FFCP PHASE1:Hg19::chr2:231825896..231825916,-: Difference between revisions
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|id=chr2:231825896..231825916,-
|short_description=p5@GPR55
|description=CAGE_peak_5_at_GPR55_5end
|association_with_transcript=-115bp_to_ENST00000392039_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9290 | |EntrezGene=9290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4511 | |HGNC=4511 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2T6 | |UniProt=Q9Y2T6 | ||
|association_with_transcript=-115bp_to_ENST00000392039_5end | |||
|cluster_id=chr2:231825896..231825916,- | |||
|coexpression_cluster_id=C479 | |||
|description=CAGE_peak_5_at_GPR55_5end | |||
|id=chr2:231825896..231825916,- | |||
|ontology_enrichment_celltype=CL:0002603!1.32e-33!3;CL:0000243!3.50e-16!15;CL:0000125!3.50e-16!15;CL:0000030!3.50e-16!15;CL:0000339!3.50e-16!15;CL:0000128!8.50e-15!7;CL:0000126!8.50e-15!7;CL:0000127!8.50e-15!7;CL:0002453!8.50e-15!7;CL:0000095!1.78e-14!17;CL:0000123!1.78e-14!17;CL:0002319!3.64e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.86e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.59e-23,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.16e-25;11!UBERON:0009497;2.28e-21;13!UBERON:0001041;6.09e-10;30!UBERON:0003104;2.74e-09;31 | |||
|ontology_enrichment_disease=DOID:5662!7.03e-13!1;DOID:1909!6.80e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.23e-66;1!DOID:7;9.75e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.23e-66,1;DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002037!3.70e-17!6;UBERON:0006215!3.70e-17!6;UBERON:0006834!4.31e-12!1;UBERON:0002680!1.22e-11!9;UBERON:0001895!1.22e-11!9;UBERON:0010092!1.22e-11!9;UBERON:0004733!7.26e-09!12;UBERON:0002028!7.26e-09!12;UBERON:0007277!7.26e-09!12;UBERON:0004732!3.19e-08!13;UBERON:0003076!3.43e-07!15;UBERON:0003057!3.43e-07!15;UBERON:0003127!8.52e-07!2;UBERON:0001875!9.02e-07!2;UBERON:0006514!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.09e-15;19!UBERON:0006925;5.09e-15;19!UBERON:0002423;1.06e-11;25!UBERON:0002365;6.09e-10;31!UBERON:0002330;6.09e-10;31!UBERON:0002368;2.73e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.91e-15,19;UBERON:0006925,4.91e-15,19;UBERON:0008836,4.91e-15,19;UBERON:0008835,3.77e-13,22;UBERON:0003894,3.77e-13,22;UBERON:0009854,1.25e-12,23;UBERON:0007499,1.03e-11,25;UBERON:0009497,1.03e-11,25;UBERON:0000015,1.03e-11,25;UBERON:0002423,1.03e-11,25;UBERON:0006235,1.03e-11,25;UBERON:0004161,1.03e-11,25;UBERON:0009856,2.63e-11,26;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p5@GPR55 | |||
}} | }} |
Latest revision as of 07:03, 25 September 2015
Short description: | p5@GPR55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR55_5end |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | -115bp_to_ENST00000392039_5end |
EntrezGene: | GPR55 |
HGNC: | 4511 |
UniProt: | Q9Y2T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.59e-23 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.91e-15 | 19 |
digestive gland | 4.91e-15 | 19 |
liver bud | 4.91e-15 | 19 |
hepatic diverticulum | 3.77e-13 | 22 |
liver primordium | 3.77e-13 | 22 |
digestive tract diverticulum | 1.25e-12 | 23 |
epithelial sac | 1.03e-11 | 25 |
epithelium of foregut-midgut junction | 1.03e-11 | 25 |
anatomical boundary | 1.03e-11 | 25 |
hepatobiliary system | 1.03e-11 | 25 |
foregut-midgut junction | 1.03e-11 | 25 |
septum transversum | 1.03e-11 | 25 |
sac | 2.63e-11 | 26 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.23e-66 | 1 |
disease of anatomical entity | 6.60e-08 | 39 |