FFCP PHASE1:Hg19::chr17:46622205..46622218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3212 | |EntrezGene=3212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5113 | |HGNC=5113 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENST00000326226_5end | |association_with_transcript=-189bp_to_ENST00000326226_5end | ||
|cluster_id=chr17:46622205..46622218,- | |||
|coexpression_cluster_id=C249 | |coexpression_cluster_id=C249 | ||
|description=CAGE_peak_3_at_HOXB2_5end | |description=CAGE_peak_3_at_HOXB2_5end | ||
|id=chr17:46622205..46622218,- | |id=chr17:46622205..46622218,- | ||
|ontology_enrichment_celltype=CL:0000222!1.18e-10!119;CL:1000497!1.97e-09!18;CL:0002518!1.97e-09!18;CL:1000449!7.32e-09!16;CL:0000055!8.08e-09!180;CL:0000183!6.59e-08!59;CL:1000507!2.25e-07!12;CL:1000494!2.25e-07!12;CL:0000680!2.28e-07!57;CL:0000056!2.28e-07!57;CL:0000355!2.28e-07!57;CL:0002681!7.43e-07!13;CL:0002584!7.43e-07!13 | |ontology_enrichment_celltype=CL:0000222!1.18e-10!119;CL:1000497!1.97e-09!18;CL:0002518!1.97e-09!18;CL:1000449!7.32e-09!16;CL:0000055!8.08e-09!180;CL:0000183!6.59e-08!59;CL:1000507!2.25e-07!12;CL:1000494!2.25e-07!12;CL:0000680!2.28e-07!57;CL:0000056!2.28e-07!57;CL:0000355!2.28e-07!57;CL:0002681!7.43e-07!13;CL:0002584!7.43e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.39e-14;17!CL:0002518;3.39e-14;17!CL:1000449;1.56e-13;15!CL:1000507;3.41e-11;10!CL:1000494;3.41e-11;10!CL:0002681;1.34e-10;12!CL:0002584;1.34e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.78e-14,17;CL:0002518,2.78e-14,17;CL:1000449,1.55e-13,15;CL:1000507,3.47e-11,10;CL:1000494,3.47e-11,10;CL:0000222,1.01e-10,121;CL:0002681,1.31e-10,12;CL:0002584,1.31e-10,12;CL:0002321,7.60e-08,250;CL:0000680,9.48e-08,58;CL:0000056,9.48e-08,58;CL:0000355,9.48e-08,58;CL:0000187,8.96e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.04e-07,239;DOID:162,7.44e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.37e-11!27;UBERON:0003918!1.37e-11!27;UBERON:0005095!1.37e-11!27;UBERON:0007687!1.37e-11!27;UBERON:0000489!4.09e-11!32;UBERON:0003914!2.03e-10!118;UBERON:0000080!2.29e-09!18;UBERON:0002120!2.29e-09!18;UBERON:0004875!2.29e-09!18;UBERON:0005721!2.29e-09!18;UBERON:0005754!2.29e-09!18;UBERON:0007297!2.29e-09!18;UBERON:0006555!3.14e-09!17;UBERON:0005103!3.14e-09!17;UBERON:0000083!3.14e-09!17;UBERON:0009201!3.14e-09!17;UBERON:0004819!3.14e-09!17;UBERON:0006553!3.14e-09!17;UBERON:0003074!3.14e-09!17;UBERON:0003060!3.14e-09!17;UBERON:0004211!7.32e-09!16;UBERON:0001285!7.32e-09!16;UBERON:0007684!7.32e-09!16;UBERON:0003220!7.32e-09!16;UBERON:0004208!7.32e-09!16;UBERON:0000058!1.92e-08!26;UBERON:0005256!2.17e-08!143;UBERON:0000353!3.24e-08!17;UBERON:0004290!3.52e-08!70;UBERON:0003887!3.96e-08!21;UBERON:0004876!1.45e-07!20;UBERON:0005172!1.76e-07!55;UBERON:0005173!1.76e-07!55;UBERON:0009773!2.25e-07!12;UBERON:0001231!2.25e-07!12;UBERON:0004810!2.25e-07!12;UBERON:0001225!7.43e-07!13;UBERON:0008987!7.43e-07!13;UBERON:0001637!9.69e-07!42;UBERON:0003509!9.69e-07!42;UBERON:0004572!9.69e-07!42 | |ontology_enrichment_uberon=UBERON:0002113!1.37e-11!27;UBERON:0003918!1.37e-11!27;UBERON:0005095!1.37e-11!27;UBERON:0007687!1.37e-11!27;UBERON:0000489!4.09e-11!32;UBERON:0003914!2.03e-10!118;UBERON:0000080!2.29e-09!18;UBERON:0002120!2.29e-09!18;UBERON:0004875!2.29e-09!18;UBERON:0005721!2.29e-09!18;UBERON:0005754!2.29e-09!18;UBERON:0007297!2.29e-09!18;UBERON:0006555!3.14e-09!17;UBERON:0005103!3.14e-09!17;UBERON:0000083!3.14e-09!17;UBERON:0009201!3.14e-09!17;UBERON:0004819!3.14e-09!17;UBERON:0006553!3.14e-09!17;UBERON:0003074!3.14e-09!17;UBERON:0003060!3.14e-09!17;UBERON:0004211!7.32e-09!16;UBERON:0001285!7.32e-09!16;UBERON:0007684!7.32e-09!16;UBERON:0003220!7.32e-09!16;UBERON:0004208!7.32e-09!16;UBERON:0000058!1.92e-08!26;UBERON:0005256!2.17e-08!143;UBERON:0000353!3.24e-08!17;UBERON:0004290!3.52e-08!70;UBERON:0003887!3.96e-08!21;UBERON:0004876!1.45e-07!20;UBERON:0005172!1.76e-07!55;UBERON:0005173!1.76e-07!55;UBERON:0009773!2.25e-07!12;UBERON:0001231!2.25e-07!12;UBERON:0004810!2.25e-07!12;UBERON:0001225!7.43e-07!13;UBERON:0008987!7.43e-07!13;UBERON:0001637!9.69e-07!42;UBERON:0003509!9.69e-07!42;UBERON:0004572!9.69e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.48e-15;24!UBERON:0011143;1.48e-15;24!UBERON:0006555;1.56e-13;15!UBERON:0004819;1.56e-13;15!UBERON:0001285;1.56e-13;15!UBERON:0007684;1.56e-13;15!UBERON:0000489;1.75e-12;29!UBERON:0000353;1.81e-12;15!UBERON:0004211;3.41e-11;10!UBERON:0009773;3.41e-11;10!UBERON:0001231;3.41e-11;10!UBERON:0004810;3.41e-11;10!UBERON:0006554;7.70e-11;30!UBERON:0001008;7.70e-11;30!UBERON:0001225;1.34e-10;12!UBERON:0008987;1.34e-10;12!UBERON:0001851;3.27e-10;15!UBERON:0005172;2.34e-07;52!UBERON:0005173;2.34e-07;52 | |||
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| ||
|short_description=p3@HOXB2 | |short_description=p3@HOXB2 | ||
}} | }} |
Latest revision as of 06:44, 25 September 2015
Short description: | p3@HOXB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB2_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | -189bp_to_ENST00000326226_5end |
EntrezGene: | HOXB2 |
HGNC: | 5113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.78e-14 | 17 |
kidney epithelial cell | 2.78e-14 | 17 |
epithelial cell of nephron | 1.55e-13 | 15 |
kidney tubule cell | 3.47e-11 | 10 |
nephron tubule epithelial cell | 3.47e-11 | 10 |
mesodermal cell | 1.01e-10 | 121 |
kidney cortical cell | 1.31e-10 | 12 |
renal cortical epithelial cell | 1.31e-10 | 12 |
embryonic cell | 7.60e-08 | 250 |
muscle precursor cell | 9.48e-08 | 58 |
myoblast | 9.48e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.48e-08 | 58 |
muscle cell | 8.96e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.04e-07 | 239 |
cancer | 7.44e-07 | 235 |