FFCP PHASE1:Hg19::chr5:142023741..142023750,-: Difference between revisions
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|id=chr5:142023741..142023750,-
|short_description=p18@FGF1
|description=CAGE_peak_18_at_FGF1_5end
|association_with_transcript=15bp_to_ENST00000394496_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2246 | |EntrezGene=2246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3665 | |HGNC=3665 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDC5 | |UniProt=C9JDC5 | ||
|association_with_transcript=15bp_to_ENST00000394496_5end | |||
|cluster_id=chr5:142023741..142023750,- | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_18_at_FGF1_5end | |||
|id=chr5:142023741..142023750,- | |||
|ontology_enrichment_celltype=CL:0002579!2.91e-11!3;CL:0000055!3.06e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.71e-14;3!CL:0002590;1.71e-14;3!CL:0002594;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.40e-14,3;CL:0002579,2.09e-14,3;CL:0002594,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;6.62e-41;1!DOID:3350;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.62e-41,1;DOID:3350,3.11e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0001310;3.26e-11;4!UBERON:0005284;3.10e-09;5!UBERON:0003688;6.55e-08;6!UBERON:0002358;6.55e-08;6!UBERON:0003684;6.55e-08;6!UBERON:0001178;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0001781,3.10e-11,4;UBERON:0001310,3.42e-11,4;UBERON:0005284,2.74e-09,5;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6 | |||
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| ||
|short_description=p18@FGF1 | |||
}} | }} |
Latest revision as of 06:51, 25 September 2015
Short description: | p18@FGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FGF1_5end |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | 15bp_to_ENST00000394496_5end |
EntrezGene: | FGF1 |
HGNC: | 3665 |
UniProt: | C9JDC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.40e-14 | 3 |
omentum preadipocyte | 2.09e-14 | 3 |
smooth muscle cell of the umbilical artery | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.48e-40 | 1 |
cranial nerve | 1.48e-40 | 1 |
nerve trunk | 1.48e-40 | 1 |
nerve connecting eye with brain | 1.48e-40 | 1 |
nerve | 1.48e-40 | 1 |
retinal neural layer | 1.48e-40 | 1 |
presumptive neural retina | 1.48e-40 | 1 |
neural tissue | 4.66e-21 | 2 |
multi cell component structure | 4.66e-21 | 2 |
neuron projection bundle | 4.66e-21 | 2 |
layer of retina | 3.10e-11 | 4 |
umbilical artery | 3.42e-11 | 4 |
brain vasculature | 2.74e-09 | 5 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.62e-41 | 1 |
mesenchymal cell neoplasm | 3.11e-21 | 2 |