FFCP PHASE1:Hg19::chr17:46800319..46800343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84366 | |EntrezGene=84366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30591 | |HGNC=30591 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KF2 | |UniProt=Q96KF2 | ||
|association_with_transcript=-435bp_to_ENST00000290294_5end | |association_with_transcript=-435bp_to_ENST00000290294_5end | ||
|cluster_id=chr17:46800319..46800343,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_2_at_PRAC_5end | |description=CAGE_peak_2_at_PRAC_5end | ||
|id=chr17:46800319..46800343,- | |id=chr17:46800319..46800343,- | ||
|ontology_enrichment_celltype=CL:0002231!3.87e-14!3;CL:0002566!6.00e-11!1 | |ontology_enrichment_celltype=CL:0002231!3.87e-14!3;CL:0002566!6.00e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.54e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.09e-10;3!UBERON:0003353;1.09e-10;3 | |||
|ontology_enrichment_disease=DOID:3095!2.15e-28!22;DOID:2994!2.15e-28!22;DOID:171!1.72e-25!10;DOID:0050687!2.90e-08!143 | |ontology_enrichment_disease=DOID:3095!2.15e-28!22;DOID:2994!2.15e-28!22;DOID:171!1.72e-25!10;DOID:0050687!2.90e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:171;1.57e-45;10!DOID:3095;4.38e-21;22!DOID:2994;4.38e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.40e-45,10;DOID:3095,4.16e-21,22;DOID:2994,4.16e-21,22;DOID:0050687,2.51e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003101!3.48e-11!22;UBERON:0000079!3.48e-11!22;UBERON:0002367!9.89e-09!11;UBERON:0010147!9.89e-09!11;UBERON:0009846!9.89e-09!11;UBERON:0003353!9.89e-09!11;UBERON:0004902!9.89e-09!11;UBERON:0003820!9.89e-09!11;UBERON:0009847!9.89e-09!11;UBERON:0003937!4.81e-08!12;UBERON:0005399!4.81e-08!12;UBERON:0000162!5.80e-07!14;UBERON:0001353!5.80e-07!14;UBERON:0000163!5.80e-07!14;UBERON:0006866!5.80e-07!14;UBERON:0000164!5.80e-07!14;UBERON:0000931!5.80e-07!14 | |ontology_enrichment_uberon=UBERON:0003101!3.48e-11!22;UBERON:0000079!3.48e-11!22;UBERON:0002367!9.89e-09!11;UBERON:0010147!9.89e-09!11;UBERON:0009846!9.89e-09!11;UBERON:0003353!9.89e-09!11;UBERON:0004902!9.89e-09!11;UBERON:0003820!9.89e-09!11;UBERON:0009847!9.89e-09!11;UBERON:0003937!4.81e-08!12;UBERON:0005399!4.81e-08!12;UBERON:0000162!5.80e-07!14;UBERON:0001353!5.80e-07!14;UBERON:0000163!5.80e-07!14;UBERON:0006866!5.80e-07!14;UBERON:0000164!5.80e-07!14;UBERON:0000931!5.80e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.88e-64;4!UBERON:0000923;6.88e-64;4!UBERON:0010316;6.88e-64;4!UBERON:0005291;6.88e-64;4!UBERON:0002050;2.51e-51;5!UBERON:0005423;2.51e-51;5!UBERON:0000013;5.54e-07;5!UBERON:0002410;5.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.38e-07,5;UBERON:0002410,5.38e-07,5 | |||
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|short_description=p2@PRAC | |short_description=p2@PRAC | ||
}} | }} |
Latest revision as of 07:40, 25 September 2015
Short description: | p2@PRAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRAC_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -435bp_to_ENST00000290294_5end |
EntrezGene: | PRAC |
HGNC: | 30591 |
UniProt: | Q96KF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.38e-07 | 5 |
autonomic nervous system | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.40e-45 | 10 |
germ cell and embryonal cancer | 4.16e-21 | 22 |
germ cell cancer | 4.16e-21 | 22 |
cell type cancer | 2.51e-07 | 143 |