FFCP PHASE1:Hg19::chr11:114271279..114271300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10179 | |EntrezGene=10179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9904 | |HGNC=9904 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y580,F5GXV8 | |UniProt=Q9Y580,F5GXV8 | ||
|association_with_transcript=28bp_to_,-28bp_to_ENST00000375490,ENST00000541475_5end | |association_with_transcript=28bp_to_,-28bp_to_ENST00000375490,ENST00000541475_5end | ||
|cluster_id=chr11:114271279..114271300,+ | |||
|description=CAGE_peak_4_at_RBM7_5end | |description=CAGE_peak_4_at_RBM7_5end | ||
|id=chr11:114271279..114271300,+ | |id=chr11:114271279..114271300,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.02e-11!42;CL:0000860!1.66e-10!45 | |ontology_enrichment_celltype=CL:0002057!1.02e-11!42;CL:0000860!1.66e-10!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-10;33!CL:0002057;4.56e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.37e-12,42;CL:0002057,4.37e-12,42;CL:0000473,1.36e-09,48;CL:0000234,1.36e-09,48;CL:0000766,5.32e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.94e-11!659;UBERON:0000467!1.79e-09!625;UBERON:0000480!3.25e-09!626;UBERON:0000922!5.97e-08!612;UBERON:0002050!3.62e-07!605;UBERON:0005423!3.62e-07!605;UBERON:0000923!4.74e-07!604;UBERON:0005291!4.74e-07!604;UBERON:0006598!4.74e-07!604;UBERON:0002532!4.74e-07!604;UBERON:0000073!6.00e-07!94;UBERON:0001016!6.00e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.09e-07,592;UBERON:0000923,5.77e-07,560;UBERON:0010316,5.77e-07,560;UBERON:0005291,5.77e-07,560;UBERON:0006598,5.77e-07,560;UBERON:0010317,5.77e-07,560;UBERON:0002532,5.77e-07,560;UBERON:0002050,6.10e-07,564 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0.522371256399677,0.491467873003018,0,0,0,0.37129905888014,0.331397375727916,1.34465029290355,2.41077811209591,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,1.56727360739044,3.14859585844162,1.23186982565596,4.3939923858181,0.458480434487708,0.164201178899891,0.393553906568396,3.14691421479123,2.68680578668049,2.47705797305722,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.142169232487422,0.587200878669695,7.75593571944628,3.81034450193269,3.90619567288533,0,0.647787332037959,0.257575567634187,0.581592955118259,0,0.242584061187816,1.85943229524548,1.23350366406548,2.16794459626573,5.75384784644301,4.61089271752381,4.25668013799453,3.10271112662957,2.5819387343353,2.70852973188684,0.564727018627814,0.545812300115692,1.34834090667051,5.20342617030534,1.92557416245656,3.19668562899521,1.9791078011203,2.19410023383795,2.13112375266347,3.48251086354301,3.40431134814684,3.73693349397345,6.02996796616184,4.17186334736161,3.9093992046921,2.42159801053347,3.68277635987565,2.21523671208619,0.845021145247767,1.06302149982522,0.838634582033504,0.786300418025466,1.20141514273205,0.964353520182481,0.855038231223746,2.38700012638908,1.0959849225878,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0.786839080455332,0.786021525498329,0.411202997999018,0.334372990781356,0.977766799900771,1.4203434172042,0,0,0.589211814949674,0.443067789167242,0,0,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0.535081656179426,1.04535523804977,0,0.383220493601921,1.71813722741315,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.604820229674197,1.06976078313403,1.73789284659359,2.43806866313962,0,1.02290049474824,0.722878304769133,0,0.724232594804119,0,0.486634870302636,1.03988298880475,1.10864698731282,1.31752178539689,0.72038491523742,0.364295288292542,0,0,0.348259474598534,0.132957960518865,1.90792499444274,1.14398982156026,0.74291500265913,0.39752481473341,2.58070378531837,0.347140501607594,0,0.419499436209906,1.10047216776027,0.417989933073621,0.516833518338658,0.71153252537342,0,0.402829317109147,0.760272