FFCP PHASE1:Hg19::chr17:4643243..4643254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |UniProt=Q9H2A7 | ||
|association_with_transcript=-20bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |association_with_transcript=-20bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | ||
|cluster_id=chr17:4643243..4643254,- | |||
|description=CAGE_peak_8_at_CXCL16_5end | |description=CAGE_peak_8_at_CXCL16_5end | ||
|id=chr17:4643243..4643254,- | |id=chr17:4643243..4643254,- | ||
|ontology_enrichment_celltype=CL:0000766!4.72e-12!76;CL:0000066!1.70e-11!254;CL:0002057!3.79e-11!42;CL:0000557!5.93e-11!71;CL:0000860!1.21e-10!45;CL:0002009!9.63e-10!65;CL:0000839!1.20e-09!70;CL:0002194!7.12e-09!63;CL:0000576!7.12e-09!63;CL:0000040!7.12e-09!63;CL:0000559!7.12e-09!63 | |ontology_enrichment_celltype=CL:0000766!4.72e-12!76;CL:0000066!1.70e-11!254;CL:0002057!3.79e-11!42;CL:0000557!5.93e-11!71;CL:0000860!1.21e-10!45;CL:0002009!9.63e-10!65;CL:0000839!1.20e-09!70;CL:0002194!7.12e-09!63;CL:0000576!7.12e-09!63;CL:0000040!7.12e-09!63;CL:0000559!7.12e-09!63 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.46e-11;5!CL:0000766;1.06e-09;69!CL:0000097;1.01e-08;5!CL:0000775;2.71e-08;3!CL:0002619;9.55e-08;3!CL:0000473;1.81e-07;39!CL:0000234;1.81e-07;39!CL:0000163;8.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.01e-18,72;CL:0000557,5.38e-17,67;CL:0000763,3.83e-15,108;CL:0000049,3.83e-15,108;CL:0000839,1.64e-14,66;CL:0002009,8.99e-13,61;CL:0000453,1.14e-11,5;CL:0002194,7.94e-11,59;CL:0000576,7.94e-11,59;CL:0000040,7.94e-11,59;CL:0000559,7.94e-11,59;CL:0000473,2.28e-10,48;CL:0000234,2.28e-10,48;CL:0000738,3.32e-10,136;CL:0000097,9.23e-09,5;CL:0002028,9.23e-09,5;CL:0000775,2.51e-08,3;CL:0002619,1.31e-07,3;CL:0002032,2.40e-07,161;CL:0000837,2.40e-07,161;CL:0002076,4.71e-07,42;CL:0000860,5.56e-07,42;CL:0002057,5.56e-07,42;CL:0000163,9.37e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!8.46e-13!511;UBERON:0000480!6.05e-11!626;UBERON:0000467!7.16e-11!625;UBERON:0000922!2.76e-10!612;UBERON:0000923!8.68e-10!604;UBERON:0005291!8.68e-10!604;UBERON:0006598!8.68e-10!604;UBERON:0002532!8.68e-10!604;UBERON:0000468!1.11e-09!659;UBERON:0002050!1.26e-09!605;UBERON:0005423!1.26e-09!605;UBERON:0007023!7.81e-09!115;UBERON:0002371!5.22e-08!80;UBERON:0001474!6.03e-08!86;UBERON:0002193!2.47e-07!112;UBERON:0002390!2.79e-07!102;UBERON:0003061!2.79e-07!102;UBERON:0005177!4.20e-07!107;UBERON:0004119!5.61e-07!169;UBERON:0000925!5.61e-07!169;UBERON:0006595!5.61e-07!169;UBERON:0004765!6.46e-07!101;UBERON:0001434!6.46e-07!101;UBERON:0000926!7.58e-07!448;UBERON:0004120!7.58e-07!448;UBERON:0006603!7.58e-07!448;UBERON:0001007!8.04e-07!155;UBERON:0001555!8.04e-07!155;UBERON:0007026!8.04e-07!155;UBERON:0002405!9.83e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-14,76;UBERON:0001474,8.11e-14,82;UBERON:0004765,6.07e-12,90;UBERON:0001434,4.61e-11,100;UBERON:0002390,2.39e-10,98;UBERON:0003061,2.39e-10,98;UBERON:0002405,2.76e-10,93;UBERON:0002193,9.39e-09,108 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,4.88460817580699,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.619264493264304,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,2.01523926815932,2.59114932815184,1.28787783817093,2.4717700592526,1.13362783106643,0.727752183563449,0.929716147622738,0,0.309706370895104,2.3015391385772,0.768482119587302,0.236482229888585,1.37898272294647,0.645484683583826,0,1.88242339542605,0.272906150057846,0.449446968890169,2.14258724659632,0.962787081228281,0,1.31940520074686,1.19678194572979,0.852449501065388,0.870627715885752,1.13477044938228,0.622822248995575,1.00499466102697,1.5644487552606,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,1.4882300997553,0.628975936525128,0,0.300353785683013,0.32145117339416,3.13514018115373,1.59133341759272,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0,0.493313713811028,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,1.00267582127178,1.44