FFCP PHASE1:Hg19::chr3:146262293..146262304,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:146262293..146262304,- to FFCP PHASE1:Hg19::chr3:146262293..146262304,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5359 | |EntrezGene=5359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9092 | |HGNC=9092 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSI9,F2Z3F2 | |UniProt=C9JSI9,F2Z3F2 | ||
|association_with_transcript=3bp_to_ENST00000448205,ENST00000493432_5end | |||
|cluster_id=chr3:146262293..146262304,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_PLSCR1_5end | |||
|id=chr3:146262293..146262304,- | |||
|ontology_enrichment_celltype=CL:0002057!1.68e-28!42;CL:0000766!1.99e-27!76;CL:0000860!2.99e-26!45;CL:0002194!3.50e-25!63;CL:0000576!3.50e-25!63;CL:0000040!3.50e-25!63;CL:0000559!3.50e-25!63;CL:0002009!1.69e-24!65;CL:0000557!5.31e-23!71;CL:0000763!6.30e-23!112;CL:0000049!6.30e-23!112;CL:0000839!2.79e-22!70;CL:0000037!1.21e-14!172;CL:0000566!1.21e-14!172;CL:0002032!4.68e-14!165;CL:0000837!4.68e-14!165;CL:0000738!6.39e-14!140;CL:0002087!5.08e-13!119;CL:0000988!6.40e-13!182;CL:0002031!2.27e-11!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.93e-36;33!CL:0002057;1.93e-36;33!CL:0000473;1.46e-33;39!CL:0000234;1.46e-33;39!CL:0000576;6.42e-32;48!CL:0000766;1.22e-23;69!CL:0000763;7.22e-14;100!CL:0000094;4.38e-08;8!CL:0002087;1.33e-07;104!CL:0002393;4.79e-07;6!CL:0002397;4.79e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.70e-51,48;CL:0000234,4.70e-51,48;CL:0000766,1.93e-49,72;CL:0000860,6.31e-48,42;CL:0002057,6.31e-48,42;CL:0002194,6.15e-46,59;CL:0000576,6.15e-46,59;CL:0000040,6.15e-46,59;CL:0000559,6.15e-46,59;CL:0002009,2.85e-45,61;CL:0000557,3.75e-42,67;CL:0000839,2.94e-40,66;CL:0000763,7.89e-37,108;CL:0000049,7.89e-37,108;CL:0000738,6.67e-24,136;CL:0000037,1.28e-21,168;CL:0002087,4.93e-21,115;CL:0002032,1.60e-20,161;CL:0000837,1.60e-20,161;CL:0000988,3.08e-19,177;CL:0002031,3.57e-18,120;CL:0002393,2.73e-09,9;CL:0002397,2.73e-09,9;CL:0000094,2.25e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-34;42!CL:0000049;3.85e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.70e-27!115;UBERON:0002193!3.45e-25!112;UBERON:0002390!3.64e-25!102;UBERON:0003061!3.64e-25!102;UBERON:0002371!4.77e-19!80;UBERON:0002405!1.00e-17!115;UBERON:0001474!1.28e-16!86;UBERON:0004765!1.03e-12!101;UBERON:0001434!1.03e-12!101;UBERON:0001049!2.96e-08!57;UBERON:0005068!2.96e-08!57;UBERON:0006241!2.96e-08!57;UBERON:0007135!2.96e-08!57;UBERON:0003081!3.94e-07!216;UBERON:0002616!6.40e-07!59;UBERON:0003080!8.84e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.96e-08;15!UBERON:0000179;1.96e-08;15!UBERON:0000463;1.96e-08;15!UBERON:0000125;2.50e-07;9!UBERON:0002308;2.50e-07;9!UBERON:0002420;3.60e-07;9!UBERON:0007245;3.60e-07;9!UBERON:0010009;3.60e-07;9!UBERON:0010011;3.60e-07;9!UBERON:0000454;3.60e-07;9!UBERON:0007023;6.43e-07;114!UBERON:0003528;8.07e-07;34!UBERON:0002020;8.07e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.38e-42,108;UBERON:0002390,2.95e-42,98;UBERON:0003061,2.95e-42,98;UBERON:0002371,1.07e-34,76;UBERON:0002405,1.77e-34,93;UBERON:0001474,1.15e-30,82;UBERON:0007023,2.59e-28,114;UBERON:0004765,3.65e-26,90;UBERON:0001434,1.31e-21,100;UBERON:0003081,7.93e-16,203;UBERON:0001049,4.26e-10,56;UBERON:0005068,4.26e-10,56;UBERON:0006241,4.26e-10,56;UBERON:0007135,4.26e-10,56;UBERON:0000073,3.28e-09,53;UBERON:0002616,3.28e-09,53;UBERON:0000178,1.92e-08,15;UBERON:0000179,1.92e-08,15;UBERON:0000463,1.92e-08,15;UBERON:0002204,2.27e-08,167;UBERON:0003528,3.53e-08,34;UBERON:0002020,3.53e-08,34;UBERON:0000125,2.16e-07,9;UBERON:0002308,2.16e-07,9;UBERON:0002420,3.18e-07,9;UBERON:0007245,3.18e-07,9;UBERON:0010009,3.18e-07,9;UBERON:0010011,3.18e-07,9;UBERON:0000454,3.18e-07,9;UBERON:0002780,3.54e-07,41;UBERON:0001890,3.54e-07,41;UBERON:0003080,3.54e-07,41;UBERON:0006240,3.54e-07,41;UBERON:0002791,6.40e-07,32;UBERON:0002050,8.21e-07,564;UBERON:0000923,8.90e-07,560;UBERON:0010316,8.90e-07,560;UBERON:0005291,8.90e-07,560;UBERON:0006598,8.90e-07,560;UBERON:0010317,8.90e-07,560;UBERON:0002532,8.90e-07,560 | |||
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| ||
|short_description=p6@PLSCR1 | |||
}} | }} |
Latest revision as of 07:01, 25 September 2015
Short description: | p6@PLSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLSCR1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 3bp_to_ENST00000448205, ENST00000493432_5end |
EntrezGene: | PLSCR1 |
HGNC: | 9092 |
UniProt: | C9JSI9F2Z3F2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.70e-51 | 48 |
phagocyte | 4.70e-51 | 48 |
myeloid leukocyte | 1.93e-49 | 72 |
classical monocyte | 6.31e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.31e-48 | 42 |
monopoietic cell | 6.15e-46 | 59 |
monocyte | 6.15e-46 | 59 |
monoblast | 6.15e-46 | 59 |
promonocyte | 6.15e-46 | 59 |
macrophage dendritic cell progenitor | 2.85e-45 | 61 |
granulocyte monocyte progenitor cell | 3.75e-42 | 67 |
myeloid lineage restricted progenitor cell | 2.94e-40 | 66 |
myeloid cell | 7.89e-37 | 108 |
common myeloid progenitor | 7.89e-37 | 108 |
leukocyte | 6.67e-24 | 136 |
hematopoietic stem cell | 1.28e-21 | 168 |
nongranular leukocyte | 4.93e-21 | 115 |
hematopoietic oligopotent progenitor cell | 1.60e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-20 | 161 |
hematopoietic cell | 3.08e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 3.57e-18 | 120 |
intermediate monocyte | 2.73e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.73e-09 | 9 |
granulocyte | 2.25e-08 | 8 |