FFCP PHASE1:Hg19::chr19:11689703..11689718,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11689703..11689718,-
|short_description=p4@ACP5
|description=CAGE_peak_4_at_ACP5_5end
|association_with_transcript=82bp_to_ENST00000218758,ENST00000412435...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54 | |EntrezGene=54 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=124 | |HGNC=124 | ||
|TSSclassifier=strong | |||
|UniProt=P13686 | |UniProt=P13686 | ||
|association_with_transcript=82bp_to_ENST00000218758,ENST00000412435,NM_001111035,NM_001111036,uc002msi.3,uc002msj.3,uc010dye.1_5end | |||
|cluster_id=chr19:11689703..11689718,- | |||
|coexpression_cluster_id=C847 | |||
|description=CAGE_peak_4_at_ACP5_5end | |||
|id=chr19:11689703..11689718,- | |||
|ontology_enrichment_celltype=CL:0002194!8.71e-43!63;CL:0000576!8.71e-43!63;CL:0000040!8.71e-43!63;CL:0000559!8.71e-43!63;CL:0002009!1.46e-42!65;CL:0000839!5.27e-42!70;CL:0000557!7.47e-39!71;CL:0000766!8.90e-37!76;CL:0002057!7.35e-36!42;CL:0000738!3.46e-34!140;CL:0002087!7.77e-33!119;CL:0000860!1.50e-32!45;CL:0002031!5.27e-31!124;CL:0000763!1.25e-25!112;CL:0000049!1.25e-25!112;CL:0000037!2.33e-25!172;CL:0000566!2.33e-25!172;CL:0002032!5.18e-23!165;CL:0000837!5.18e-23!165;CL:0000988!1.23e-22!182;CL:0000451!4.42e-10!10;CL:0000990!2.90e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.00e-64;39!CL:0000234;1.00e-64;39!CL:0000860;1.08e-61;33!CL:0002057;1.08e-61;33!CL:0000576;1.79e-36;48!CL:0000766;7.21e-24;69!CL:0000235;2.70e-18;6!CL:0000763;5.36e-13;100!CL:0002087;4.58e-10;104!CL:0002619;1.15e-09;3!CL:0000738;2.14e-09;136!CL:0002541;2.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.72e-73,59;CL:0000576,2.72e-73,59;CL:0000040,2.72e-73,59;CL:0000559,2.72e-73,59;CL:0000839,3.80e-71,66;CL:0002009,1.50e-70,61;CL:0000473,9.18e-67,48;CL:0000234,9.18e-67,48;CL:0000557,2.69e-63,67;CL:0000766,3.64e-58,72;CL:0000860,3.33e-51,42;CL:0002057,3.33e-51,42;CL:0000763,3.19e-41,108;CL:0000049,3.19e-41,108;CL:0002031,9.48e-40,120;CL:0002087,5.52e-38,115;CL:0000738,5.35e-32,136;CL:0002032,5.04e-28,161;CL:0000837,5.04e-28,161;CL:0000037,2.39e-26,168;CL:0000988,2.18e-24,177;CL:0000235,2.58e-18,6;CL:0002619,1.13e-09,3;CL:0000134,1.16e-08,354;CL:0002541,2.71e-08,3;CL:0002320,2.90e-08,361;CL:0000219,7.06e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-39;42!CL:0000049;8.96e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-40!102;UBERON:0003061!1.13e-40!102;UBERON:0002193!6.10e-38!112;UBERON:0002371!1.94e-32!80;UBERON:0001474!6.28e-29!86;UBERON:0002405!2.17e-25!115;UBERON:0004765!4.77e-22!101;UBERON:0001434!4.77e-22!101;UBERON:0003081!4.95e-14!216;UBERON:0002204!9.57e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.93e-08;3!UBERON:0000920;2.93e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-54,76;UBERON:0002390,2.36e-53,98;UBERON:0003061,2.36e-53,98;UBERON:0002193,9.16e-52,108;UBERON:0001474,9.25e-50,82;UBERON:0002405,4.08e-47,93;UBERON:0004765,2.27e-44,90;UBERON:0001434,7.71e-39,100;UBERON:0003081,7.69e-22,203;UBERON:0002204,7.03e-19,167;UBERON:0000926,2.06e-10,315;UBERON:0004120,2.06e-10,315;UBERON:0006603,2.06e-10,315;UBERON:0002384,2.62e-08,371;UBERON:0000920,2.71e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.314843125254717,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,15.8979986710346,31.093791937822,12.363627246441,48.8538082299337,83.5105835552269,79.0824039472281,12.0863099190956,29.1929200495496,12.078548464909,9.78154133895312,26.6407134790265,11.8241114944293,3.10271112662957,5.80936215225443,2.70852973188684,25.0362311591664,67.9536313644036,35.7310340267685,12.8555234795779,27.278967301468,21.0981251513684,24.0791449136303,57.8444607102732,26.425934533027,2.03146467040009,6.24123747160254,0.622822248995575,7.5374599577023,9.90817544998383,6.08128765174327,4.23779651843358,10.3117738076518,5.06339819905415,0.211255286311942,0.425208599930087,0.838634582033504,0,0.300353785683013,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,1.98313461835459,0,0.569212969109448,2.93618594685469,3.05818582500183,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.640456598628376,1.69077151827842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.57174890597255,0,0.370784442784429,36.0247606956698,48.233937231897,27.655255787924,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8527856391767,51.7149425957715,38.4954710327806,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8657500628881,25.1128545716063,29.5167515276244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,3.13722541229881,0,0,0,1.03041011647722,0,0,0,1.30012049207304,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0,0,1.29694662238543,1.62009431171434,1.58625035258854,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.269272933229316,0,1.5950057986596,1.4655614944298,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.709251365692784,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56289790162467,0.314408610199332,11.5986935497215,1.9846640872478,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