FFCP PHASE1:Hg19::chr22:46684387..46684421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55020 | |EntrezGene=55020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26082 | |HGNC=26082 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000451998_5end | |association_with_transcript=0bp_to_ENST00000451998_5end | ||
|cluster_id=chr22:46684387..46684421,+ | |||
|description=CAGE_peak_3_at_TTC38_5end | |description=CAGE_peak_3_at_TTC38_5end | ||
|id=chr22:46684387..46684421,+ | |id=chr22:46684387..46684421,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.60e-32!172;CL:0000566!1.60e-32!172;CL:0000988!6.93e-32!182;CL:0002032!1.52e-29!165;CL:0000837!1.52e-29!165;CL:0000738!4.44e-22!140;CL:0000763!1.07e-15!112;CL:0000049!1.07e-15!112;CL:0002031!1.24e-13!124;CL:0000542!1.29e-13!53;CL:0000051!1.29e-13!53;CL:0000838!7.76e-13!52;CL:0002087!5.50e-12!119;CL:0000094!3.97e-10!8;CL:0000945!1.42e-09!24;CL:0000826!1.42e-09!24;CL:0000766!1.20e-07!76;CL:0002274!1.84e-07!5;CL:0000457!1.84e-07!5;CL:0002191!1.84e-07!5;CL:0000097!1.84e-07!5;CL:0000831!1.84e-07!5;CL:0002028!1.84e-07!5;CL:0000081!8.61e-07!11;CL:0000134!8.88e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.60e-32!172;CL:0000566!1.60e-32!172;CL:0000988!6.93e-32!182;CL:0002032!1.52e-29!165;CL:0000837!1.52e-29!165;CL:0000738!4.44e-22!140;CL:0000763!1.07e-15!112;CL:0000049!1.07e-15!112;CL:0002031!1.24e-13!124;CL:0000542!1.29e-13!53;CL:0000051!1.29e-13!53;CL:0000838!7.76e-13!52;CL:0002087!5.50e-12!119;CL:0000094!3.97e-10!8;CL:0000945!1.42e-09!24;CL:0000826!1.42e-09!24;CL:0000766!1.20e-07!76;CL:0002274!1.84e-07!5;CL:0000457!1.84e-07!5;CL:0002191!1.84e-07!5;CL:0000097!1.84e-07!5;CL:0000831!1.84e-07!5;CL:0002028!1.84e-07!5;CL:0000081!8.61e-07!11;CL:0000134!8.88e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.11e-14;24!CL:0000097;1.32e-12;5!CL:0000784;3.10e-12;3!CL:0000094;5.03e-12;8!CL:0000775;6.06e-12;3!CL:0000771;3.35e-09;2!CL:0000081;1.17e-08;11!CL:0000542;9.33e-08;53!CL:0000163;5.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.63e-29,168;CL:0000988,1.52e-27,177;CL:0002032,5.11e-26,161;CL:0000837,5.11e-26,161;CL:0000738,5.15e-20,136;CL:0000542,1.65e-15,53;CL:0000051,1.65e-15,53;CL:0000945,8.10e-15,24;CL:0000826,8.10e-15,24;CL:0000838,6.40e-14,52;CL:0000097,7.55e-13,5;CL:0002028,7.55e-13,5;CL:0000775,3.00e-12,3;CL:0000094,3.31e-12,8;CL:0000784,4.94e-12,3;CL:0000763,1.45e-11,108;CL:0000049,1.45e-11,108;CL:0002031,2.01e-10,120;CL:0000771,3.43e-09,2;CL:0000134,3.61e-09,354;CL:0002320,8.16e-09,361;CL:0000081,8.70e-09,11;CL:0002087,1.01e-07,115;CL:0000219,1.42e-07,386;CL:0000163,3.76e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;9.33e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.39e-18!51;DOID:0060083!1.39e-18!51;DOID:1240!5.05e-17!39;DOID:8692!1.03e-12!31 | |ontology_enrichment_disease=DOID:2531!1.39e-18!51;DOID:0060083!1.39e-18!51;DOID:1240!5.05e-17!39;DOID:8692!1.03e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.44e-15;39!DOID:2531;8.30e-14;51!DOID:0060083;8.30e-14;51!DOID:8692;4.48e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.93e-22,51;DOID:0060083,1.93e-22,51;DOID:1240,3.91e-21,39;DOID:8692,2.40e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.57e-09!112;UBERON:0002390!8.91e-08!102;UBERON:0003061!8.91e-08!102 | |ontology_enrichment_uberon=UBERON:0002193!5.57e-09!112;UBERON:0002390!8.91e-08!102;UBERON:0003061!8.91e-08!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.47e-08,371 | |||
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| ||
|short_description=p3@TTC38 | |short_description=p3@TTC38 | ||
}} | }} |
Latest revision as of 05:30, 25 September 2015
Short description: | p3@TTC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTC38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000451998_5end |
EntrezGene: | TTC38 |
HGNC: | 26082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.63e-29 | 168 |
hematopoietic cell | 1.52e-27 | 177 |
hematopoietic oligopotent progenitor cell | 5.11e-26 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-26 | 161 |
leukocyte | 5.15e-20 | 136 |
lymphocyte | 1.65e-15 | 53 |
common lymphoid progenitor | 1.65e-15 | 53 |
lymphocyte of B lineage | 8.10e-15 | 24 |
pro-B cell | 8.10e-15 | 24 |
lymphoid lineage restricted progenitor cell | 6.40e-14 | 52 |
mast cell | 7.55e-13 | 5 |
basophil mast progenitor cell | 7.55e-13 | 5 |
neutrophil | 3.00e-12 | 3 |
granulocyte | 3.31e-12 | 8 |
plasmacytoid dendritic cell | 4.94e-12 | 3 |
myeloid cell | 1.45e-11 | 108 |
common myeloid progenitor | 1.45e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 2.01e-10 | 120 |
eosinophil | 3.43e-09 | 2 |
mesenchymal cell | 3.61e-09 | 354 |
connective tissue cell | 8.16e-09 | 361 |
blood cell | 8.70e-09 | 11 |
nongranular leukocyte | 1.01e-07 | 115 |
motile cell | 1.42e-07 | 386 |
endocrine cell | 3.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.47e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.93e-22 | 51 |
immune system cancer | 1.93e-22 | 51 |
leukemia | 3.91e-21 | 39 |
myeloid leukemia | 2.40e-12 | 31 |