FFCP PHASE1:Hg19::chrX:47442814..47442835,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7076 | |EntrezGene=7076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11820 | |HGNC=11820 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FGX5 | |UniProt=Q6FGX5 | ||
|association_with_transcript=0bp_to_CR407638,CR541982,CU674426_5end | |association_with_transcript=0bp_to_CR407638,CR541982,CU674426_5end | ||
|cluster_id=chrX:47442814..47442835,+ | |||
|coexpression_cluster_id=C315 | |coexpression_cluster_id=C315 | ||
|description=CAGE_peak_6_at_TIMP1_5end | |description=CAGE_peak_6_at_TIMP1_5end | ||
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|ontology_enrichment_celltype=CL:0000048!2.66e-24!430;CL:0000723!6.22e-23!436;CL:0000034!3.35e-21!444;CL:0000055!3.45e-17!180;CL:0002320!1.43e-14!365;CL:0000134!2.36e-13!358;CL:0002371!1.65e-12!591;CL:0000680!7.87e-12!57;CL:0000056!7.87e-12!57;CL:0000355!7.87e-12!57;CL:0002057!8.54e-12!42;CL:0000057!9.90e-12!75;CL:0000860!3.76e-11!45;CL:0000187!7.15e-11!54;CL:0000183!1.90e-10!59;CL:0000144!4.48e-10!625;CL:0000192!1.81e-09!42;CL:0000514!1.81e-09!42;CL:0000219!3.55e-09!390;CL:0000766!4.02e-09!76;CL:0000393!7.18e-09!60;CL:0000211!7.18e-09!60;CL:0000359!1.56e-08!32;CL:0002194!3.56e-08!63;CL:0000576!3.56e-08!63;CL:0000040!3.56e-08!63;CL:0000559!3.56e-08!63;CL:0000839!4.33e-08!70;CL:0000557!1.10e-07!71;CL:0002334!1.83e-07!12;CL:0002009!2.48e-07!65;CL:0002494!5.93e-07!16 | |ontology_enrichment_celltype=CL:0000048!2.66e-24!430;CL:0000723!6.22e-23!436;CL:0000034!3.35e-21!444;CL:0000055!3.45e-17!180;CL:0002320!1.43e-14!365;CL:0000134!2.36e-13!358;CL:0002371!1.65e-12!591;CL:0000680!7.87e-12!57;CL:0000056!7.87e-12!57;CL:0000355!7.87e-12!57;CL:0002057!8.54e-12!42;CL:0000057!9.90e-12!75;CL:0000860!3.76e-11!45;CL:0000187!7.15e-11!54;CL:0000183!1.90e-10!59;CL:0000144!4.48e-10!625;CL:0000192!1.81e-09!42;CL:0000514!1.81e-09!42;CL:0000219!3.55e-09!390;CL:0000766!4.02e-09!76;CL:0000393!7.18e-09!60;CL:0000211!7.18e-09!60;CL:0000359!1.56e-08!32;CL:0002194!3.56e-08!63;CL:0000576!3.56e-08!63;CL:0000040!3.56e-08!63;CL:0000559!3.56e-08!63;CL:0000839!4.33e-08!70;CL:0000557!1.10e-07!71;CL:0002334!1.83e-07!12;CL:0002009!2.48e-07!65;CL:0002494!5.93e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-12;33!CL:0002057;2.80e-12;33!CL:0002334;4.73e-10;12!CL:0002494;1.02e-09;16!CL:0000134;2.33e-09;55!CL:0000048;3.87e-09;58!CL:0000723;5.85e-09;61!CL:0000473;8.68e-09;39!CL:0000234;8.68e-09;39!CL:0000359;3.60e-08;32!CL:0000576;3.22e-07;48!CL:0000192;9.66e-07;43 | |ontology_enrichment_celltype_v019=CL:0000860;2.80e-12;33!CL:0002057;2.80e-12;33!CL:0002334;4.73e-10;12!CL:0002494;1.02e-09;16!CL:0000134;2.33e-09;55!CL:0000048;3.87e-09;58!CL:0000723;5.85e-09;61!CL:0000473;8.68e-09;39!CL:0000234;8.68e-09;39!CL:0000359;3.60e-08;32!CL:0000576;3.22e-07;48!CL:0000192;9.66e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.03e-29,427;CL:0000723,2.05e-28,433;CL:0000034,9.57e-27,441;CL:0002320,2.20e-19,361;CL:0000134,1.22e-18,354;CL:0000219,7.19e-14,386;CL:0000057,8.87e-13,76;CL:0000680,2.31e-10,58;CL:0000056,2.31e-10,58;CL:0000355,2.31e-10,58;CL:0000860,2.51e-10,42;CL:0002057,2.51e-10,42;CL:0002334,6.75e-10,12;CL:0002494,1.26e-09,16;CL:0000187,3.40e-09,55;CL:0000473,3.73e-09,48;CL:0000234,3.73e-09,48;CL:0000192,7.69e-09,43;CL:0000514,7.69e-09,43;CL:0000359,1.30e-08,32;CL:0000766,3.76e-08,72;CL:0002194,8.80e-08,59;CL:0000576,8.80e-08,59;CL:0000040,8.80e-08,59;CL:0000559,8.80e-08,59;CL:0000839,2.10e-07,66;CL:0000393,2.79e-07,61;CL:0000211,2.79e-07,61;CL:0002009,3.30e-07,61;CL:0000557,3.83e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;6.41e-08;42!CL:0000514;9.66e-07;43 | |ontology_enrichment_development_v019=CL:0002057;6.41e-08;42!CL:0000514;9.66e-07;43 | ||
