FFCP PHASE1:Hg19::chr17:4642647..4642667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |UniProt=Q9H2A7 | ||
|association_with_transcript=-8bp_to_AF337812_5end | |association_with_transcript=-8bp_to_AF337812_5end | ||
|cluster_id=chr17:4642647..4642667,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_5_at_CXCL16_5end | |description=CAGE_peak_5_at_CXCL16_5end | ||
|id=chr17:4642647..4642667,- | |id=chr17:4642647..4642667,- | ||
|ontology_enrichment_celltype=CL:0000766!1.65e-48!76;CL:0000557!1.27e-41!71;CL:0002009!3.02e-39!65;CL:0000839!3.59e-39!70;CL:0002057!1.56e-38!42;CL:0002194!8.85e-38!63;CL:0000576!8.85e-38!63;CL:0000040!8.85e-38!63;CL:0000559!8.85e-38!63;CL:0000860!1.57e-34!45;CL:0000763!8.63e-29!112;CL:0000049!8.63e-29!112;CL:0000738!2.90e-28!140;CL:0002031!1.89e-19!124;CL:0002087!6.12e-18!119;CL:0000037!6.74e-17!172;CL:0000566!6.74e-17!172;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0000988!9.32e-15!182;CL:0002393!1.31e-08!9;CL:0002397!1.31e-08!9;CL:0000094!1.57e-08!8;CL:0000990!3.06e-07!8 | |ontology_enrichment_celltype=CL:0000766!1.65e-48!76;CL:0000557!1.27e-41!71;CL:0002009!3.02e-39!65;CL:0000839!3.59e-39!70;CL:0002057!1.56e-38!42;CL:0002194!8.85e-38!63;CL:0000576!8.85e-38!63;CL:0000040!8.85e-38!63;CL:0000559!8.85e-38!63;CL:0000860!1.57e-34!45;CL:0000763!8.63e-29!112;CL:0000049!8.63e-29!112;CL:0000738!2.90e-28!140;CL:0002031!1.89e-19!124;CL:0002087!6.12e-18!119;CL:0000037!6.74e-17!172;CL:0000566!6.74e-17!172;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0000988!9.32e-15!182;CL:0002393!1.31e-08!9;CL:0002397!1.31e-08!9;CL:0000094!1.57e-08!8;CL:0000990!3.06e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.83e-57;33!CL:0002057;4.83e-57;33!CL:0000473;4.53e-56;39!CL:0000234;4.53e-56;39!CL:0000576;6.07e-49;48!CL:0000766;8.47e-44;69!CL:0000763;8.64e-19;100!CL:0000094;7.20e-16;8!CL:0000738;3.26e-15;136!CL:0002087;1.82e-12;104!CL:0000235;1.77e-11;6!CL:0002393;2.72e-11;6!CL:0002397;2.72e-11;6!CL:0000081;4.82e-11;11!CL:0000453;9.55e-09;5!CL:0000990;1.79e-08;8!CL:0000988;1.06e-07;177!CL:0000219;2.14e-07;193!CL:0000775;7.38e-07;3!CL:0000451;9.70e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-102,72;CL:0000557,1.09e-88,67;CL:0000473,1.75e-88,48;CL:0000234,1.75e-88,48;CL:0002009,3.88e-86,61;CL:0000839,4.79e-84,66;CL:0002194,4.57e-83,59;CL:0000576,4.57e-83,59;CL:0000040,4.57e-83,59;CL:0000559,4.57e-83,59;CL:0000860,6.04e-78,42;CL:0002057,6.04e-78,42;CL:0000763,3.13e-73,108;CL:0000049,3.13e-73,108;CL:0000738,3.00e-63,136;CL:0000037,4.02e-47,168;CL:0002032,2.99e-45,161;CL:0000837,2.99e-45,161;CL:0002031,6.89e-45,120;CL:0000988,1.22e-43,177;CL:0002087,9.28e-43,115;CL:0002393,4.88e-16,9;CL:0002397,4.88e-16,9;CL:0000094,7.10e-16,8;CL:0000134,2.17e-13,354;CL:0002320,9.60e-13,361;CL:0000235,1.83e-11,6;CL:0000081,4.77e-11,11;CL:0000219,1.71e-10,386;CL:0000453,8.55e-09,5;CL:0000990,1.83e-08,8;CL:0000034,2.61e-08,441;CL:0000048,2.85e-08,427;CL:0000723,6.71e-08,433;CL:0000775,7.46e-07,3;CL:0000451,9.87e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-55;42!CL:0000049;1.07e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-37!102;UBERON:0003061!1.70e-37!102;UBERON:0002371!9.66e-34!80;UBERON:0002193!2.65e-33!112;UBERON:0001474!1.83e-29!86;UBERON:0002405!4.84e-26!115;UBERON:0004765!5.92e-25!101;UBERON:0001434!5.92e-25!101;UBERON:0007023!1.73e-19!115;UBERON:0003081!6.15e-14!216;UBERON:0000062!4.53e-10!511;UBERON:0002204!3.39e-09!167;UBERON:0000922!1.10e-07!612;UBERON:0000923!2.04e-07!604;UBERON:0005291!2.04e-07!604;UBERON:0006598!2.04e-07!604;UBERON:0002532!2.04e-07!604;UBERON:0000467!2.25e-07!625;UBERON:0002050!2.57e-07!605;UBERON:0005423!2.57e-07!605;UBERON:0000480!2.84e-07!626 | |ontology_enrichment_uberon=UBERON:0002390!1.70e-37!102;UBERON:0003061!1.70e-37!102;UBERON:0002371!9.66e-34!80;UBERON:0002193!2.65e-33!112;UBERON:0001474!1.83e-29!86;UBERON:0002405!4.84e-26!115;UBERON:0004765!5.92e-25!101;UBERON:0001434!5.92e-25!101;UBERON:0007023!1.73e-19!115;UBERON:0003081!6.15e-14!216;UBERON:0000062!4.53e-10!511;UBERON:0002204!3.39e-09!167;UBERON:0000922!1.10e-07!612;UBERON:0000923!2.04e-07!604;UBERON:0005291!2.04e-07!604;UBERON:0006598!2.04e-07!604;UBERON:0002532!2.04e-07!604;UBERON:0000467!2.25e-07!625;UBERON:0002050!2.57e-07!605;UBERON:0005423!2.57e-07!605;UBERON:0000480!2.84e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.77e-77,98;UBERON:0003061,1.77e-77,98;UBERON:0002371,4.08e-76,76;UBERON:0002193,8.78e-71,108;UBERON:0001474,2.96e-69,82;UBERON:0004765,8.18e-66,90;UBERON:0002405,1.18e-65,93;UBERON:0001434,2.06e-57,100;UBERON:0002