FFCP PHASE1:Hg19::chr8:116681194..116681214,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |||
|association_with_transcript=13bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | |||
|cluster_id=chr8:116681194..116681214,- | |||
|coexpression_cluster_id=C2914 | |||
|description=CAGE_peak_1_at_TRPS1_5end | |||
|id=chr8:116681194..116681214,- | |||
|ontology_enrichment_celltype=CL:0002009!5.68e-24!65;CL:0002194!4.64e-23!63;CL:0000576!4.64e-23!63;CL:0000040!4.64e-23!63;CL:0000559!4.64e-23!63;CL:0002057!8.24e-23!42;CL:0000557!5.00e-19!71;CL:0000860!1.16e-18!45;CL:0000839!3.86e-17!70;CL:0000766!7.96e-16!76;CL:0002087!2.04e-12!119;CL:0000738!5.69e-10!140;CL:0002031!1.83e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.77e-20;33!CL:0002057;2.77e-20;33!CL:0000473;1.78e-18;39!CL:0000234;1.78e-18;39!CL:0000576;7.87e-16;48!CL:0000766;4.79e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.92e-27,61;CL:0002194,1.64e-26,59;CL:0000576,1.64e-26,59;CL:0000040,1.64e-26,59;CL:0000559,1.64e-26,59;CL:0000473,1.44e-24,48;CL:0000234,1.44e-24,48;CL:0000860,7.68e-23,42;CL:0002057,7.68e-23,42;CL:0000557,8.92e-22,67;CL:0000839,1.11e-19,66;CL:0000766,3.31e-18,72;CL:0002087,5.44e-14,115;CL:0000738,2.76e-11,136;CL:0002031,1.00e-10,120;CL:0000763,1.49e-07,108;CL:0000049,1.49e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.88e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.63e-21!115;UBERON:0001474!3.88e-18!86;UBERON:0002371!8.45e-18!80;UBERON:0004765!1.19e-17!101;UBERON:0001434!1.19e-17!101;UBERON:0001049!7.74e-16!57;UBERON:0005068!7.74e-16!57;UBERON:0006241!7.74e-16!57;UBERON:0007135!7.74e-16!57;UBERON:0002390!7.90e-15!102;UBERON:0003061!7.90e-15!102;UBERON:0003080!2.39e-13!42;UBERON:0002616!2.70e-13!59;UBERON:0002780!8.46e-13!41;UBERON:0001890!8.46e-13!41;UBERON:0006240!8.46e-13!41;UBERON:0000062!3.98e-11!511;UBERON:0002193!7.27e-11!112;UBERON:0000955!1.07e-10!69;UBERON:0006238!1.07e-10!69;UBERON:0002020!2.54e-10!34;UBERON:0003528!2.54e-10!34;UBERON:0001017!5.11e-10!82;UBERON:0001893!7.55e-10!34;UBERON:0002791!8.93e-10!33;UBERON:0002204!2.54e-09!167;UBERON:0001869!3.49e-09!32;UBERON:0005743!4.05e-09!86;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0000153!1.32e-08!129;UBERON:0007811!1.32e-08!129;UBERON:0000033!1.47e-08!123;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0004121!5.71e-07!169;UBERON:0000956!6.28e-07!25;UBERON:0000203!6.28e-07!25;UBERON:0002619!7.24e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.62e-09;41!UBERON:0001890;1.62e-09;41!UBERON:0003528;5.47e-09;34!UBERON:0002020;5.47e-09;34!UBERON:0002791;8.01e-09;32!UBERON:0001893;1.21e-08;34!UBERON:0001869;1.49e-08;32!UBERON:0000073;1.86e-08;53!UBERON:0002616;1.86e-08;53!UBERON:0000956;5.24e-07;25!UBERON:0000203;5.24e-07;25!UBERON:0002619;6.06e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-20,114;UBERON:0001474,1.89e-20,82;UBERON:0002371,2.99e-20,76;UBERON:0001434,1.42e-19,100;UBERON:0004765,5.23e-19,90;UBERON:0002390,1.20e-16,98;UBERON:0003061,1.20e-16,98;UBERON:0001049,2.58e-15,56;UBERON:0005068,2.58e-15,56;UBERON:0006241,2.58e-15,56;UBERON:0007135,2.58e-15,