|ontology_enrichment_disease=DOID:2394!3.25e-07!14 | |ontology_enrichment_disease=DOID:2394!3.25e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.53e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;2.53e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.11e-09,14 | |||
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|phase1_expression=10.1739892391512,4.28201047781966,17.9012093201883,4.00293193412522,8.93922188854576,9.59572376510406,10.1319951267324,17.6881564559513,8.61912573059467,1.96587149201207,0,0.218441372130172,0,0.990130823680373,2.65117900582333,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.464448369948228,1.83884244895785,0.90361775633475,2.9580320813343,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,1.79132379391939,1.29557466407592,2.83333124397605,5.23433659606433,3.40088349319928,3.63876091781724,4.41615170120801,2.05583944010913,3.09706370895104,2.58923153089935,0.768482119587302,0.47296445977717,4.13694816883942,5.16387746867061,6.77132432971709,9.03563229804502,10.0975275521403,2.9214052977861,21.1197885735923,15.7255223267286,15.344091019177,0.989553900560148,3.78980949481101,1.70489900213078,5.22376629531451,2.8369261234557,5.60540024096017,2.00998932205395,1.0429658368404,1.52032191293582,1.21079900526674,4.05105399586321,2.53169909952708,1.05627643155971,2.33864729961548,0.838634582033504,0.561643155732475,0.300353785683013,1.12507910687956,0.570025487482497,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,1.55974639639243,0,0,0,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0,0,0,0.566546713487831,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,17.0664806419773,13.4140171940727,3.06870148424473,1.80719576192283,3.50936537445123,2.60723734129483,5.5670016293577,4.37971383272372,0.378139268656271,0.665188192387692,0.527008714158756,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0,7.9515512271251,2.91250176828533,1.45650098894541,20.6522366939146,8.86670955495893,1.68203280042692,0,2.4666754841716,7.15785381419462,2.15537075311501,2.61539044981534,0.756787138224657,0,0.234321431833797,4.99456122928513,1.71141546463335,2.83952493048422,0.23486899728753,0.323745888736263,0.421352420106746,1.22492502752936,0.122834317311768,1.03325781175765,7.12801714369232,7.66527480763526,3.64064544775211,7.90479955997862,0.168336113954066,0.375355559615893,0.554128230968366,3.5118209670467,3.98434134538726,8.56356935767602,1.58805056424029,0.717558542755448,2.13557388818567,2.33125091275518,2.10063767259082,3.7098910525838,1.03056216018252,1.30281799432113,0.843881661206331,1.94874010322397,0,1.56484827691909,4.36444353410792,0.710019185033229,1.61203357164224,0.339121184620975,0,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,3.85944562915731,2.76269842704961,1.39310378409594,2.16563844500876,0.118306800039844,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,7.01208869017229,0.8231480226628,1.47008711385542,0,0,3.54473944008842,0,0.122988