FFCP PHASE1:Hg19::chr1:103574068..103574099,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1301 | |EntrezGene=1301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2186 | |HGNC=2186 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5Z5,P12107,Q59HB5,E9PCU0,Q149N0 | |UniProt=F5H5Z5,P12107,Q59HB5,E9PCU0,Q149N0 | ||
|association_with_transcript=-16bp_to_ENST00000353414,ENST00000358392,ENST00000370090,NM_001190709,NM_001854,NM_080629,NM_080630,uc001dul.2,uc001dum.2,uc001dun.2,uc009weh.2_5end | |association_with_transcript=-16bp_to_ENST00000353414,ENST00000358392,ENST00000370090,NM_001190709,NM_001854,NM_080629,NM_080630,uc001dul.2,uc001dum.2,uc001dun.2,uc009weh.2_5end | ||
|cluster_id=chr1:103574068..103574099,- | |||
|coexpression_cluster_id=C2510 | |||
|description=CAGE_peak_2_at_COL11A1_5end | |description=CAGE_peak_2_at_COL11A1_5end | ||
|id=chr1:103574068..103574099,- | |id=chr1:103574068..103574099,- | ||
|ontology_enrichment_celltype=CL:0000055!5.32e-22!180;CL:0000325!6.54e-10!39;CL:0000133!7.18e-08!59;CL:0000057!1.43e-07!75;CL:0000075!3.44e-07!27 | |ontology_enrichment_celltype=CL:0000055!5.32e-22!180;CL:0000325!6.54e-10!39;CL:0000133!7.18e-08!59;CL:0000057!1.43e-07!75;CL:0000075!3.44e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000075;3.19e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,2.75e-08,27;CL:0000133,2.46e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.39e-21!86;UBERON:0000073!9.60e-21!94;UBERON:0001016!9.60e-21!94;UBERON:0004121!6.38e-20!169;UBERON:0001017!1.08e-19!82;UBERON:0000924!3.42e-19!173;UBERON:0006601!3.42e-19!173;UBERON:0000475!1.28e-17!365;UBERON:0003075!3.08e-16!86;UBERON:0007284!3.08e-16!86;UBERON:0000033!4.37e-16!123;UBERON:0000153!1.46e-15!129;UBERON:0007811!1.46e-15!129;UBERON:0002346!3.44e-15!90;UBERON:0002616!4.30e-15!59;UBERON:0000955!6.87e-15!69;UBERON:0006238!6.87e-15!69;UBERON:0003056!2.85e-13!61;UBERON:0001049!3.11e-13!57;UBERON:0005068!3.11e-13!57;UBERON:0006241!3.11e-13!57;UBERON:0007135!3.11e-13!57;UBERON:0002780!1.46e-10!41;UBERON:0001890!1.46e-10!41;UBERON:0006240!1.46e-10!41;UBERON:0003080!5.60e-10!42;UBERON:0002020!9.67e-10!34;UBERON:0003528!9.67e-10!34;UBERON:0001893!1.50e-09!34;UBERON:0002791!2.26e-09!33;UBERON:0001869!2.86e-09!32;UBERON:0000481!3.05e-09!347;UBERON:0007625!2.10e-08!11;UBERON:0000956!7.77e-08!25;UBERON:0000203!7.77e-08!25 | |ontology_enrichment_uberon=UBERON:0005743!1.39e-21!86;UBERON:0000073!9.60e-21!94;UBERON:0001016!9.60e-21!94;UBERON:0004121!6.38e-20!169;UBERON:0001017!1.08e-19!82;UBERON:0000924!3.42e-19!173;UBERON:0006601!3.42e-19!173;UBERON:0000475!1.28e-17!365;UBERON:0003075!3.08e-16!86;UBERON:0007284!3.08e-16!86;UBERON:0000033!4.37e-16!123;UBERON:0000153!1.46e-15!129;UBERON:0007811!1.46e-15!129;UBERON:0002346!3.44e-15!90;UBERON:0002616!4.30e-15!59;UBERON:0000955!6.87e-15!69;UBERON:0006238!6.87e-15!69;UBERON:0003056!2.85e-13!61;UBERON:0001049!3.11e-13!57;UBERON:0005068!3.11e-13!57;UBERON:0006241!3.11e-13!57;UBERON:0007135!3.11e-13!57;UBERON:0002780!1.46e-10!41;UBERON:0001890!1.46e-10!41;UBERON:0006240!1.46e-10!41;UBERON:0003080!5.60e-10!42;UBERON:0002020!9.67e-10!34;UBERON:0003528!9.67e-10!34;UBERON:0001893!1.50e-09!34;UBERON:0002791!2.26e-09!33;UBERON:0001869!2.86e-09!32;UBERON:0000481!3.05e-09!347;UBERON:0007625!2.10e-08!11;UBERON:0000956!7.77e-08!25;UBERON:0000203!7.77e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001017;1.05e-09;75!UBERON:0003528;1.77e-09;34!UBERON:0002020;1.77e-09;34!UBERON:0001869;2.18e-09;32!UBERON:0002791;2.20e-09;32!UBERON:0001893;2.47e-09;34!UBERON:0007625;2.82e-09;11!UBERON:0000073;7.53e-09;53!UBERON:0002616;7.53e-09;53!UBERON:0002780;9.11e-09;41!UBERON:0001890;9.11e-09;41!