FFCP PHASE1:Hg19::chr2:231134598..231134640,+: Difference between revisions
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|id=chr2:231134598..231134640,+
|short_description=p6@SP140
|description=CAGE_peak_6_at_SP140_5end
|association_with_transcript=0bp_to_ENST00000476126_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11262 | |EntrezGene=11262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17133 | |HGNC=17133 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476126_5end | |||
|cluster_id=chr2:231134598..231134640,+ | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_6_at_SP140_5end | |||
|id=chr2:231134598..231134640,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.46e-36!53;CL:0000051!5.46e-36!53;CL:0000838!2.65e-33!52;CL:0000945!1.05e-30!24;CL:0000826!1.05e-30!24;CL:0002087!1.07e-18!119;CL:0000738!2.70e-16!140;CL:0002031!1.14e-14!124;CL:0000988!1.82e-14!182;CL:0000037!4.71e-12!172;CL:0000566!4.71e-12!172;CL:0002032!1.02e-11!165;CL:0000837!1.02e-11!165;CL:0000080!2.19e-11!6;CL:0000236!1.95e-10!14;CL:0000893!5.10e-09!2;CL:0002489!5.10e-09!2;CL:0000809!5.10e-09!2;CL:0000808!5.10e-09!2;CL:0000894!5.10e-09!2;CL:0000806!5.10e-09!2;CL:0000807!5.10e-09!2;CL:0000805!5.10e-09!2;CL:0002425!5.10e-09!2;CL:0000624!9.46e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.20e-12;24!CL:0002092;6.34e-08;10!CL:0000542;9.23e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24;CL:0002092,6.56e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000051;9.23e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.56e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.34e-66;1!DOID:0070004;3.34e-66;1!DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.66e-66,1;DOID:0070004,4.66e-66,1;DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.21e-09!4;UBERON:0005058!2.21e-09!4;UBERON:0009113!2.21e-09!4;UBERON:0003295!2.21e-09!4;UBERON:0005562!2.21e-09!4;UBERON:0004177!3.83e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@SP140 | |||
}} | }} |
Latest revision as of 06:23, 25 September 2015
Short description: | p6@SP140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SP140_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | 0bp_to_ENST00000476126_5end |
EntrezGene: | SP140 |
HGNC: | 17133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
bone marrow cell | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.66e-66 | 1 |
myeloma | 4.66e-66 | 1 |
lymphoma | 5.73e-08 | 10 |