FFCP PHASE1:Hg19::chr20:32951056..32951067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83737 | |EntrezGene=83737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13890 | |HGNC=13890 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QP37,Q96J02 | |UniProt=Q5QP37,Q96J02 | ||
|association_with_transcript=0bp_to_NM_031483,uc002xak.2,uc010geu.1,uc010zuj.1_5end | |association_with_transcript=0bp_to_NM_031483,uc002xak.2,uc010geu.1,uc010zuj.1_5end | ||
|cluster_id=chr20:32951056..32951067,+ | |||
|coexpression_cluster_id=C429 | |coexpression_cluster_id=C429 | ||
|description=CAGE_peak_2_at_ITCH_5end | |description=CAGE_peak_2_at_ITCH_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-19!115;UBERON:0001049!1.02e-09!57;UBERON:0005068!1.02e-09!57;UBERON:0006241!1.02e-09!57;UBERON:0007135!1.02e-09!57;UBERON:0003080!1.83e-09!42;UBERON:0002780!5.28e-09!41;UBERON:0001890!5.28e-09!41;UBERON:0006240!5.28e-09!41;UBERON:0001893!1.08e-08!34;UBERON:0002020!1.56e-08!34;UBERON:0003528!1.56e-08!34;UBERON:0002616!1.90e-08!59;UBERON:0002791!3.60e-08!33;UBERON:0001869!5.60e-08!32;UBERON:0000955!2.51e-07!69;UBERON:0006238!2.51e-07!69;UBERON:0002619!4.22e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!2.61e-19!115;UBERON:0001049!1.02e-09!57;UBERON:0005068!1.02e-09!57;UBERON:0006241!1.02e-09!57;UBERON:0007135!1.02e-09!57;UBERON:0003080!1.83e-09!42;UBERON:0002780!5.28e-09!41;UBERON:0001890!5.28e-09!41;UBERON:0006240!5.28e-09!41;UBERON:0001893!1.08e-08!34;UBERON:0002020!1.56e-08!34;UBERON:0003528!1.56e-08!34;UBERON:0002616!1.90e-08!59;UBERON:0002791!3.60e-08!33;UBERON:0001869!5.60e-08!32;UBERON:0000955!2.51e-07!69;UBERON:0006238!2.51e-07!69;UBERON:0002619!4.22e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.88e-08;34!UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0001869;1.93e-07;32!UBERON:0003528;2.59e-07;34!UBERON:0002020;2.59e-07;34!UBERON:0002791;2.80e-07;32!UBERON:0002619;3.85e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001893;5.88e-08;34!UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0001869;1.93e-07;32!UBERON:0003528;2.59e-07;34!UBERON:0002020;2.59e-07;34!UBERON:0002791;2.80e-07;32!UBERON:0002619;3.85e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-20,114;UBERON:0000073,1.83e-10,53;UBERON:0002616,1.83e-10,53;UBERON:0001049,1.99e-10,56;UBERON:0005068,1.99e-10,56;UBERON:0006241,1.99e-10,56;UBERON:0007135,1.99e-10,56;UBERON:0002780,8.94e-10,41;UBERON:0001890,8.94e-10,41;UBERON:0003080,8.94e-10,41;UBERON:0006240,8.94e-10,41;UBERON:0001893,3.18e-09,34;UBERON:0003528,4.69e-09,34;UBERON:0002020,4.69e-09,34;UBERON:0001869,1.82e-08,32;UBERON:0002791,3.21e-08,32;UBERON:0000955,7.04e-08,68;UBERON:0006238,7.04e-08,68;UBERON:0002619,1.76e-07,22;UBERON:0010371,6.14e-07,104;UBERON:0001950,7.33e-07,20 | |||
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| ||
|short_description=p2@ITCH | |short_description=p2@ITCH | ||
}} | }} |
Latest revision as of 06:42, 25 September 2015
Short description: | p2@ITCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITCH_5end |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | 0bp_to_NM_031483, uc002xak.2, uc010geu.1, uc010zuj.1_5end |
EntrezGene: | ITCH |
HGNC: | 13890 |
UniProt: | Q5QP37Q96J02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-20 | 114 |
regional part of nervous system | 1.83e-10 | 53 |
regional part of brain | 1.83e-10 | 53 |
neural tube | 1.99e-10 | 56 |
neural rod | 1.99e-10 | 56 |
future spinal cord | 1.99e-10 | 56 |
neural keel | 1.99e-10 | 56 |
regional part of forebrain | 8.94e-10 | 41 |
forebrain | 8.94e-10 | 41 |
anterior neural tube | 8.94e-10 | 41 |
future forebrain | 8.94e-10 | 41 |
telencephalon | 3.18e-09 | 34 |
brain grey matter | 4.69e-09 | 34 |
gray matter | 4.69e-09 | 34 |
cerebral hemisphere | 1.82e-08 | 32 |
regional part of telencephalon | 3.21e-08 | 32 |
brain | 7.04e-08 | 68 |
future brain | 7.04e-08 | 68 |
regional part of cerebral cortex | 1.76e-07 | 22 |
ecto-epithelium | 6.14e-07 | 104 |
neocortex | 7.33e-07 | 20 |