FFCP PHASE1:Hg19::chrX:47441825..47441846,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:47441825..47441846,+ to FFCP PHASE1:Hg19::chrX:47441825..47441846,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7076 | |EntrezGene=7076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11820 | |HGNC=11820 | ||
|TSSclassifier=strong | |||
|UniProt=Q5H9A7 | |UniProt=Q5H9A7 | ||
|association_with_transcript=-2bp_to_ENST00000377017_5end | |||
|cluster_id=chrX:47441825..47441846,+ | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_1_at_TIMP1_5end | |||
|id=chrX:47441825..47441846,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-33!180;CL:0002371!4.00e-26!591;CL:0000048!5.48e-26!430;CL:0000723!1.06e-24!436;CL:0000034!1.91e-22!444;CL:0000144!5.65e-22!625;CL:0000680!8.37e-20!57;CL:0000056!8.37e-20!57;CL:0000355!8.37e-20!57;CL:0000057!1.49e-19!75;CL:0000183!6.98e-19!59;CL:0000187!1.00e-18!54;CL:0000548!5.55e-16!679;CL:0000004!5.55e-16!679;CL:0000255!5.55e-16!679;CL:0000192!1.23e-15!42;CL:0000514!1.23e-15!42;CL:0000012!1.84e-15!682;CL:0000393!2.91e-14!60;CL:0000211!2.91e-14!60;CL:0002320!2.76e-13!365;CL:0000359!1.51e-12!32;CL:0000222!3.65e-12!119;CL:0000134!5.60e-12!358;CL:0000219!3.27e-09!390;CL:0002494!1.67e-08!16;CL:0000003!1.78e-08!722;CL:0002057!9.93e-08!42;CL:0002334!1.03e-07!12;CL:0002620!1.72e-07!23;CL:0000860!2.41e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.67e-12;32!CL:0000192;1.11e-11;43!CL:0000187;1.10e-10;55!CL:0000134;2.57e-09;55!CL:0002494;1.67e-08;16!CL:0000723;2.03e-08;61!CL:0000048;2.43e-08;58!CL:0000393;5.85e-08;61!CL:0000211;5.85e-08;61!CL:0000057;6.30e-08;73!CL:0002334;1.03e-07;12!CL:0000860;1.22e-07;33!CL:0002057;1.22e-07;33!CL:0002620;1.72e-07;23!CL:0002320;4.14e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.96e-26,427;CL:0000723,7.72e-25,433;CL:0000034,1.43e-22,441;CL:0000057,4.40e-20,76;CL:0000680,7.62e-20,58;CL:0000056,7.62e-20,58;CL:0000355,7.62e-20,58;CL:0000187,9.16e-19,55;CL:0000192,1.16e-15,43;CL:0000514,1.16e-15,43;CL:0000393,2.42e-14,61;CL:0000211,2.42e-14,61;CL:0002320,2.78e-13,361;CL:0000359,1.51e-12,32;CL:0000222,2.88e-12,121;CL:0000134,5.62e-12,354;CL:0000219,3.42e-09,386;CL:0002494,1.67e-08,16;CL:0000860,9.93e-08,42;CL:0002057,9.93e-08,42;CL:0002334,1.03e-07,12;CL:0002620,1.72e-07,23;CL:0000473,2.65e-07,48;CL:0000234,2.65e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000514;1.11e-11;43!CL:0000355;1.26e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!8.50e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.48e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.50e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.43e-21!167;UBERON:0000926!2.29e-19!448;UBERON:0004120!2.29e-19!448;UBERON:0006603!2.29e-19!448;UBERON:0004290!1.54e-18!70;UBERON:0000914!1.64e-18!83;UBERON:0002329!1.64e-18!83;UBERON:0003077!1.64e-18!83;UBERON:0003059!1.64e-18!83;UBERON:0007282!1.64e-18!83;UBERON:0009618!1.64e-18!83;UBERON:0007285!1.64e-18!83;UBERON:0001134!1.98e-17!61;UBERON:0002036!1.98e-17!61;UBERON:0003082!1.98e-17!61;UBERON:0002385!2.24e-16!63;UBERON:0001015!2.24e-16!63;UBERON:0000383!2.24e-16!63;UBERON:0000486!2.98e-15!82;UBERON:0005256!1.56e-14!143;UBERON:0003081!1.59e-14!216;UBERON:0004872!4.79e-14!84;UBERON:0002384!3.00e-13!375;UBERON:0001009!1.33e-12!113;UBERON:0004535!1.58e-12!110;UBERON:0003914!8.38e-12!118;UBERON:0001637!1.89e-11!42;UBERON:0003509!1.89e-11!42;UBERON:0004572!1.89e-11!42;UBERON:0002049!4.47e-11!79;UBERON:0007798!4.47e-11!79;UBERON:0002100!2.01e-10!216;UBERON:0004573!2.79e-10!33;UBERON:0004571!2.79e-10!33;UBERON:0001981!6.96e-10!60;UBERON:0007500!6.96e-10!60;UBERON:0004537!6.96e-10!60;UBERON:0006965!6.96e-10!60;UBERON:0000490!2.41e-09!138;UBERON:0000468!4.13e-09!659;UBERON:0000055!4.77e-09!69;UBERON:0000948!1.15e-08!24;UBERON:0005498!1.15e-08!24;UBERON:0004140!1.15e-08!24;UBERON:0009881!1.15e-08!24;UBERON:0004141!1.15e-08!24;UBERON:0003084!1.15e-08!24;UBERON:0007005!1.15e-08!24;UBERON:0004139!1.15e-08!24;UBERON:0004291!1.15e-08!24;UBERON:0007100!2.12e-08!27;UBERON:0000467!8.65e-08!625;UBERON:0000480!9.41e-08!626;UBERON:0001013!9.47e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.14e-09;33!UBERON:0004571;3.14e-09;33!UBERON:0001637;4.50e-08;42!UBERON:0003509;4.50e-08;42!UBERON:0004572;4.50e-08;42!UBERON:0001013;9.47e-08;14!UBERON:0000948;1.01e-07;22!UBERON:0007100;1.75e-07;25 | |||
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| ||
|short_description=p1@TIMP1 | |||
}} | }} |
Latest revision as of 06:32, 25 September 2015
Short description: | p1@TIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMP1_5end |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | -2bp_to_ENST00000377017_5end |
EntrezGene: | TIMP1 |
HGNC: | 11820 |
UniProt: | Q5H9A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.96e-26 | 427 |
somatic stem cell | 7.72e-25 | 433 |
stem cell | 1.43e-22 | 441 |
fibroblast | 4.40e-20 | 76 |
muscle precursor cell | 7.62e-20 | 58 |
myoblast | 7.62e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.62e-20 | 58 |
muscle cell | 9.16e-19 | 55 |
smooth muscle cell | 1.16e-15 | 43 |
smooth muscle myoblast | 1.16e-15 | 43 |
electrically responsive cell | 2.42e-14 | 61 |
electrically active cell | 2.42e-14 | 61 |
connective tissue cell | 2.78e-13 | 361 |
vascular associated smooth muscle cell | 1.51e-12 | 32 |
mesodermal cell | 2.88e-12 | 121 |
mesenchymal cell | 5.62e-12 | 354 |
motile cell | 3.42e-09 | 386 |
cardiocyte | 1.67e-08 | 16 |
classical monocyte | 9.93e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-08 | 42 |
preadipocyte | 1.03e-07 | 12 |
skin fibroblast | 1.72e-07 | 23 |
defensive cell | 2.65e-07 | 48 |
phagocyte | 2.65e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.50e-08 | 14 |