FFCP PHASE1:Hg19::chr11:9685775..9685791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23075 | |EntrezGene=23075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17070 | |HGNC=17070 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000524817_5end | |association_with_transcript=93bp_to_ENST00000524817_5end | ||
|cluster_id=chr11:9685775..9685791,+ | |||
|coexpression_cluster_id=C1651 | |coexpression_cluster_id=C1651 | ||
|description=CAGE_peak_3_at_SWAP70_5end | |description=CAGE_peak_3_at_SWAP70_5end | ||
|id=chr11:9685775..9685791,+ | |id=chr11:9685775..9685791,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.80e-11!180;CL:0000945!8.71e-11!24;CL:0000826!8.71e-11!24;CL:0000236!6.37e-09!14;CL:0000048!2.03e-07!430;CL:0000034!2.10e-07!444;CL:0000723!3.85e-07!436;CL:0000057!9.62e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.80e-11!180;CL:0000945!8.71e-11!24;CL:0000826!8.71e-11!24;CL:0000236!6.37e-09!14;CL:0000048!2.03e-07!430;CL:0000034!2.10e-07!444;CL:0000723!3.85e-07!436;CL:0000057!9.62e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.02e-22;13!CL:0000945;4.82e-22;24!CL:0000453;1.10e-07;5!CL:0000542;7.92e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.38e-22,24;CL:0000826,6.38e-22,24;CL:0000236,7.77e-21,14;CL:0000048,3.69e-09,427;CL:0000723,9.12e-09,433;CL:0000542,2.80e-08,53;CL:0000051,2.80e-08,53;CL:0000034,2.91e-08,441;CL:0000453,1.11e-07,5;CL:0000838,1.79e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000051;7.92e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.18e-09!42;UBERON:0003509!8.18e-09!42;UBERON:0004572!8.18e-09!42;UBERON:0004535!4.36e-08!110;UBERON:0002049!6.58e-08!79;UBERON:0007798!6.58e-08!79;UBERON:0001009!8.45e-08!113;UBERON:0000055!1.83e-07!69 | |ontology_enrichment_uberon=UBERON:0001637!8.18e-09!42;UBERON:0003509!8.18e-09!42;UBERON:0004572!8.18e-09!42;UBERON:0004535!4.36e-08!110;UBERON:0002049!6.58e-08!79;UBERON:0007798!6.58e-08!79;UBERON:0001009!8.45e-08!113;UBERON:0000055!1.83e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.62e-07;42!UBERON:0003509;3.62e-07;42!UBERON:0004572;3.62e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.55e-08,42;UBERON:0003509,1.55e-08,42;UBERON:0004572,1.55e-08,42;UBERON:0000055,2.32e-07,68;UBERON:0007500,2.36e-07,59;UBERON:0001981,2.36e-07,59;UBERON:0004537,2.36e-07,59;UBERON:0006965,2.36e-07,59 | |||
|phase1_expression=2.72517568905835,1.71280419112787,1.40954404095971,5.00366491765652,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.618831764800233,0,0.672325146451775,2.41077811209591,2.92124036154949,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0.273748850145768,0.251085279189606,0.458480434487708,0.656804715599566,0.787107813136792,0.786728553697808,0,0.619264493264304,0,0,0,2.55641761914995,7.53496932183334,0.587200878669695,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0,0.236482229888585,0.344745680736619,1.93645405075148,0,0.564727018627814,1.09162460023138,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.329851300186716,0,0,0,0,1.24564449799115,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0.285012743741249,0,0,8.79981222306614,4.36910889009705,10.6741110463627,6.40095333849761,5.60554381850417,4.59801951963587,3.30522436392431,5.72432252721218,3.98449078376614,7.6340834618222,5.3518251937532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.255725123687061,1.80719576192283,0.50133791063589,0.289693037921647,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.39752481473341,0,0.347140501607594,1.69592382577203,0.419499436209906,1.6507082516404,1.25396979922086,0.516833518338658,1.77883131343355,0.66944122552934,2.41697590265488,0,0.488124115096339,2.57364156242108,1.62028389576352,1.51809538082936,0.673588117878509,1.0135033243499,0,0,0.366403487860815,0,0,0,0,1.39293562831038,1.85372853138506,0.860509862