FFCP PHASE1:Hg19::chr17:4639681..4639690,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_uc002fyq.3_5end | |||
|cluster_id=chr17:4639681..4639690,- | |||
|description=CAGE_peak_12_at_CXCL16_5end | |||
|id=chr17:4639681..4639690,- | |||
|ontology_enrichment_celltype=CL:0000766!2.15e-67!76;CL:0000557!7.44e-61!71;CL:0000839!4.20e-57!70;CL:0000763!9.16e-56!112;CL:0000049!9.16e-56!112;CL:0002009!4.61e-55!65;CL:0002194!1.84e-52!63;CL:0000576!1.84e-52!63;CL:0000040!1.84e-52!63;CL:0000559!1.84e-52!63;CL:0002057!8.33e-50!42;CL:0000860!1.75e-45!45;CL:0000738!4.06e-37!140;CL:0002032!3.92e-31!165;CL:0000837!3.92e-31!165;CL:0000037!4.69e-31!172;CL:0000566!4.69e-31!172;CL:0000988!5.13e-28!182;CL:0002031!1.86e-27!124;CL:0002087!1.02e-22!119;CL:0000990!5.18e-10!8;CL:0000094!9.27e-09!8;CL:0000453!2.33e-08!5;CL:0002274!2.47e-08!5;CL:0000457!2.47e-08!5;CL:0002191!2.47e-08!5;CL:0000097!2.47e-08!5;CL:0000831!2.47e-08!5;CL:0002028!2.47e-08!5;CL:0000451!7.59e-08!10;CL:0002393!9.00e-07!9;CL:0002397!9.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.86e-76;33!CL:0002057;2.86e-76;33!CL:0000473;8.04e-68;39!CL:0000234;8.04e-68;39!CL:0000576;5.74e-53;48!CL:0000766;1.70e-44;69!CL:0000763;2.28e-23;100!CL:0000738;4.28e-17;136!CL:0000453;1.16e-16;5!CL:0000097;4.01e-16;5!CL:0000990;1.18e-12;8!CL:0002087;1.31e-12;104!CL:0002619;1.33e-11;3!CL:0000451;3.14e-10;10!CL:0000219;4.46e-09;193!CL:0000235;4.90e-09;6!CL:0000163;8.01e-09;9!CL:0000988;8.88e-09;177!CL:0000771;2.55e-08;2!CL:0001014;2.67e-07;2!CL:0001016;2.67e-07;2!CL:0000094;3.16e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.84e-104,72;CL:0000557,4.59e-102,67;CL:0000839,6.71e-95,66;CL:0002009,3.63e-89,61;CL:0000473,1.01e-85,48;CL:0000234,1.01e-85,48;CL:0000763,5.99e-85,108;CL:0000049,5.99e-85,108;CL:0002194,9.98e-84,59;CL:0000576,9.98e-84,59;CL:0000040,9.98e-84,59;CL:0000559,9.98e-84,59;CL:0000860,8.81e-78,42;CL:0002057,8.81e-78,42;CL:0000738,1.90e-62,136;CL:0002032,3.53e-53,161;CL:0000837,3.53e-53,161;CL:0002031,2.29e-52,120;CL:0000037,1.80e-50,168;CL:0000988,2.67e-47,177;CL:0002087,2.63e-38,115;CL:0000134,1.46e-17,354;CL:0002320,5.54e-17,361;CL:0000453,1.40e-16,5;CL:0000097,1.59e-16,5;CL:0002028,1.59e-16,5;CL:0000219,6.11e-15,386;CL:0000990,1.35e-12,8;CL:0000048,1.92e-12,427;CL:0000723,4.25e-12,433;CL:0000034,1.18e-11,441;CL:0002619,1.48e-11,3;CL:0000451,3.49e-10,10;CL:0000235,3.68e-09,6;CL:0000163,4.90e-09,9;CL:0000771,2.22e-08,2;CL:0001014,3.19e-07,2;CL:0001016,3.19e-07,2;CL:0000094,3.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.56e-59;42!CL:0000049;3.02e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-51!80;UBERON:0002390!2.06e-50!102;UBERON:0003061!2.06e-50!102;UBERON:0002193!4.97e-50!112;UBERON:0001474!1.10e-46!86;UBERON:0002405!1.54e-41!115;UBERON:0004765!4.18e-38!101;UBERON:0001434!4.18e-38!101;UBERON:0007023!4.05e-22!115;UBERON:0003081!3.49e-17!216;UBERON:0002204!2.89e-16!167;UBERON:0000062!5.89e-10!511;UBERON:0001049!3.92e-08!57;UBERON:0005068!3.92e-08!57;UBERON:0006241!3.92e-08!57;UBERON:0007135!3.92e-08!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.33e-89,76;UBERON:0001474,1.46e-81,82;UBERON:0002405,8.35e-74,93;UBERON:0004765,2.16e-73,90;UBERON:0002390,1.64e-72,98;UBERON:0003061,1.64e-72,98;UBERON:0001434,5.37e-65,100;UBERON:0002193,8.58e-65,108;UBERON:0002204,1.59e-34,167;UBERON:0003081,3.40e-29,203;UBERON:0002384,3.42e-16,371;UBERON:0000926,9.77e-15,315;UBERON:0004120,9.77e-15,315;UBERON:0006603,9.77e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0.401088894940283,0,4.92614043327834,5.50619232232265,3.09090681161024,2.4717700592526,2.64513160582167,2.91100873425379,2.55671940596253,2.46700732813095,2.78735733805593,5.17846306179871,1.2808035326455,2.36482229888585,3.10271112662957,3.87290810150296,4.06279459783025,3.38836211176688,3.82068610080984,2.69668181334102,2.44867113896722,5.1348644332175,2.55734850319616,2.30895910130701,1.79517291859469,2.98357325372886,3.19230162491442,1.13477044938228,1.24564449799115,5.02497330513487,2.08593167368081,2.82345498116652,2.42159801053347,2.20966581592539,2.21523671208619,0.211255286311942,1.06302149982522,1.04829322754188,0.112328631146495,0.300353785683013,0.48217676009124,0.570025487482497,0.99458338599545,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,1.21890816109487,0.797747763113191,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,1.96973604869918,0.234004265139238,0.891786973732369,0,0,0,0,0,0,3.94130590316755,2.90559832243646,2.69526550203004,1.29707958075265,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,2.0247650239635,1.5476039091159,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.854299300541557,0.628817220398664,6.62782488555513,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,3.11776494143022,3.18875616752071,2.78061170234935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0.543757863814654,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.392616934229891,1.18818560130834,0.4226557275834,0,1.03382309777839,0.257831551894309,0,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.404234377916439,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p12@CXCL16 | |||
}} |
Latest revision as of 06:05, 25 September 2015
Short description: | p12@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CXCL16_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_uc002fyq.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.33e-89 | 76 |
bone element | 1.46e-81 | 82 |
immune system | 8.35e-74 | 93 |
skeletal element | 2.16e-73 | 90 |
hematopoietic system | 1.64e-72 | 98 |
blood island | 1.64e-72 | 98 |
skeletal system | 5.37e-65 | 100 |
hemolymphoid system | 8.58e-65 | 108 |
musculoskeletal system | 1.59e-34 | 167 |
lateral plate mesoderm | 3.40e-29 | 203 |
connective tissue | 3.42e-16 | 371 |
mesoderm | 9.77e-15 | 315 |
mesoderm-derived structure | 9.77e-15 | 315 |
presumptive mesoderm | 9.77e-15 | 315 |