FFCP PHASE1:Hg19::chr19:11689732..11689743,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11689732..11689743,-
|short_description=p7@ACP5
|description=CAGE_peak_7_at_ACP5_5end
|association_with_transcript=57bp_to_ENST00000218758,ENST00000412435...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54 | |EntrezGene=54 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=124 | |HGNC=124 | ||
|TSSclassifier=strong | |||
|UniProt=P13686 | |UniProt=P13686 | ||
|association_with_transcript=57bp_to_ENST00000218758,ENST00000412435,NM_001111035,NM_001111036,uc002msi.3,uc002msj.3,uc010dye.1_5end | |||
|cluster_id=chr19:11689732..11689743,- | |||
|coexpression_cluster_id=C847 | |||
|description=CAGE_peak_7_at_ACP5_5end | |||
|id=chr19:11689732..11689743,- | |||
|ontology_enrichment_celltype=CL:0002194!2.63e-41!63;CL:0000576!2.63e-41!63;CL:0000040!2.63e-41!63;CL:0000559!2.63e-41!63;CL:0002009!1.77e-39!65;CL:0000839!7.65e-39!70;CL:0000766!1.72e-35!76;CL:0000557!1.26e-34!71;CL:0002057!3.31e-34!42;CL:0000860!5.23e-31!45;CL:0002087!1.60e-30!119;CL:0000738!6.64e-29!140;CL:0002031!1.36e-27!124;CL:0000763!2.07e-21!112;CL:0000049!2.07e-21!112;CL:0000037!5.71e-21!172;CL:0000566!5.71e-21!172;CL:0002032!2.55e-19!165;CL:0000837!2.55e-19!165;CL:0000988!1.44e-18!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.78e-70;39!CL:0000234;1.78e-70;39!CL:0000860;3.50e-66;33!CL:0002057;3.50e-66;33!CL:0000576;2.12e-39;48!CL:0000766;3.07e-27;69!CL:0000235;3.52e-22;6!CL:0000763;4.67e-14;100!CL:0002087;1.28e-12;104!CL:0000738;1.47e-12;136!CL:0002619;9.37e-12;3!CL:0000236;1.34e-08;13!CL:0000988;8.51e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.34e-82,59;CL:0000576,8.34e-82,59;CL:0000040,8.34e-82,59;CL:0000559,8.34e-82,59;CL:0002009,7.54e-79,61;CL:0000473,9.02e-73,48;CL:0000234,9.02e-73,48;CL:0000839,3.13e-72,66;CL:0000557,5.04e-71,67;CL:0000766,1.74e-65,72;CL:0000860,2.98e-54,42;CL:0002057,2.98e-54,42;CL:0002087,7.79e-52,115;CL:0002031,2.99e-49,120;CL:0000738,1.93e-44,136;CL:0000763,1.29e-40,108;CL:0000049,1.29e-40,108;CL:0002032,4.47e-34,161;CL:0000837,4.47e-34,161;CL:0000037,5.65e-34,168;CL:0000988,1.04e-31,177;CL:0000235,3.23e-22,6;CL:0002619,1.12e-11,3;CL:0000134,2.76e-11,354;CL:0002320,7.36e-11,361;CL:0000219,2.31e-09,386;CL:0000236,4.63e-08,14;CL:0000048,1.51e-07,427;CL:0000723,2.69e-07,433;CL:0000034,5.63e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.60e-41;42!CL:0000049;1.63e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.60e-30!102;UBERON:0003061!3.60e-30!102;UBERON:0002371!9.55e-29!80;UBERON:0002193!4.95e-28!112;UBERON:0001474!1.56e-25!86;UBERON:0002405!2.52e-23!115;UBERON:0004765!2.98e-19!101;UBERON:0001434!2.98e-19!101;UBERON:0003081!1.24e-10!216;UBERON:0002204!2.76e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-61,76;UBERON:0001474,2.06e-56,82;UBERON:0004765,1.37e-50,90;UBERON:0002405,1.16e-48,93;UBERON:0002390,2.22e-48,98;UBERON:0003061,2.22e-48,98;UBERON:0001434,1.31e-44,100;UBERON:0002193,5.01e-43,108;UBERON:0002204,6.22e-23,167;UBERON:0003081,1.50e-19,203;UBERON:0002384,5.11e-11,371;UBERON:0000926,6.96e-10,315;UBERON:0004120,6.96e-10,315;UBERON:0006603,6.96e-10,315 | |||
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| ||
|short_description=p7@ACP5 | |||
}} | }} |
Latest revision as of 06:21, 25 September 2015
Short description: | p7@ACP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACP5_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 57bp_to_ENST00000218758, ENST00000412435, NM_001111035, NM_001111036, uc002msi.3, uc002msj.3, uc010dye.1_5end |
EntrezGene: | ACP5 |
HGNC: | 124 |
UniProt: | P13686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.34e-82 | 59 |
monocyte | 8.34e-82 | 59 |
monoblast | 8.34e-82 | 59 |
promonocyte | 8.34e-82 | 59 |
macrophage dendritic cell progenitor | 7.54e-79 | 61 |
defensive cell | 9.02e-73 | 48 |
phagocyte | 9.02e-73 | 48 |
myeloid lineage restricted progenitor cell | 3.13e-72 | 66 |
granulocyte monocyte progenitor cell | 5.04e-71 | 67 |
myeloid leukocyte | 1.74e-65 | 72 |
classical monocyte | 2.98e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-54 | 42 |
nongranular leukocyte | 7.79e-52 | 115 |
hematopoietic lineage restricted progenitor cell | 2.99e-49 | 120 |
leukocyte | 1.93e-44 | 136 |
myeloid cell | 1.29e-40 | 108 |
common myeloid progenitor | 1.29e-40 | 108 |
hematopoietic oligopotent progenitor cell | 4.47e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-34 | 161 |
hematopoietic stem cell | 5.65e-34 | 168 |
hematopoietic cell | 1.04e-31 | 177 |
macrophage | 3.23e-22 | 6 |
adult endothelial progenitor cell | 1.12e-11 | 3 |
mesenchymal cell | 2.76e-11 | 354 |
connective tissue cell | 7.36e-11 | 361 |
motile cell | 2.31e-09 | 386 |
B cell | 4.63e-08 | 14 |
multi fate stem cell | 1.51e-07 | 427 |
somatic stem cell | 2.69e-07 | 433 |
stem cell | 5.63e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-61 | 76 |
bone element | 2.06e-56 | 82 |
skeletal element | 1.37e-50 | 90 |
immune system | 1.16e-48 | 93 |
hematopoietic system | 2.22e-48 | 98 |
blood island | 2.22e-48 | 98 |
skeletal system | 1.31e-44 | 100 |
hemolymphoid system | 5.01e-43 | 108 |
musculoskeletal system | 6.22e-23 | 167 |
lateral plate mesoderm | 1.50e-19 | 203 |
connective tissue | 5.11e-11 | 371 |
mesoderm | 6.96e-10 | 315 |
mesoderm-derived structure | 6.96e-10 | 315 |
presumptive mesoderm | 6.96e-10 | 315 |