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0000955;5.95e-08;68!UBERON:0006876;1.75e-07;11!UBERON:0001016;2.02e-07;83!UBERON:0002619;7.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-23,81;UBERON:0001016,1.20e-20,89;UBERON:0004121,4.62e-18,171;UBERON:0000924,4.62e-18,171;UBERON:0006601,4.62e-18,171;UBERON:0000955,9.00e-18,68;UBERON:0006238,9.00e-18,68;UBERON:0003075,1.10e-17,82;UBERON:0007284,1.10e-17,82;UBERON:0002346,9.90e-17,86;UBERON:0003056,8.62e-16,61;UBERON:0001049,1.45e-15,56;UBERON:0005068,1.45e-15,56;UBERON:0006241,1.45e-15,56;UBERON:0007135,1.45e-15,56;UBERON:0000073,2.48e-14,53;UBERON:0002616,2.48e-14,53;UBERON:0010371,6.32e-14,104;UBERON:0010314,8.73e-13,132;UBERON:0002780,8.51e-12,41;UBERON:0001890,8.51e-12,41;UBERON:0003080,8.51e-12,41;UBERON:0006240,8.51e-12,41;UBERON:0003528,7.10e-11,34;UBERON:0002020,7.10e-11,34;UBERON:0001893,1.17e-10,34;UBERON:0001869,2.41e-10,32;UBERON:0002791,2.69e-10,32;UBERON:0007625,2.86e-09,11;UBERON:0000956,9.85e-09,25;UBERON:0000203,9.85e-09,25;UBERON:0011216,1.45e-07,223;UBERON:0006876,1.73e-07,11;UBERON:0002619,6.60e-07,22 | |||
|phase1_expression=95.7445058755833,107.478462993274,94.8623139565886,132.096753826132,70.1728918250842,19.1914475302081,37.9949817252466,10.7392378482561,0.783556884599516,0.245733936501509,0,0,0.527533956456907,63.739671774424,88.4830993193535,0,0,0,0,10.0959267622966,19.5840663594483,17.5534644027729,80.718548370958,53.6547746285706,101.061824873816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.45228916977532,4.69870898099936,5.51471701699479,19.8439730976328,229.042352750717,477.388807766886,107.580621932709,98.4478524733784,80.5444984805966,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,60.6305781068289,0,0,0.573673241497627,1.41867352879343,12.3349072031308,1.06748995729705,1.2333377420858,1.24484414159907,0.67355336034844,0.163461903113459,187.683210279715,212.60891613312,1.17160715916898,0,0,0.149448680551801,0.704606991862589,0.485618833104395,0,2.24569588380383,5.52754427902956,4.44300859055791,48.7081171485642,58.8495291682965,0,0,1.17835279767846,1.50142223846357,0.554128230968366,13.608306247306,19.9217067269363,39.512609492435,0.113432183160021,121.626172997048,102.934661410549,5.29829752898905,0,0.309157587715317,74.7157566132325,43.551344381592,1.35021065793013,0.779496041289589,6.56327813034698,10.6777882425067,1.61646056818812,97.6276379420689,33.4496966115766,15.5995744925649,0,0,0,1.34171076742555,1.59035721985782,4.76395165765025,10.1587833915063,2.52320850875628,1.45990943630332,45.3703643756466,80.4051172741107,20.7202382028721,96.1241611026197,46.9221663085231,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,4.41026134156626,0,0,0,0,0,65.1957679134397,0.109750285408626,0,0.100528972411631,0.185176890317059,0.325808305310325,0,50.5159697088456,66.3121916457439,251.48942305313,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0,0.12624243342638,1.39695367442772,8.40374536228211,3.51652341630141,1.71072446022705,19.7428785990381,14.716809834352,26.8676846672744,10.2039286754278,81.5245328718234,6.82046058134835,28.6983208982267,21.4593867511129,2.535908257668,3.98907174877306,2.08014873822732,4.11531798819427,5