246441,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0,0.206651562351531,3.56400857184616,0.741800787835671,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0.877955241761676,0.612975591598039,0.600952235626387,0.567160915800105,0.89694817844431,2.98980344345994,1.69545520927649,0.600182192168805,1.75189299705346,1.54584324027377,2.23340227597908,0.337552664482532,0.68205903612839,1.26216887122057,3.12969655383818,2.90962902273861,1.06502877754984,0.906768884048762,0.508681776931463,0.193260853163297,0,0.286804595389004,0.487894824518382,0.265059536642971,0.69716365721711,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,3.25057549622385,1.44375896333917,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,1.15424147083917,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0,0,0,0,0,0,0,1.44366447761074,0.925971025153221,0.951270761172991,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,1.17587489739202,0,0.358234090811393,0,0,1.47798971368783,1.84901711427775,0.207328115540772,0.288239906833923,0,0.317489471460845,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.66004457238855,0.517086863031111,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,1.15825045334063,0.205476322550383,0.895304816199478,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0.24538298343828,0,0,1.03985430765404,1.07057393278297,1.10391690523754,0.234282829985426,0.601892199455438,2.27407504055985,2.0694614258501,0,0.368738337083406,1.65078867489357,0,0.343143423810856,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,2.23297027036899,0.920771839728375,1.12264037773229,1.15325234330131,3.07024349440022,0.965123526861645,1.48418066444991,0,0,0.164254312027618,0,0.581051892299796,0.362578348774867,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.751941714077915,0.145016693914229,0,0.534192213880424,0.165284915360978,0,0,0,0,0.62962469366128,2.0911118104818,0.924100740528266,1.59691809095107,0,0.9266210955196,0.572499546967965,0.744316738719335,0.949138274156178,0,0,0,0,0,0.359744915166629,0,0.353437207037059,1.01091240786658,1.58510321173008,0,0,1.21856744815642,0,0.9554993798559,0.424216295861138,1.13008116620243,0,0.66343897524122,0.876901770507525,1.15755106853338,1.31178950409327,0.405820753925408,2.16876448669825,1.97186921772569,0,0.196498082026242,0.35667105148125,0,0.633322905892992,1.97576935775941,0,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,1.42939065274673,2.05681136543097,0,0.540031437238115,0.79312517629427,1.49553699578462,0,0.245040215981032,2.04383492638291,0,0,0,0.199579371432817,1.53204296105893,0.211673582723883,0.324621940274555,0,0,0,0,1.69291777801603,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| ||
|short_description=p3@SWAP70 | |short_description=p3@SWAP70 | ||
}} | }} |
Latest revision as of 06:20, 25 September 2015
Short description: | p3@SWAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SWAP70_5end |
Coexpression cluster: | C1651_migratory_Burkitt_lymphoma_CD19_immature_epithelioid_Adipocyte |
Association with transcript: | 93bp_to_ENST00000524817_5end |
EntrezGene: | SWAP70 |
HGNC: | 17070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.38e-22 | 24 |
pro-B cell | 6.38e-22 | 24 |
B cell | 7.77e-21 | 14 |
multi fate stem cell | 3.69e-09 | 427 |
somatic stem cell | 9.12e-09 | 433 |
lymphocyte | 2.80e-08 | 53 |
common lymphoid progenitor | 2.80e-08 | 53 |
stem cell | 2.91e-08 | 441 |
Langerhans cell | 1.11e-07 | 5 |
lymphoid lineage restricted progenitor cell | 1.79e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
artery | 1.55e-08 | 42 |
arterial blood vessel | 1.55e-08 | 42 |
arterial system | 1.55e-08 | 42 |
vessel | 2.32e-07 | 68 |
epithelial tube open at both ends | 2.36e-07 | 59 |
blood vessel | 2.36e-07 | 59 |
blood vasculature | 2.36e-07 | 59 |
vascular cord | 2.36e-07 | 59 |