FFCP PHASE1:Hg19::chr16:23846966..23846987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5579 | |EntrezGene=5579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9395 | |HGNC=9395 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P05771 | |UniProt=P05771 | ||
|association_with_transcript=-312bp_to_NM_002738,NM_212535,uc002dmd.2,uc002dme.2_5end | |association_with_transcript=-312bp_to_NM_002738,NM_212535,uc002dmd.2,uc002dme.2_5end | ||
|cluster_id=chr16:23846966..23846987,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_7_at_PRKCB_5end | |description=CAGE_peak_7_at_PRKCB_5end |
Latest revision as of 06:38, 25 September 2015
Short description: | p7@PRKCB |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -312bp_to_NM_002738, NM_212535, uc002dmd.2, uc002dme.2_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | P05771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@PRKCB |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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regional part of cerebral cortex | 2.52e-87 | 22 |
neocortex | 5.96e-85 | 20 |
cerebral cortex | 6.81e-77 | 25 |
pallium | 6.81e-77 | 25 |
cerebral hemisphere | 4.09e-75 | 32 |
telencephalon | 1.26e-70 | 34 |
regional part of telencephalon | 2.96e-67 | 32 |
brain grey matter | 3.18e-63 | 34 |
gray matter | 3.18e-63 | 34 |
regional part of forebrain | 2.80e-58 | 41 |
Showing 1 to 10 of 57 entries