FFCP PHASE1:Hg19::chr7:115850556..115850626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26136 | |EntrezGene=26136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14620 | |HGNC=14620 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7T0,F8WDI4,B7Z6L5 | |UniProt=F8W7T0,F8WDI4,B7Z6L5 | ||
|association_with_transcript=0bp_to_ENST00000455989,ENST00000461440,ENST00000492891,ENST00000496871,ENST00000537767,uc003vho.2,uc011kmx.1,uc011kmy.1_5end | |association_with_transcript=0bp_to_ENST00000455989,ENST00000461440,ENST00000492891,ENST00000496871,ENST00000537767,uc003vho.2,uc011kmx.1,uc011kmy.1_5end | ||
|cluster_id=chr7:115850556..115850626,+ | |||
|coexpression_cluster_id=C1983 | |||
|description=CAGE_peak_1_at_TES_5end | |description=CAGE_peak_1_at_TES_5end | ||
|id=chr7:115850556..115850626,+ | |id=chr7:115850556..115850626,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.22e-23!42;CL:0000860!6.80e-22!45;CL:0002087!4.50e-12!119;CL:0000738!8.05e-12!140;CL:0002009!4.81e-11!65;CL:0002194!2.91e-10!63;CL:0000576!2.91e-10!63;CL:0000040!2.91e-10!63;CL:0000559!2.91e-10!63;CL:0002031!3.22e-09!124;CL:0000066!4.52e-09!254;CL:0000766!4.85e-09!76;CL:0000557!1.19e-08!71;CL:0002076!6.05e-08!43;CL:0000839!7.46e-07!70;CL:0000063!7.72e-07!578 | |ontology_enrichment_celltype=CL:0002057!5.22e-23!42;CL:0000860!6.80e-22!45;CL:0002087!4.50e-12!119;CL:0000738!8.05e-12!140;CL:0002009!4.81e-11!65;CL:0002194!2.91e-10!63;CL:0000576!2.91e-10!63;CL:0000040!2.91e-10!63;CL:0000559!2.91e-10!63;CL:0002031!3.22e-09!124;CL:0000066!4.52e-09!254;CL:0000766!4.85e-09!76;CL:0000557!1.19e-08!71;CL:0002076!6.05e-08!43;CL:0000839!7.46e-07!70;CL:0000063!7.72e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-18;33!CL:0002057;3.24e-18;33!CL:0000576;4.46e-11;48!CL:0000473;5.04e-11;39!CL:0000234;5.04e-11;39!CL:0002076;4.44e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.19e-23,42;CL:0002057,5.19e-23,42;CL:0000473,1.45e-17,48;CL:0000234,1.45e-17,48;CL:0002087,2.71e-12,115;CL:0000738,5.50e-12,136;CL:0002009,1.90e-11,61;CL:0002194,1.21e-10,59;CL:0000576,1.21e-10,59;CL:0000040,1.21e-10,59;CL:0000559,1.21e-10,59;CL:0002031,2.33e-09,120;CL:0000766,2.78e-09,72;CL:0000066,3.02e-09,253;CL:0000557,6.69e-09,67;CL:0002076,1.98e-08,42;CL:0000839,4.96e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.14e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.43e-08!102;UBERON:0003061!4.43e-08!102;UBERON:0000926!7.97e-08!448;UBERON:0004120!7.97e-08!448;UBERON:0006603!7.97e-08!448;UBERON:0004119!1.22e-07!169;UBERON:0000925!1.22e-07!169;UBERON:0006595!1.22e-07!169;UBERON:0002193!5.42e-07!112;UBERON:0002371!6.39e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.31e-08,98;UBERON:0003061,3.31e-08,98;UBERON:0004119,3.70e-07,160;UBERON:0000925,3.70e-07,160;UBERON:0006595,3.70e-07,160;UBERON:0002193,4.50e-07,108;UBERON:0002371,4.56e-07,76 | |||
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| ||
|short_description=p1@TES | |short_description=p1@TES | ||
}} | }} |
Latest revision as of 06:45, 25 September 2015
Short description: | p1@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TES_5end |
Coexpression cluster: | C1983_gastric_CD14_squamous_amniotic_myeloma_Placental_Wilms |
Association with transcript: | 0bp_to_ENST00000455989, ENST00000461440, ENST00000492891, ENST00000496871, ENST00000537767, uc003vho.2, uc011kmx.1, uc011kmy.1_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | F8W7T0F8WDI4B7Z6L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.19e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.19e-23 | 42 |
defensive cell | 1.45e-17 | 48 |
phagocyte | 1.45e-17 | 48 |
nongranular leukocyte | 2.71e-12 | 115 |
leukocyte | 5.50e-12 | 136 |
macrophage dendritic cell progenitor | 1.90e-11 | 61 |
monopoietic cell | 1.21e-10 | 59 |
monocyte | 1.21e-10 | 59 |
monoblast | 1.21e-10 | 59 |
promonocyte | 1.21e-10 | 59 |
hematopoietic lineage restricted progenitor cell | 2.33e-09 | 120 |
myeloid leukocyte | 2.78e-09 | 72 |
epithelial cell | 3.02e-09 | 253 |
granulocyte monocyte progenitor cell | 6.69e-09 | 67 |
endo-epithelial cell | 1.98e-08 | 42 |
myeloid lineage restricted progenitor cell | 4.96e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.31e-08 | 98 |
blood island | 3.31e-08 | 98 |
endoderm-derived structure | 3.70e-07 | 160 |
endoderm | 3.70e-07 | 160 |
presumptive endoderm | 3.70e-07 | 160 |
hemolymphoid system | 4.50e-07 | 108 |
bone marrow | 4.56e-07 | 76 |