.67396528093113,2.66422179016099,1.28680194292333,89.5325648895881,18.9345277459577,1.30294473717494,1.06617584622764,7.12756685640086,0.301439377059586,0,0,0,0,0,101.600938728431,110.267458400749,1.42636905040718,19.8350390134584,12.5340556755734,17.5479743975098,0,0,0,0,72.6710625276245,42.9461517730152,7.73288812777695,10.3860084507296,5.74144876487847,0,0,0,154.468588074397,61.5209740903403,65.9174007590357,5.40724239980099,16.9507539357304,17.8203728988346,37.0166871376974,275.365681250863,136.444502433591,85.8826491727791,28.5617007370238,25.6273144272967,17.4636065080847,35.0484071858306,30.882908142977,0,0,0,0,0,3.32629322662648,76.9134204238208,406.674229213365,106.650835884568,37.8010490304318,185.238024162147,73.0276801991978,1.48418066444991,1.07946785661859,1.06537035187876,0.739144404124282,0.519254429183621,0.464841513839837,0,0.200506470303285,0,1.49258782613989,0.182091168006717,12.063446176267,1.35359883872224,0.847168708148562,0.784349769176855,1.46139224653261,6.9664075069298,0,0,0.647747748306418,0,1.35473218771926,2.50844886927427,4.07802036872061,0,5.82074362277664,0,0,37.1852681418764,47.890138272157,62.1472733808819,0.618246069886334,106.495287583733,83.0045569201115,0,0.650060246036521,0,3.38347514022427,8.93481979264937,13.8153307253517,5.09995318192763,49.4133126394059,64.8224621796601,5.88063729171096,22.9702651968582,0,0,0,0,0,2.20368642781448,0,9.54904098545875,0,0,0.37064843820784,0,123.928736996769,117.693145995366,62.5267036070145,5.88564920016068,91.578943439259,0.318203247925937,0,18.7067355886647,7.96157386234559,5.1837457032102,0,0,2.10629228119491,0,0,0,1.22849920267187,7.21167702963935,0,0,0,0.438450885253763,4.6302042741335,43.9449483871244,15.8270094030909,12.0831164258903,5.07052084558035,12.0465535851403,20.3375514897161,15.3368552136938,27.316601933436,0.633322905892992,0.987884678879706,0,4.54915136318478,0,1.34060455107157,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,124.343218792379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.0054474528104,0,0,7.04935025439248,0,1.17206543417515,129.73439775023,0,0,1.67121139316383,0.296964680832639,0,5.96488588659779,5.06409899077846,0,0,0,1.79323189425963,0.276283915531148,0,94.2917252669867,0,18.0402960843848,0,0,0,0,0,0,2.90799823828566,2.69027484669369,7.98455192004777,0,0,0,0,0,0,0,0,1.90987494426621,4.42870692906919,5.78862905401958,0,2.76448149828062,1.18219047581419,10.5304990633907,0,0,0.615602068030377,33.4989644190183,0,0,0,1.27600463892768,0.366390373607449,0,0,0,0,0,0,0,0,2.70192184266644,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,3.43745778201453,18.4592858878721,3.04543779442941,0,0,0,0.394584402849391,0,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| ||
|short_description=p2@COL11A1 | |short_description=p2@COL11A1 | ||
}} | }} |
Latest revision as of 06:32, 25 September 2015
Short description: | p2@COL11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL11A1_5end |
Coexpression cluster: | C2510_Preadipocyte_Chondrocyte_Osteoblast_Wilms_rhabdomyosarcoma_adrenal_Lens |
Association with transcript: | -16bp_to_ENST00000353414, ENST00000358392, ENST00000370090, NM_001190709, NM_001854, NM_080629, NM_080630, uc001dul.2, uc001dum.2, uc001dun.2, uc009weh.2_5end |
EntrezGene: | COL11A1 |
HGNC: | 2186 |
UniProt: | F5H5Z5P12107Q59HB5E9PCU0Q149N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 2.75e-08 | 27 |
neurectodermal cell | 2.46e-07 | 59 |