FFCP PHASE1:Hg19::chr7:115608319..115608352,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:115608319..115608352,- to FFCP PHASE1:Hg19::chr7:115608319..115608352,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22797 | |EntrezGene=22797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11754 | |HGNC=11754 | ||
|TSSclassifier=strong | |||
|UniProt=O14948 | |UniProt=O14948 | ||
|association_with_transcript=14bp_to_ENST00000497829,NM_001244583,uc003vhm.1_5end | |||
|cluster_id=chr7:115608319..115608352,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_4_at_TFEC_5end | |||
|id=chr7:115608319..115608352,- | |||
|ontology_enrichment_celltype=CL:0002563!1.37e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.97e-14;4!CL:0002253;6.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.97e-14,4;CL:0002253,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;8.60e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.08e-18!27;UBERON:0005409!4.35e-14!35;UBERON:0000059!2.05e-12!11;UBERON:0001301!8.91e-10!1;UBERON:0001242!1.37e-09!4;UBERON:0001262!1.37e-09!4;UBERON:0004786!1.37e-09!4;UBERON:0004808!1.37e-09!4;UBERON:0001277!1.37e-09!4;UBERON:0001052!2.57e-09!4;UBERON:0001155!5.37e-09!9;UBERON:0003350!7.71e-08!5;UBERON:0004907!1.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.12e-35;17!UBERON:0005409;7.66e-28;22!UBERON:0002108;8.01e-25;4!UBERON:0004921;1.79e-17;33!UBERON:0001301;1.97e-14;1!UBERON:0001242;1.97e-14;4!UBERON:0001262;1.97e-14;4!UBERON:0004786;1.97e-14;4!UBERON:0004808;1.97e-14;4!UBERON:0001277;1.97e-14;4!UBERON:0001155;9.16e-14;9!UBERON:0000059;2.26e-11;11!UBERON:0000485;1.22e-08;7!UBERON:0003929;1.22e-08;7!UBERON:0003350;1.15e-07;8!UBERON:0001555;1.65e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-35,17;UBERON:0002108,8.01e-25,4;UBERON:0005409,1.44e-24,25;UBERON:0001301,1.84e-14,1;UBERON:0001242,1.97e-14,4;UBERON:0001262,1.97e-14,4;UBERON:0004786,1.97e-14,4;UBERON:0004808,1.97e-14,4;UBERON:0001277,1.97e-14,4;UBERON:0001155,9.57e-14,9;UBERON:0000059,2.34e-11,11;UBERON:0004921,4.23e-08,118;UBERON:0003350,1.15e-07,8;UBERON:0000485,6.60e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.7884736236083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2614150518114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,1.06149077404007,5.49927130440263,0,0,0,0,0,0,0,0,0,0,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0518900941469,3.19972987623488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21917924982269,0,0,0,0,0,0,0,0,0,0,6.79132591349913,34.3138509991213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.7884736236083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2614150518114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,1.06149077404007,5.49927130440263,0,0,0,0,0,0,0,0,0,0,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0518900941469,3.19972987623488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21917924982269,0,0,0,0,0,0,0,0,0,0,6.79132591349913,34.3138509991213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TFEC | |||
}} | }} |
Latest revision as of 06:37, 25 September 2015
Short description: | p4@TFEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TFEC_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 14bp_to_ENST00000497829, NM_001244583, uc003vhm.1_5end |
EntrezGene: | TFEC |
HGNC: | 11754 |
UniProt: | O14948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.97e-14 | 4 |
epithelial cell of large intestine | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-35 | 17 |
small intestine | 8.01e-25 | 4 |
gastrointestinal system | 1.44e-24 | 25 |
epididymis | 1.84e-14 | 1 |
intestinal mucosa | 1.97e-14 | 4 |
wall of intestine | 1.97e-14 | 4 |
gastrointestinal system mucosa | 1.97e-14 | 4 |
gastrointestinal system epithelium | 1.97e-14 | 4 |
intestinal epithelium | 1.97e-14 | 4 |
colon | 9.57e-14 | 9 |
large intestine | 2.34e-11 | 11 |
subdivision of digestive tract | 4.23e-08 | 118 |
epithelium of mucosa | 1.15e-07 | 8 |
simple columnar epithelium | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.60e-08 | 2 |