105718513,0.488124115096339,1.10298924103761,0,1.25019619597712,1.12264686313085,1.23872628531654,0,0.949265659568129,0.916008719652036,3.9534125230819,0,0.436094052142534,0.496971951695318,1.77282716330412,1.85372853138506,2.58152958673932,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0.808264032418128,0.653847612453835,0.151357427644931,0.576175924479999,1.40592859100278,1.5608003841516,0.570471821544449,0.747243402759005,2.11382097558777,1.78060238804945,1.68540968042698,0.204154171254893,0.982674538494144,0.413303124703062,2.37600571456411,1.23633464639278,0.910161361938026,0,1.34668891163253,0.875829639103749,0.831192346452549,0.877955241761676,0.30648779579902,1.35214253015937,1.58805056424029,4.84352016359927,1.49490172172997,1.27159140695737,0.900273288253207,1.75189299705346,1.8034837803194,1.48893485065272,1.18143432568886,2.14361411354637,2.01947019395292,1.28869858099219,0.969876340912871,2.84007674013291,1.71278566986988,0.847802961552438,0.773043412653187,0.818238361772504,1.43402297694502,1.34171076742555,1.32529768321485,1.2781333715647,0.829288440122964,0.756962552626885,2.18986415445498,0,1.92972281457866,0,0.928735856063958,0,1.0647612003586,0.337169380156203,2.89213235860178,0.441175890929576,1.52515610864684,0.949082476444386,0.404493924480493,1.37355025587742,0.38474715694639,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,2.36315962672562,0.441463099414651,0.614942192715568,2.57351715447788,0.548751427043128,0,2.21163739305588,1.20364978706088,0.325808305310325,1.03993478527958,0,0.695582429850461,2.34817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0.297262324577456,0,1.00789276919316,0.567100388969546,1.61205340865127,0.581267877027924,0.383382679165211,0,0.176096868026452,0.829312462163088,0.864719720501769,0.25248486685276,0.507983154337352,0,0,0,0.514137463516618,0.300343057843917,0.571652865261156,0.672786506072164,1.30788020649984,0.5867062865676,1.03417372606222,0,2.535908257668,1.59562869950922,1.04007436911366,1.02882949704857,0,0.532844358032199,0.857867961948885,0,0,0.977208552881205,2.13235169245527,0,1.20575750823834,0.871533458600294,1.49959486773086,1.2162378064119,0,0,0.958499421966331,2.29723871668228,0,0.868687840005475,0.821905290201534,1.07436577943937,0.112085143993527,1.97030760201927,0.431255149719035,0.77005821767849,1.27047312111232,1.30139853857622,3.86644406388848,2.17771144934653,2.55175500661265,2.24702107184155,0,3.72973962092432,0.49076596687656,0,0.271265023699736,0.623912584592421,1.07057393278297,0.473107245101804,0.702848489956279,0.300946099727719,0,1.03473071292505,1.99267679560631,2.02806085395873,1.39013783148933,0,0.343143423810856,0.413536052245775,2.80428461064202,1.06727557803444,0.303127571446259,0,0.907170879989041,0.24810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| ||
|short_description=p4@RBM7 | |short_description=p4@RBM7 | ||
}} | }} |
Latest revision as of 07:24, 25 September 2015
Short description: | p4@RBM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBM7_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_, -28bp_to_ENST00000375490, ENST00000541475_5end |
EntrezGene: | RBM7 |
HGNC: | 9904 |
UniProt: | Q9Y580F5GXV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.37e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.37e-12 | 42 |
defensive cell | 1.36e-09 | 48 |
phagocyte | 1.36e-09 | 48 |
myeloid leukocyte | 5.32e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
embryo | 4.09e-07 | 592 |
germ layer | 5.77e-07 | 560 |
germ layer / neural crest | 5.77e-07 | 560 |
embryonic tissue | 5.77e-07 | 560 |
presumptive structure | 5.77e-07 | 560 |
germ layer / neural crest derived structure | 5.77e-07 | 560 |
epiblast (generic) | 5.77e-07 | 560 |
embryonic structure | 6.10e-07 | 564 |