FFCP PHASE1:Hg19::chr17:4642690..4642701,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4642690..4642701,- to FFCP PHASE1:Hg19::chr17:4642690..4642701,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB463490,CU676014,HQ448003_5end | |||
|cluster_id=chr17:4642690..4642701,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_9_at_CXCL16_5end | |||
|id=chr17:4642690..4642701,- | |||
|ontology_enrichment_celltype=CL:0000766!1.81e-49!76;CL:0000557!1.68e-42!71;CL:0000839!9.75e-42!70;CL:0002057!1.79e-39!42;CL:0002194!4.19e-39!63;CL:0000576!4.19e-39!63;CL:0000040!4.19e-39!63;CL:0000559!4.19e-39!63;CL:0002009!6.75e-39!65;CL:0000860!1.37e-35!45;CL:0000763!1.31e-29!112;CL:0000049!1.31e-29!112;CL:0000738!3.55e-22!140;CL:0002031!2.11e-16!124;CL:0002087!2.66e-14!119;CL:0002032!1.15e-13!165;CL:0000837!1.15e-13!165;CL:0000037!2.24e-13!172;CL:0000566!2.24e-13!172;CL:0000988!2.19e-11!182;CL:0002393!5.28e-07!9;CL:0002397!5.28e-07!9;CL:0000094!9.45e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.73e-64;39!CL:0000234;5.73e-64;39!CL:0000860;2.21e-63;33!CL:0002057;2.21e-63;33!CL:0000576;1.29e-54;48!CL:0000766;1.40e-52;69!CL:0000763;1.44e-23;100!CL:0000235;7.18e-16;6!CL:0000738;1.43e-14;136!CL:0000094;3.50e-14;8!CL:0002087;3.35e-12;104!CL:0000097;9.72e-12;5!CL:0000081;5.20e-10;11!CL:0002393;2.56e-09;6!CL:0002397;2.56e-09;6!CL:0002619;4.57e-09;3!CL:0000767;1.31e-07;3!CL:0000875;1.72e-07;3!CL:0002396;1.72e-07;3!CL:0000219;2.00e-07;193!CL:0000988;2.61e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.68e-114,72;CL:0000473,4.26e-99,48;CL:0000234,4.26e-99,48;CL:0000839,2.52e-96,66;CL:0000557,1.09e-94,67;CL:0002194,8.06e-89,59;CL:0000576,8.06e-89,59;CL:0000040,8.06e-89,59;CL:0000559,8.06e-89,59;CL:0002009,1.67e-85,61;CL:0000860,4.52e-84,42;CL:0002057,4.52e-84,42;CL:0000763,7.39e-79,108;CL:0000049,7.39e-79,108;CL:0000738,2.22e-59,136;CL:0002032,1.10e-47,161;CL:0000837,1.10e-47,161;CL:0002031,1.02e-46,120;CL:0000037,4.97e-45,168;CL:0000988,6.31e-42,177;CL:0002087,2.84e-39,115;CL:0000134,5.71e-16,354;CL:0000235,7.13e-16,6;CL:0002320,2.42e-15,361;CL:0002393,4.86e-15,9;CL:0002397,4.86e-15,9;CL:0000094,1.79e-14,8;CL:0000219,3.82e-13,386;CL:0000097,6.37e-12,5;CL:0002028,6.37e-12,5;CL:0000048,4.40e-11,427;CL:0000034,8.31e-11,441;CL:0000723,1.05e-10,433;CL:0000081,3.24e-10,11;CL:0002619,4.59e-09,3;CL:0000767,8.06e-08,3;CL:0000875,1.24e-07,3;CL:0002396,1.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-60;42!CL:0000049;3.11e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.82e-36!80;UBERON:0002405!9.84e-34!115;UBERON:0001474!1.96e-33!86;UBERON:0002390!1.88e-30!102;UBERON:0003061!1.88e-30!102;UBERON:0002193!1.95e-29!112;UBERON:0004765!2.94e-29!101;UBERON:0001434!2.94e-29!101;UBERON:0007023!4.25e-14!115;UBERON:0002204!2.25e-12!167;UBERON:0000062!1.11e-11!511;UBERON:0003081!1.80e-11!216;UBERON:0000467!2.29e-09!625;UBERON:0000480!2.88e-09!626;UBERON:0001049!8.01e-09!57;UBERON:0005068!8.01e-09!57;UBERON:0006241!8.01e-09!57;UBERON:0007135!8.01e-09!57;UBERON:0000923!1.95e-08!604;UBERON:0005291!1.95e-08!604;UBERON:0006598!1.95e-08!604;UBERON:0002532!1.95e-08!604;UBERON:0002050!2.41e-08!605;UBERON:0005423!2.41e-08!605;UBERON:0000922!4.92e-08!612;UBERON:0000468!8.28e-08!659;UBERON:0001893!5.06e-07!34;UBERON:0002020!5.13e-07!34;UBERON:0003528!5.13e-07!34;UBERON:0002780!5.94e-07!41;UBERON:0001890!5.94e-07!41;UBERON:0006240!5.94e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.10e-85,76;UBERON:0001474,8.77e-78,82;UBERON:0002405,1.13e-69,93;UBERON:0004765,1.27e-69,90;UBERON:0002390,8.78e-63,98;UBERON:0003061,8.78e-63,98;UBERON:0001434,3.05e-61,100;UBERON:0002193,5.38e-58,108;UBERON:0002204,6.61e-31,167;UBERON:0003081,1.32e-27,203;UBERON:0002384,5.72e-16,371;UBERON:0000926,3.10e-13,315