FFCP PHASE1:Hg19::chr14:69445930..69445948,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=87 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |||
|TSSclassifier=strong | |||
|UniProt=Q1HE25 | |||
|association_with_transcript=7bp_to_ENST00000394419_5end | |||
|cluster_id=chr14:69445930..69445948,- | |||
|coexpression_cluster_id=C2309 | |||
|description=CAGE_peak_3_at_ACTN1_5end | |||
|id=chr14:69445930..69445948,- | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-19!180;CL:0000220!3.23e-17!246;CL:0002321!8.39e-17!248;CL:0000222!1.28e-16!119;CL:0000192!4.11e-14!42;CL:0000514!4.11e-14!42;CL:0000144!7.72e-14!625;CL:0000183!1.20e-13!59;CL:0002371!2.94e-13!591;CL:0000680!3.26e-13!57;CL:0000056!3.26e-13!57;CL:0000355!3.26e-13!57;CL:0000187!6.12e-13!54;CL:0000359!2.15e-12!32;CL:0000057!7.91e-11!75;CL:0000548!5.87e-10!679;CL:0000004!5.87e-10!679;CL:0000255!5.87e-10!679;CL:0000393!7.67e-10!60;CL:0000211!7.67e-10!60;CL:0000012!1.79e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.16e-11;32!CL:0000192;1.74e-10;43!CL:0000187;9.44e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-17,250;CL:0000222,6.04e-17,121;CL:0000192,1.98e-14,43;CL:0000514,1.98e-14,43;CL:0000680,1.59e-13,58;CL:0000056,1.59e-13,58;CL:0000355,1.59e-13,58;CL:0000187,2.99e-13,55;CL:0000359,2.14e-12,32;CL:0000057,2.46e-11,76;CL:0000393,3.97e-10,61;CL:0000211,3.97e-10,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.74e-10;43!CL:0000355;1.87e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.28e-19!118;UBERON:0004535!1.68e-19!110;UBERON:0001009!5.40e-19!113;UBERON:0002049!7.28e-19!79;UBERON:0007798!7.28e-19!79;UBERON:0005256!5.42e-17!143;UBERON:0001981!7.36e-16!60;UBERON:0007500!7.36e-16!60;UBERON:0004537!7.36e-16!60;UBERON:0006965!7.36e-16!60;UBERON:0004872!2.90e-15!84;UBERON:0000055!9.37e-15!69;UBERON:0001637!1.17e-13!42;UBERON:0003509!1.17e-13!42;UBERON:0004572!1.17e-13!42;UBERON:0002100!2.23e-12!216;UBERON:0000486!5.13e-12!82;UBERON:0000914!5.37e-12!83;UBERON:0002329!5.37e-12!83;UBERON:0003077!5.37e-12!83;UBERON:0003059!5.37e-12!83;UBERON:0007282!5.37e-12!83;UBERON:0009618!5.37e-12!83;UBERON:0007285!5.37e-12!83;UBERON:0000490!8.80e-12!138;UBERON:0000468!9.34e-12!659;UBERON:0004290!2.83e-11!70;UBERON:0002385!4.45e-11!63;UBERON:0001015!4.45e-11!63;UBERON:0000383!4.45e-11!63;UBERON:0001134!6.18e-11!61;UBERON:0002036!6.18e-11!61;UBERON:0003082!6.18e-11!61;UBERON:0000467!6.37e-11!625;UBERON:0000926!7.68e-11!448;UBERON:0004120!7.68e-11!448;UBERON:0006603!7.68e-11!448;UBERON:0000480!1.32e-10!626;UBERON:0004573!1.65e-10!33;UBERON:0004571!1.65e-10!33;UBERON:0000475!1.36e-09!365;UBERON:0003104!1.72e-09!238;UBERON:0009142!1.72e-09!238;UBERON:0000119!1.05e-08!312;UBERON:0003102!1.35e-08!95;UBERON:0000483!1.74e-08!309;UBERON:0002050!6.13e-08!605;UBERON:0005423!6.13e-08!605;UBERON:0000923!7.66e-08!604;UBERON:0005291!7.66e-08!604;UBERON:0006598!7.66e-08!604;UBERON:0002532