;DOID:0050427,1.74e-09,1;DOID:2355,2.82e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.67e-13;10!UBERON:0001282;7.26e-09;1!UBERON:0009842;7.26e-09;1!UBERON:0003704;7.26e-09;1!UBERON:0001171;7.26e-09;1!UBERON:0001172;7.26e-09;1!UBERON:0000478;5.88e-08;24 | |ontology_enrichment_uberon_v019=UBERON:0002331;8.67e-13;10!UBERON:0001282;7.26e-09;1!UBERON:0009842;7.26e-09;1!UBERON:0003704;7.26e-09;1!UBERON:0001171;7.26e-09;1!UBERON:0001172;7.26e-09;1!UBERON:0000478;5.88e-08;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.23e-13,10;UBERON:0000358,7.23e-13,10;UBERON:0000307,7.23e-13,10;UBERON:0000091,7.23e-13,10;UBERON:0000087,7.23e-13,10;UBERON:0007010,7.23e-13,10;UBERON:0007806,7.23e-13,10;UBERON:0008780,7.23e-13,10;UBERON:0005728,7.23e-13,10;UBERON:0001282,1.16e-08,1;UBERON:0009842,1.16e-08,1;UBERON:0003704,1.16e-08,1;UBERON:0001171,1.16e-08,1;UBERON:0001172,1.16e-08,1;UBERON:0000478,5.21e-08,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43860325865781,2.05251473624864,1.81034797021462,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0.727752183563449,0,0,0.929119112685311,0,0,0.236482229888585,0.689491361473237,0,0,0.376484679085209,0,0.224723484445085,0.918251677112708,0.962787081228281,0.639337125799041,0,0,0,0.580418477257168,0,1.86846674698672,0,0.521482918420201,0,1.21079900526674,0.368277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.847727604638247,0,0.412210116953756,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.871901815541886,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,1.99267679560631,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0.828851746593443,0,0.20453736500431,4.06179858021529,0.311039587661807,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,0,1.02547850262301,0,0,0.108647371922008,0,0,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,4.74433805888995,2.71840665682306,4.17687798021822,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0.387025325156341,0.219267951258557,0.164230914106418,0.193978032976839,0,0,0.685209623233754,0.397429223405979,0.0633107959558787,0.977756913674015,0.160317640503067,0.426905989478705,0,0,0,0.171594997861965,0.576219191952599,0,0.942776138467182,0,0,0.305994652908965,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0.0674035438541849,0,3.21758661849981,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0.906496732161005,0,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0.730755590285376,0,0,0.2506898940227,0.612691153526923,0,0,0,0.244052529803926,0.250381861413,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0.701139929541673,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0.466311601748341,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,1.03018711554838,0.673498977531838,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0.463044948647668,0.97894681802587,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.79994958341972,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,2.68129933004261,0,0.352675943690684,0,0.128458450192919,0,0.319267718114302,0,0,0.414943514785307,0.161475645631851,0,0.294443155503077,0.353909170043221,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.443910671357348,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.443511850813194,1.38280785066935,0.171488009437418,0.2039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|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43860325865781,2.05251473624864,1.81034797021462,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0.727752183563449,0,0,0.929119112685311,0,0,0.236482229888585,0.689491361473237,0,0,0.376484679085209,0,0.224723484445085,0.918251677112708,0.962787081228281,0.639337125799041,0,0,0,0.580418477257168,0,1.86846674698672,0,0.521482918420201,0,1.21079900526674,0.368277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.847727604638247,0,0.412210116953756,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.871901815541886,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,1.99267679560631,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0.828851746593443,0,0.20453736500431,4.06179858021529,0.311039587661807,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,0,1.02547850262301,0,0,0.108647371922008,0,0,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,4.74433805888995,2.71840665682306,4.17687798021822,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0.387025325156341,0.219267951258557,0.164230914106418,0.193978032976839,0,0,0.685209623233754,0.397429223405979,0.0633107959558787,0.977756913674015,0.160317640503067,0.426905989478705,0,0,0,0.171594997861965,0.576219191952599,0,0.942776138467182,0,0,0.305994652908965,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0.0674035438541849,0,3.21758661849981,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0.906496732161005,0,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0.730755590285376,0,0,0.2506898940227,0.612691153526923,0,0,0,0.244052529803926,0.250381861413,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0.701139929541673,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0.466311601748341,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,1.03018711554838,0.673498977531838,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0.463044948647668,0.97894681802587,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.79994958341972,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,2.68129933004261,0,0.352675943690684,0,0.128458450192919,0,0.319267718114302,0,0,0.414943514785307,0.161475645631851,0,0.294443155503077,0.353909170043221,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.443910671357348,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.443511850813194,1.38280785066935,0.171488009437418,0.2039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| ||
|short_description=p20@NR3C1 | |short_description=p20@NR3C1 | ||
}} | }} |
Latest revision as of 07:41, 25 September 2015
Short description: | p20@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 377bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.27e-15 | 24 |
pro-B cell | 3.27e-15 | 24 |
mesenchymal stem cell of Wharton's jelly | 5.75e-09 | 1 |
antibody secreting cell | 7.27e-09 | 1 |
plasma cell | 7.27e-09 | 1 |
plasmablast | 7.27e-09 | 1 |
hematopoietic cell | 4.61e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.23e-13 | 10 |
blastocyst | 7.23e-13 | 10 |
blastula | 7.23e-13 | 10 |
bilaminar disc | 7.23e-13 | 10 |
inner cell mass | 7.23e-13 | 10 |
cleaving embryo | 7.23e-13 | 10 |
connecting stalk | 7.23e-13 | 10 |
inner cell mass derived epiblast | 7.23e-13 | 10 |
extraembryonic mesoderm | 7.23e-13 | 10 |
intralobular bile duct | 1.16e-08 | 1 |
acinus | 1.16e-08 | 1 |
intrahepatic bile duct | 1.16e-08 | 1 |
portal lobule | 1.16e-08 | 1 |
hepatic acinus | 1.16e-08 | 1 |
extraembryonic structure | 5.21e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.74e-09 | 1 |
monogenic disease | 1.74e-09 | 1 |
xeroderma pigmentosum | 1.74e-09 | 1 |
anemia | 2.82e-09 | 1 |