846518960824,0,0,0.0945348171640679,0,0.175669571386252,2.42311289670768,1.82147644146271,0.370784442784429,0,0,0.398873881556595,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,0.825354125820202,0,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0,1.62028389576352,0.446498641420399,0,0.337834441449967,0,0,0.183201743930407,3.9534125230819,0,2.61656431285521,0.496971951695318,0,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,2.37600571456411,0,0,0,0,0,0,0.438977620880838,0.30648779579902,2.55404700141215,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.508681776931463,0.57978255948989,0.818238361772504,1.72082757233402,0.365921118388786,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.404493924480493,0.392442930250692,0.38474715694639,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0.548751427043128,2.24803506515239,1.10581869652794,0.277765335475589,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,1.23108503043699,4.44608103764552,2.97262324577457,0,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0,2.81754988842323,6.42717158176393,5.47655822984453,6.69084897159814,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,1.09970290300263,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,3.31532410748828,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0.483437798366489,1.40354529212299,2.11786274552562,0.34444334449382,0,0.524497659837696,1.35359883872224,1.69433741629712,0.784349769176855,0,0.844413031143006,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,1.52925763827023,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.656029291399411,0.325378394664303,1.03041011647722,0.0915694648183434,0.165018999841176,1.14853107599234,0,0,0,0.308097234229289,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0,1.2138933702666,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0.384888450902048,0.670302275535787,1.08890984861323,1.22386941009813,1.29151611801369,0,0.886860307073351,0.689170200620878,1.52234282769651,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0.427296284509893,0,2.69544237579135,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.73254089635947,1.57768678274367,0,1.13654458722565,0.95497793895076,0.593929361665277,0.307160702099232,0,0.984685914873589,0,0,0.63337622438398,0.796991953004279,0,0.503865495708552,0.511343412510774,0,0.311039587661807,0.718946809178615,0.716084698702437,0,0.887790650732402,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0.699679999969566,0,1.593108275997,0,0.472775363535873,0,0,0,0,0.60298219312704,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0.697118721393016,0.615602068030377,0.6836523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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,4.88460817580699,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.619264493264304,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,2.01523926815932,2.59114932815184,1.28787783817093,2.4717700592526,1.13362783106643,0.727752183563449,0.929716147622738,0,0.309706370895104,2.3015391385772,0.768482119587302,0.236482229888585,1.37898272294647,0.645484683583826,0,1.88242339542605,0.272906150057846,0.449446968890169,2.14258724659632,0.962787081228281,0,1.31940520074686,1.19678194572979,0.852449501065388,0.870627715885752,1.13477044938228,0.622822248995575,1.00499466102697,1.5644487552606,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,1.4882300997553,0.628975936525128,0,0.300353785683013,0.32145117339416,3.13514018115373,1.59133341759272,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0,0.493313713811028,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,1.00267582127178,1.44846518960824,0,0,0.0945348171640679,0,0.175669571386252,2.42311289670768,1.82147644146271,0.370784442784429,0,0,0.398873881556595,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,0.825354125820202,0,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0,1.62028389