;UBERON:0004120,3.10e-13,315;UBERON:0006603,3.10e-13,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.91914699048606,4.02521920621798,0,0.30120591877825,0,0,0,0,0,2.00544447470142,1.51907609501096,6.94137970143765,15.546895968911,11.07574940827,11.7772573411447,9.06902264853143,3.88134497900506,10.6917356976615,7.40102198439286,7.43295290148249,12.9461576544968,8.96562472851852,4.25668013799453,13.1003358679915,7.74581620300591,2.70852973188684,10.1650863353007,9.5517152520246,5.61808711112712,13.4676912643197,13.4790191371959,5.75403413219137,8.57613380485462,7.38015533200038,7.6720455095885,14.5104619314292,9.07816359505824,4.9825779919646,7.5374599577023,3.65038042894141,4.99534342821768,8.47559303686716,8.47038562771399,4.1140110367315,1.69004229049553,1.06302149982522,1.04829322754188,0.898629049171961,1.20141514273205,0.48217676009124,1.42506371870624,1.59133341759272,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.589405839739707,0.364295288292542,0,0,0.522389211897802,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,1.4763109092493,1.40241773803446,0,0,0,0.982827216677626,1.18157981336281,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,6.15542515218493,9.12616634043027,10.7014436847884,0,0.671928512795438,0.567100388969546,0,0,0.383382679165211,3.4486426652716,2.28925928434388,2.90259361757081,1.44119953416961,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.52031382288914,12.6500363689819,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0.637938751653163,2.24702107184155,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.426910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.12972560932135,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0.121360521749513,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.493217028184668,0,1.11136990144637,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0.278847488557207,0,0,0,0,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,1.14581926067151,0,0,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0.160317640503067,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.13480708770837,0,0,0.795229689809303,0.544813624446302,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0.646414781807753,0.79339561045614,0.171086837884329,0,2.45611048905698,0.157204305099666,2.07119527673598,1.9846640872478,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,1.36402216187572,1.0629187225069,1.14495775979091,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.638535436228605,0.41023272848151,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0,0,0.147856086217045,0.540300676947157,2.34323429584154,0.206686796501184,0.380494861163441,0,0,0,0,0.511049710558381,0,0,0.606965604236632,0,0.177404740325278,0,0,0.339848664884159,0.197318320688547,0,0,0,0.471346769748006,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0.2053256137124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| ||
|short_description=p9@CXCL16 | |||
}} | }} |
Latest revision as of 06:10, 25 September 2015
Short description: | p9@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CXCL16_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_AB463490, CU676014, HQ448003_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.10e-85 | 76 |
bone element | 8.77e-78 | 82 |
immune system | 1.13e-69 | 93 |
skeletal element | 1.27e-69 | 90 |
hematopoietic system | 8.78e-63 | 98 |
blood island | 8.78e-63 | 98 |
skeletal system | 3.05e-61 | 100 |
hemolymphoid system | 5.38e-58 | 108 |
musculoskeletal system | 6.61e-31 | 167 |
lateral plate mesoderm | 1.32e-27 | 203 |
connective tissue | 5.72e-16 | 371 |
mesoderm | 3.10e-13 | 315 |
mesoderm-derived structure | 3.10e-13 | 315 |
presumptive mesoderm | 3.10e-13 | 315 |