FFCP PHASE1:Hg19::chr9:130743289..130743339,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130743289..130743339,- to FFCP PHASE1:Hg19::chr9:130743289..130743339,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399665 | |EntrezGene=399665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31419 | |HGNC=31419 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T9C2 | |UniProt=Q5T9C2 | ||
|association_with_transcript=-477bp_to_ENST00000464641,NM_001035254_5end | |||
|cluster_id=chr9:130743289..130743339,- | |||
|description=CAGE_peak_3_at_FAM102A_5end | |||
|id=chr9:130743289..130743339,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-18!115;UBERON:0001049!1.08e-17!57;UBERON:0005068!1.08e-17!57;UBERON:0006241!1.08e-17!57;UBERON:0007135!1.08e-17!57;UBERON:0005743!3.57e-16!86;UBERON:0001017!3.91e-16!82;UBERON:0003075!4.59e-15!86;UBERON:0007284!4.59e-15!86;UBERON:0002780!5.06e-15!41;UBERON:0001890!5.06e-15!41;UBERON:0006240!5.06e-15!41;UBERON:0003080!5.71e-15!42;UBERON:0002616!5.82e-15!59;UBERON:0000955!1.54e-14!69;UBERON:0006238!1.54e-14!69;UBERON:0001869!3.28e-13!32;UBERON:0002346!6.61e-13!90;UBERON:0000073!1.10e-12!94;UBERON:0001016!1.10e-12!94;UBERON:0002020!1.36e-12!34;UBERON:0003528!1.36e-12!34;UBERON:0001893!1.37e-12!34;UBERON:0003056!1.73e-12!61;UBERON:0000033!3.36e-12!123;UBERON:0000153!3.78e-12!129;UBERON:0007811!3.78e-12!129;UBERON:0004121!4.69e-12!169;UBERON:0002791!5.52e-12!33;UBERON:0000924!9.30e-11!173;UBERON:0006601!9.30e-11!173;UBERON:0000475!6.04e-10!365;UBERON:0000956!6.45e-10!25;UBERON:0000203!6.45e-10!25;UBERON:0002619!7.02e-10!22;UBERON:0001950!7.07e-09!20;UBERON:0004111!1.01e-08!241;UBERON:0000064!1.31e-08!219;UBERON:0000477!2.91e-07!286;UBERON:0000025!9.78e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.95e-12;32!UBERON:0001893;1.31e-11;34!UBERON:0003528;2.44e-11;34!UBERON:0002020;2.44e-11;34!UBERON:0002791;2.65e-11;32!UBERON:0002780;4.55e-11;41!UBERON:0001890;4.55e-11;41!UBERON:0000956;5.80e-10;25!UBERON:0000203;5.80e-10;25!UBERON:0002619;7.55e-10;22!UBERON:0000073;1.78e-09;53!UBERON:0002616;1.78e-09;53!UBERON:0001950;7.74e-09;20!UBERON:0000955;4.32e-07;68!UBERON:0001017;4.55e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.48e-18,114;UBERON:0001049,1.01e-17,56;UBERON:0005068,1.01e-17,56;UBERON:0006241,1.01e-17,56;UBERON:0007135,1.01e-17,56;UBERON:0000073,4.54e-17,53;UBERON:0002616,4.54e-17,53;UBERON:0001017,4.17e-16,81;UBERON:0002780,5.03e-15,41;UBERON:0001890,5.03e-15,41;UBERON:0003080,5.03e-15,41;UBERON:0006240,5.03e-15,41;UBERON:0000955,1.62e-14,68;UBERON:0006238,1.62e-14,68;UBERON:0001869,3.26e-13,32;UBERON:0003075,7.40e-13,82;UBERON:0007284,7.40e-13,82;UBERON:0003528,1.35e-12,34;UBERON:0002020,1.35e-12,34;UBERON:0001893,1.36e-12,34;UBERON:0001016,1.55e-12,89;UBERON:0002791,5.54e-12,32;UBERON:0003056,1.16e-11,61;UBERON:0010371,1.75e-11,104;UBERON:0002346,7.97e-11,86;UBERON:0004121,2.58e-10,171;UBERON:0000924,2.58e-10,171;UBERON:0006601,2.58e-10,171;UBERON:0000956,6.43e-10,25;UBERON:0000203,6.43e-10,25;UBERON:0002619,6.99e-10,22;UBERON:0001950,7.05e-09,20;UBERON:0010314,1.03e-08,132;UBERON:0004111,2.18e-08,240 | |||
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| ||
|short_description=p3@FAM102A | |||
}} | }} |
Latest revision as of 06:43, 25 September 2015
Short description: | p3@FAM102A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM102A_5end |
Coexpression cluster: | NA |
Association with transcript: | -477bp_to_ENST00000464641, NM_001035254_5end |
EntrezGene: | FAM102A |
HGNC: | 31419 |
UniProt: | Q5T9C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.48e-18 | 114 |
neural tube | 1.01e-17 | 56 |
neural rod | 1.01e-17 | 56 |
future spinal cord | 1.01e-17 | 56 |
neural keel | 1.01e-17 | 56 |
regional part of nervous system | 4.54e-17 | 53 |
regional part of brain | 4.54e-17 | 53 |
central nervous system | 4.17e-16 | 81 |
regional part of forebrain | 5.03e-15 | 41 |
forebrain | 5.03e-15 | 41 |
anterior neural tube | 5.03e-15 | 41 |
future forebrain | 5.03e-15 | 41 |
brain | 1.62e-14 | 68 |
future brain | 1.62e-14 | 68 |
cerebral hemisphere | 3.26e-13 | 32 |
neural plate | 7.40e-13 | 82 |
presumptive neural plate | 7.40e-13 | 82 |
brain grey matter | 1.35e-12 | 34 |
gray matter | 1.35e-12 | 34 |
telencephalon | 1.36e-12 | 34 |
nervous system | 1.55e-12 | 89 |
regional part of telencephalon | 5.54e-12 | 32 |
pre-chordal neural plate | 1.16e-11 | 61 |
ecto-epithelium | 1.75e-11 | 104 |
neurectoderm | 7.97e-11 | 86 |
ectoderm-derived structure | 2.58e-10 | 171 |
ectoderm | 2.58e-10 | 171 |
presumptive ectoderm | 2.58e-10 | 171 |
cerebral cortex | 6.43e-10 | 25 |
pallium | 6.43e-10 | 25 |
regional part of cerebral cortex | 6.99e-10 | 22 |
neocortex | 7.05e-09 | 20 |
structure with developmental contribution from neural crest | 1.03e-08 | 132 |
anatomical conduit | 2.18e-08 | 240 |