438543114,1.02940686179115,0,0,0.201057944823262,0.277765335475589,0,2.07986957055916,1.44331342025273,0.463721619900307,1.05667824812239,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.503946384596579,0.141775097242386,0,0,0.383382679165211,0.985326475791887,0.704387472105808,2.90259361757081,1.00883967391873,1.51490920111656,0,1.14596527667483,4.68869788840188,0,0,0.901029173531752,0,0.224262168690721,0.87192013766656,0.07333828582095,7.62703122970889,7.15312891703765,6.762422020448,0.531876233169741,0,0.771622122786426,1.41849132023278,1.0656887160644,1.85871391755592,2.17048642156577,1.64648067356154,2.93162565864362,0.355391948742546,3.95975936466715,0.904318131178758,2.61460037580088,1.29964888536674,1.2162378064119,0,2.10833939483032,0.718874566474748,0,2.85273810081437,2.17171960001369,5.75333703141074,1.79060963239896,0,0,0.215627574859517,0,2.28685161800217,2.60279707715243,0,0.335032530668698,0,0,5.9832291840805,1.65766205374414,1.10422342547226,3.50119364741774,0.542530047399471,0.415941723061614,0.892144943985809,0.315404830067869,3.74852527976682,7.52365249319297,77.3185513790349,4.1389228517002,0,1.65932251687533,4.77859879574456,0.587403472388222,2.05886054286514,0,0.431428401637234,0.320182673410333,0.909382714338778,1.66435439510497,0.604780586659361,30.7653681695283,2.30192959932094,6.73584226639377,55.7405299262299,12.2809739776009,13.3508754549194,20.7785293022987,2.00472601943452,10.2985800681614,1.31403449622095,6.23105315020345,2.5566283261191,0,0.40101294060657,3.86740153530765,9.29997030133315,4.00600569614778,23.3401458627775,0.451199612907412,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,2.06082023295445,0.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| ||
|short_description=p6@TIMP1 | |short_description=p6@TIMP1 | ||
}} | }} |
Latest revision as of 06:33, 25 September 2015
Short description: | p6@TIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TIMP1_5end |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | 0bp_to_CR407638, CR541982, CU674426_5end |
EntrezGene: | TIMP1 |
HGNC: | 11820 |
UniProt: | Q6FGX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.03e-29 | 427 |
somatic stem cell | 2.05e-28 | 433 |
stem cell | 9.57e-27 | 441 |
connective tissue cell | 2.20e-19 | 361 |
mesenchymal cell | 1.22e-18 | 354 |
motile cell | 7.19e-14 | 386 |
fibroblast | 8.87e-13 | 76 |
muscle precursor cell | 2.31e-10 | 58 |
myoblast | 2.31e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.31e-10 | 58 |
classical monocyte | 2.51e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.51e-10 | 42 |
preadipocyte | 6.75e-10 | 12 |
cardiocyte | 1.26e-09 | 16 |
muscle cell | 3.40e-09 | 55 |
defensive cell | 3.73e-09 | 48 |
phagocyte | 3.73e-09 | 48 |
smooth muscle cell | 7.69e-09 | 43 |
smooth muscle myoblast | 7.69e-09 | 43 |
vascular associated smooth muscle cell | 1.30e-08 | 32 |
myeloid leukocyte | 3.76e-08 | 72 |
monopoietic cell | 8.80e-08 | 59 |
monocyte | 8.80e-08 | 59 |
monoblast | 8.80e-08 | 59 |
promonocyte | 8.80e-08 | 59 |
myeloid lineage restricted progenitor cell | 2.10e-07 | 66 |
electrically responsive cell | 2.79e-07 | 61 |
electrically active cell | 2.79e-07 | 61 |
macrophage dendritic cell progenitor | 3.30e-07 | 61 |
granulocyte monocyte progenitor cell | 3.83e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.11e-09 | 14 |