204,1.92e-29,167;UBERON:0003081,3.16e-29,203;UBERON:0000926,2.79e-13,315;UBERON:0004120,2.79e-13,315;UBERON:0006603,2.79e-13,315;UBERON:0002384,1.81e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0,22.8151280572364,16.8884935162774,42.729250035237,0,0,0,0,0,0,33.2397245119126,14.4392002178502,19.096956622995,12.9870975059156,17.8141516310439,17.2575630314905,67.1739863161589,62.7274066523424,40.7541222795531,88.0906049872545,95.3909500210636,69.9936398222934,86.020025304323,76.5920512522011,40.9114257707252,92.7365881181504,91.6588250689033,52.8163297717933,105.603952483401,94.6984340700725,40.8996741690054,140.798590490615,123.23674639722,65.8517239573012,67.2896652380901,55.251433161192,43.9011493048675,113.471812303776,88.5120950518178,56.0540024096018,83.6658055304955,73.0076085788282,61.8988207409582,82.3343323581382,81.0210799172642,42.7224223045194,7.81644559354185,15.9453224973783,8.38634582033504,6.51506060649672,8.25972910628285,7.87555374815693,14.5356499308037,10.5425838915518,14.2478039936414,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0,1.32171328579026,4.48406850385229,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,2.16115474571226,0.728590576585084,0,1.29818957461873,0.696518949197069,0.930705723632056,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,148.911871702751,112.456276603014,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,11.8184162921951,25.7404691653161,22.443305505598,0,1.17587489739202,1.13420077793909,0,0.290633938513962,0,1.97065295158377,1.76096868026452,2.28060927094849,1.00883967391873,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,15.8110914833548,13.5609414686674,23.1917333431335,0,0,0,0,0,0,0,1.57624608161542,0,0.513372145118994,0,0,0,0,0,44.9404214368309,23.932916736322,42.6847978839116,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,5.37596867919507,8.62856803274467,6.29692591040322,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.966875596732978,0.40101294060657,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,2.06082023295445,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,1.34060455107157,0,2.2594512186427,0.43050537267123,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,1.23408681925858,3.24236655596359,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0.47748896947538,0.890894042497916,0,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0.358042349351218,0,1.28236427328014,4.7896618469388,0,0,1.29875337426592,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0,0.278847488557207,0.153900517007594,0.227884111694002,0,0,0.108647371922008,1.5950057986596,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.424059214301822,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,1.68502832451693,0,0.702793337176017,0,0,0,0.394584402849391,0,0,2.21153028699708,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0.34823682632161,0.52418000472609,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.443175571691151,0.782205530939212,0.0801588202515337,1.06726497369676,0.19980960958213,0.432271251462318,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.399358000997982,0,0.446342914883745,0.201550417460179,0,0,0.236349546921671,0.494495150286999,0.202210631562555,0,0,0,0.272406812223151,0,0,0,6.29926896344201,1.5476039091159,0.121499113316049,0,0.472834243795189,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,1.46552233678082,1.32506888912221,0.387848869084652,0.13223260174269,0,0,6.19366992892629,0,12.0129326050687,7.44249032717926,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.250381861413,1.72022758707021,0.443716206147409,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182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| ||
|short_description=p5@CXCL16 | |short_description=p5@CXCL16 | ||
}} | }} |
Latest revision as of 06:09, 25 September 2015
Short description: | p5@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CXCL16_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -8bp_to_AF337812_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.77e-77 | 98 |
blood island | 1.77e-77 | 98 |
bone marrow | 4.08e-76 | 76 |
hemolymphoid system | 8.78e-71 | 108 |
bone element | 2.96e-69 | 82 |
skeletal element | 8.18e-66 | 90 |
immune system | 1.18e-65 | 93 |
skeletal system | 2.06e-57 | 100 |
musculoskeletal system | 1.92e-29 | 167 |
lateral plate mesoderm | 3.16e-29 | 203 |
mesoderm | 2.79e-13 | 315 |
mesoderm-derived structure | 2.79e-13 | 315 |
presumptive mesoderm | 2.79e-13 | 315 |
connective tissue | 1.81e-12 | 371 |