!7.66e-08!604;UBERON:0000481!8.03e-08!347;UBERON:0003081!9.26e-08!216;UBERON:0005085!2.10e-07!29;UBERON:0000922!2.58e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.26e-10;42!UBERON:0003509;6.26e-10;42!UBERON:0004572;6.26e-10;42!UBERON:0004573;1.60e-09;33!UBERON:0004571;1.60e-09;33!UBERON:0007500;2.71e-08;56!UBERON:0001981;2.71e-08;56!UBERON:0004537;2.71e-08;56!UBERON:0003914;4.72e-08;74!UBERON:0002049;3.20e-07;75!UBERON:0007798;3.20e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.63e-19,117;UBERON:0004535,5.89e-19,109;UBERON:0001009,1.85e-18,112;UBERON:0002049,2.79e-18,78;UBERON:0007798,2.79e-18,78;UBERON:0007500,2.84e-15,59;UBERON:0001981,2.84e-15,59;UBERON:0004537,2.84e-15,59;UBERON:0006965,2.84e-15,59;UBERON:0004872,1.02e-14,83;UBERON:0005256,2.79e-14,122;UBERON:0000055,3.41e-14,68;UBERON:0003104,6.55e-14,160;UBERON:0009142,6.55e-14,160;UBERON:0001637,1.16e-13,42;UBERON:0003509,1.16e-13,42;UBERON:0004572,1.16e-13,42;UBERON:0007503,2.23e-13,78;UBERON:0000490,1.14e-12,148;UBERON:0000486,2.65e-12,83;UBERON:0002100,8.21e-12,199;UBERON:0002329,1.45e-11,71;UBERON:0003059,1.45e-11,71;UBERON:0007282,1.45e-11,71;UBERON:0004290,1.45e-11,71;UBERON:0009618,1.45e-11,71;UBERON:0002385,2.26e-11,64;UBERON:0001015,2.26e-11,64;UBERON:0000383,2.26e-11,64;UBERON:0000926,2.29e-11,315;UBERON:0004120,2.29e-11,315;UBERON:0006603,2.29e-11,315;UBERON:0007524,2.73e-11,73;UBERON:0003077,3.06e-11,72;UBERON:0007285,3.06e-11,72;UBERON:0001134,3.14e-11,62;UBERON:0002036,3.14e-11,62;UBERON:0003082,3.14e-11,62;UBERON:0004573,1.64e-10,33;UBERON:0004571,1.64e-10,33;UBERON:0003102,1.75e-09,99;UBERON:0000119,5.06e-09,309;UBERON:0000483,8.46e-09,306;UBERON:0005423,6.90e-08,581;UBERON:0000922,7.40e-08,592;UBERON:0002050,1.09e-07,564;UBERON:0005085,4.62e-07,31;UBERON:0000923,4.75e-07,560;UBERON:0010316,4.75e-07,560;UBERON:0005291,4.75e-07,560;UBERON:0006598,4.75e-07,560;UBERON:0010317,4.75e-07,560;UBERON:0002532,4.75e-07,560 | |||
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| |||
|short_description=p3@ACTN1 | |||
}} |
Latest revision as of 07:30, 25 September 2015
Short description: | p3@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTN1_5end |
Coexpression cluster: | C2309_hepatic_Fibroblast_Hepatic_Smooth_Urothelial_aorta_Olfactory |
Association with transcript: | 7bp_to_ENST00000394419_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | Q1HE25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.87e-17 | 250 |
mesodermal cell | 6.04e-17 | 121 |
smooth muscle cell | 1.98e-14 | 43 |
smooth muscle myoblast | 1.98e-14 | 43 |
muscle precursor cell | 1.59e-13 | 58 |
myoblast | 1.59e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.59e-13 | 58 |
muscle cell | 2.99e-13 | 55 |
vascular associated smooth muscle cell | 2.14e-12 | 32 |
fibroblast | 2.46e-11 | 76 |
electrically responsive cell | 3.97e-10 | 61 |
electrically active cell | 3.97e-10 | 61 |