56;UBERON:0000073,9.90e-14,53;UBERON:0002616,9.90e-14,53;UBERON:0002405,8.12e-13,93;UBERON:0002780,8.15e-13,41;UBERON:0001890,8.15e-13,41;UBERON:0003080,8.15e-13,41;UBERON:0006240,8.15e-13,41;UBERON:0002193,2.94e-12,108;UBERON:0002204,1.69e-10,167;UBERON:0003528,2.47e-10,34;UBERON:0002020,2.47e-10,34;UBERON:0000955,3.03e-10,68;UBERON:0006238,3.03e-10,68;UBERON:0001893,7.35e-10,34;UBERON:0001017,1.33e-09,81;UBERON:0002791,1.59e-09,32;UBERON:0001869,3.40e-09,32;UBERON:0001016,4.49e-09,89;UBERON:0003075,3.20e-08,82;UBERON:0007284,3.20e-08,82;UBERON:0010371,2.14e-07,104;UBERON:0000956,6.16e-07,25;UBERON:0000203,6.16e-07,25;UBERON:0002346,6.61e-07,86;UBERON:0002619,7.11e-07,22 | |||
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| |||
|short_description=p1@TRPS1 | |||
}} |
Latest revision as of 06:41, 25 September 2015
Short description: | p1@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPS1_5end |
Coexpression cluster: | C2914_CD14_breast_small_spinal_osteosarcoma_skin_Macrophage |
Association with transcript: | 13bp_to_ENST00000395715, NM_014112, uc003yny.2, uc003ynz.2, uc010mcy.2_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.92e-27 | 61 |
monopoietic cell | 1.64e-26 | 59 |
monocyte | 1.64e-26 | 59 |
monoblast | 1.64e-26 | 59 |
promonocyte | 1.64e-26 | 59 |
defensive cell | 1.44e-24 | 48 |
phagocyte | 1.44e-24 | 48 |
classical monocyte | 7.68e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.68e-23 | 42 |
granulocyte monocyte progenitor cell | 8.92e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.11e-19 | 66 |
myeloid leukocyte | 3.31e-18 | 72 |
nongranular leukocyte | 5.44e-14 | 115 |
leukocyte | 2.76e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.00e-10 | 120 |
myeloid cell | 1.49e-07 | 108 |
common myeloid progenitor | 1.49e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.64e-20 | 114 |
bone element | 1.89e-20 | 82 |
bone marrow | 2.99e-20 | 76 |
skeletal system | 1.42e-19 | 100 |
skeletal element | 5.23e-19 | 90 |
hematopoietic system | 1.20e-16 | 98 |
blood island | 1.20e-16 | 98 |
neural tube | 2.58e-15 | 56 |
neural rod | 2.58e-15 | 56 |
future spinal cord | 2.58e-15 | 56 |
neural keel | 2.58e-15 | 56 |
regional part of nervous system | 9.90e-14 | 53 |
regional part of brain | 9.90e-14 | 53 |
immune system | 8.12e-13 | 93 |
regional part of forebrain | 8.15e-13 | 41 |
forebrain | 8.15e-13 | 41 |
anterior neural tube | 8.15e-13 | 41 |
future forebrain | 8.15e-13 | 41 |
hemolymphoid system | 2.94e-12 | 108 |
musculoskeletal system | 1.69e-10 | 167 |
brain grey matter | 2.47e-10 | 34 |
gray matter | 2.47e-10 | 34 |
brain | 3.03e-10 | 68 |
future brain | 3.03e-10 | 68 |
telencephalon | 7.35e-10 | 34 |
central nervous system | 1.33e-09 | 81 |
regional part of telencephalon | 1.59e-09 | 32 |
cerebral hemisphere | 3.40e-09 | 32 |
nervous system | 4.49e-09 | 89 |
neural plate | 3.20e-08 | 82 |
presumptive neural plate | 3.20e-08 | 82 |
ecto-epithelium | 2.14e-07 | 104 |
cerebral cortex | 6.16e-07 | 25 |
pallium | 6.16e-07 | 25 |
neurectoderm | 6.61e-07 | 86 |
regional part of cerebral cortex | 7.11e-07 | 22 |