FFCP PHASE1:Hg19::chr14:69349631..69349650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=87 | |EntrezGene=87 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |HGNC=163 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-347bp_to_ENST00000555075_5end | |association_with_transcript=-347bp_to_ENST00000555075_5end | ||
|cluster_id=chr14:69349631..69349650,- | |||
|description=CAGE_peak_8_at_ACTN1_5end | |description=CAGE_peak_8_at_ACTN1_5end | ||
|id=chr14:69349631..69349650,- | |id=chr14:69349631..69349650,- | ||
|ontology_enrichment_celltype=CL:0002321!3.87e-13!248;CL:0000220!5.50e-13!246;CL:0000055!5.44e-12!180;CL:0000548!2.21e-10!679;CL:0000004!2.21e-10!679;CL:0000255!2.21e-10!679;CL:0000144!3.09e-10!625;CL:0002371!6.12e-10!591;CL:0000012!1.06e-09!682;CL:0000057!1.41e-08!75;CL:0000066!3.49e-08!254;CL:0000222!4.13e-07!119 | |ontology_enrichment_celltype=CL:0002321!3.87e-13!248;CL:0000220!5.50e-13!246;CL:0000055!5.44e-12!180;CL:0000548!2.21e-10!679;CL:0000004!2.21e-10!679;CL:0000255!2.21e-10!679;CL:0000144!3.09e-10!625;CL:0002371!6.12e-10!591;CL:0000012!1.06e-09!682;CL:0000057!1.41e-08!75;CL:0000066!3.49e-08!254;CL:0000222!4.13e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,3.28e-07,34;CL:0000057,8.80e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.75e-09!659;UBERON:0000467!1.08e-08!625;UBERON:0000480!1.72e-08!626;UBERON:0005256!2.07e-08!143;UBERON:0003914!2.63e-08!118;UBERON:0002049!2.26e-07!79;UBERON:0007798!2.26e-07!79;UBERON:0003102!2.90e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.67e-08,42;UBERON:0003509,1.67e-08,42;UBERON:0004572,1.67e-08,42;UBERON:0002049,2.29e-07,78;UBERON:0007798,2.29e-07,78;UBERON:0000055,7.18e-07,68;UBERON:0007500,8.67e-07,59;UBERON:0001981,8.67e-07,59;UBERON:0004537,8.67e-07,59;UBERON:0006965,8.67e-07,59;UBERON:0003102,9.23e-07,99 | |||
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| ||
|short_description=p8@ACTN1 | |short_description=p8@ACTN1 | ||
}} | }} |
Latest revision as of 07:23, 25 September 2015
Short description: | p8@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ACTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -347bp_to_ENST00000555075_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 3.28e-07 | 34 |
fibroblast | 8.80e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
artery | 1.67e-08 | 42 |
arterial blood vessel | 1.67e-08 | 42 |
arterial system | 1.67e-08 | 42 |
vasculature | 2.29e-07 | 78 |
vascular system | 2.29e-07 | 78 |
vessel | 7.18e-07 | 68 |
epithelial tube open at both ends | 8.67e-07 | 59 |
blood vessel | 8.67e-07 | 59 |
blood vasculature | 8.67e-07 | 59 |
vascular cord | 8.67e-07 | 59 |
surface structure | 9.23e-07 | 99 |