576352,0.446498641420399,0,0.337834441449967,0,0,0.183201743930407,3.9534125230819,0,2.61656431285521,0.496971951695318,0,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,2.37600571456411,0,0,0,0,0,0,0.438977620880838,0.30648779579902,2.55404700141215,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.508681776931463,0.57978255948989,0.818238361772504,1.72082757233402,0.365921118388786,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.404493924480493,0.392442930250692,0.38474715694639,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0.548751427043128,2.24803506515239,1.10581869652794,0.277765335475589,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,1.23108503043699,4.44608103764552,2.97262324577457,0,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0,2.81754988842323,6.42717158176393,5.47655822984453,6.69084897159814,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,1.09970290300263,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,3.31532410748828,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0.483437798366489,1.40354529212299,2.11786274552562,0.34444334449382,0,0.524497659837696,1.35359883872224,1.69433741629712,0.784349769176855,0,0.844413031143006,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,1.52925763827023,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.656029291399411,0.325378394664303,1.03041011647722,0.0915694648183434,0.165018999841176,1.14853107599234,0,0,0,0.308097234229289,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0,1.2138933702666,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0.384888450902048,0.670302275535787,1.08890984861323,1.22386941009813,1.29151611801369,0,0.886860307073351,0.689170200620878,1.52234282769651,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0.427296284509893,0,2.69544237579135,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.73254089635947,1.57768678274367,0,1.13654458722565,0.95497793895076,0.593929361665277,0.307160702099232,0,0.984685914873589,0,0,0.63337622438398,0.796991953004279,0,0.503865495708552,0.511343412510774,0,0.311039587661807,0.718946809178615,0.716084698702437,0,0.887790650732402,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0.699679999969566,0,1.593108275997,0,0.472775363535873,0,0,0,0,0.60298219312704,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0.697118721393016,0.615602068030377,0.6836523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| ||
|short_description=p8@CXCL16 | |short_description=p8@CXCL16 | ||
}} | }} |
Latest revision as of 06:25, 25 September 2015
Short description: | p8@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CXCL16_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.01e-18 | 72 |
granulocyte monocyte progenitor cell | 5.38e-17 | 67 |
myeloid cell | 3.83e-15 | 108 |
common myeloid progenitor | 3.83e-15 | 108 |
myeloid lineage restricted progenitor cell | 1.64e-14 | 66 |
macrophage dendritic cell progenitor | 8.99e-13 | 61 |
Langerhans cell | 1.14e-11 | 5 |
monopoietic cell | 7.94e-11 | 59 |
monocyte | 7.94e-11 | 59 |
monoblast | 7.94e-11 | 59 |
promonocyte | 7.94e-11 | 59 |
defensive cell | 2.28e-10 | 48 |
phagocyte | 2.28e-10 | 48 |
leukocyte | 3.32e-10 | 136 |
mast cell | 9.23e-09 | 5 |
basophil mast progenitor cell | 9.23e-09 | 5 |
neutrophil | 2.51e-08 | 3 |
adult endothelial progenitor cell | 1.31e-07 | 3 |
hematopoietic oligopotent progenitor cell | 2.40e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-07 | 161 |
endo-epithelial cell | 4.71e-07 | 42 |
classical monocyte | 5.56e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-07 | 42 |
endocrine cell | 9.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.91e-14 | 76 |
bone element | 8.11e-14 | 82 |
skeletal element | 6.07e-12 | 90 |
skeletal system | 4.61e-11 | 100 |
hematopoietic system | 2.39e-10 | 98 |
blood island | 2.39e-10 | 98 |
immune system | 2.76e-10 | 93 |
hemolymphoid system | 9.39e-09 | 108 |