,3.43487327937273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0,0,0.905777061400041,0.308696632431779,2.40415516554353,0,0,0,0,0,0,0,0.375935671919414,0.709036767709349,0.0999411559249289,0,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,1.42784361638774,0,0.18378979906969,0.50141507858475,0.303114792872958,0,0,0,0.426467963801962,0,0.258355639344024,0.434523000071005,0,0,0,0.870866991587845,0.342233301085281,1.14498490124799,0.645499848534087,0,0,0,0,0,0,0,2.03448089157869,0,4.22674966541155,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.314843125254717,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,15.8979986710346,31.093791937822,12.363627246441,48.8538082299337,83.5105835552269,79.0824039472281,12.0863099190956,29.1929200495496,12.078548464909,9.78154133895312,26.6407134790265,11.8241114944293,3.10271112662957,5.80936215225443,2.70852973188684,25.0362311591664,67.9536313644036,35.7310340267685,12.8555234795779,27.278967301468,21.0981251513684,24.0791449136303,57.8444607102732,26.425934533027,2.03146467040009,6.24123747160254,0.622822248995575,7.5374599577023,9.90817544998383,6.08128765174327,4.23779651843358,10.3117738076518,5.06339819905415,0.211255286311942,0.425208599930087,0.838634582033504,0,0.300353785683013,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,1.98313461835459,0,0.569212969109448,2.93618594685469,3.05818582500183,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.640456598628376,1.69077151827842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.57174890597255,0,0.370784442784429,36.0247606956698,48.233937231897,27.655255787924,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8527856391767,51.7149425957715,38.4954710327806,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8657500628881,25.1128545716063,29.5167515276244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,3.13722541229881,0,0,0,1.03041011647722,0,0,0,1.30012049207304,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0,0,1.29694662238543,1.62009431171434,1.58625035258854,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.269272933229316,0,1.5950057986596,1.4655614944298,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.709251365692784,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56289790162467,0.314408610199332,11.5986935497215,1.9846640872478,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,3.43487327937273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0,0,0.905777061400041,0.308696632431779,2.40415516554353,0,0,0,0,0,0,0,0.375935671919414,0.709036767709349,0.0999411559249289,0,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,1.42784361638774,0,0.18378979906969,0.50141507858475,0.303114792872958,0,0,0,0.426467963801962,0,0.258355639344024,0.434523000071005,0,0,0,0.870866991587845,0.342233301085281,1.14498490124799,0.645499848534087,0,0,0,0,0,0,0,2.03448089157869,0,4.22674966541155,0.320568492303233 | ||
|short_description=p4@ACP5 | |||
}} | }} |
Latest revision as of 06:20, 25 September 2015
Short description: | p4@ACP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACP5_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 82bp_to_ENST00000218758, ENST00000412435, NM_001111035, NM_001111036, uc002msi.3, uc002msj.3, uc010dye.1_5end |
EntrezGene: | ACP5 |
HGNC: | 124 |
UniProt: | P13686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.72e-73 | 59 |
monocyte | 2.72e-73 | 59 |
monoblast | 2.72e-73 | 59 |
promonocyte | 2.72e-73 | 59 |
myeloid lineage restricted progenitor cell | 3.80e-71 | 66 |
macrophage dendritic cell progenitor | 1.50e-70 | 61 |
defensive cell | 9.18e-67 | 48 |
phagocyte | 9.18e-67 | 48 |
granulocyte monocyte progenitor cell | 2.69e-63 | 67 |
myeloid leukocyte | 3.64e-58 | 72 |
classical monocyte | 3.33e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-51 | 42 |
myeloid cell | 3.19e-41 | 108 |
common myeloid progenitor | 3.19e-41 | 108 |
hematopoietic lineage restricted progenitor cell | 9.48e-40 | 120 |
nongranular leukocyte | 5.52e-38 | 115 |
leukocyte | 5.35e-32 | 136 |
hematopoietic oligopotent progenitor cell | 5.04e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-28 | 161 |
hematopoietic stem cell | 2.39e-26 | 168 |
hematopoietic cell | 2.18e-24 | 177 |
macrophage | 2.58e-18 | 6 |
adult endothelial progenitor cell | 1.13e-09 | 3 |
mesenchymal cell | 1.16e-08 | 354 |
chorionic membrane mesenchymal stem cell | 2.71e-08 | 3 |
connective tissue cell | 2.90e-08 | 361 |
motile cell | 7.06e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.54e-54 | 76 |
hematopoietic system | 2.36e-53 | 98 |
blood island | 2.36e-53 | 98 |
hemolymphoid system | 9.16e-52 | 108 |
bone element | 9.25e-50 | 82 |
immune system | 4.08e-47 | 93 |
skeletal element | 2.27e-44 | 90 |
skeletal system | 7.71e-39 | 100 |
lateral plate mesoderm | 7.69e-22 | 203 |
musculoskeletal system | 7.03e-19 | 167 |
mesoderm | 2.06e-10 | 315 |
mesoderm-derived structure | 2.06e-10 | 315 |
presumptive mesoderm | 2.06e-10 | 315 |
connective tissue | 2.62e-08 | 371 |
egg chorion | 2.71e-08 | 3 |