FFCP PHASE1:Hg19::chr22:46663517..46663533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55020 | |EntrezGene=55020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26082 | |HGNC=26082 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBU8 | |UniProt=F8WBU8 | ||
|association_with_transcript=-324bp_to_ENST00000417709_5end | |association_with_transcript=-324bp_to_ENST00000417709_5end | ||
|cluster_id=chr22:46663517..46663533,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_TTC38_5end | |description=CAGE_peak_4_at_TTC38_5end | ||
|id=chr22:46663517..46663533,+ | |id=chr22:46663517..46663533,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.31e-07!12;CL:0000417!5.31e-07!12;CL:0000668!5.31e-07!12;CL:0000414!5.31e-07!12;CL:0000412!5.31e-07!12;CL:0000182!5.31e-07!12 | |ontology_enrichment_celltype=CL:0000181!5.31e-07!12;CL:0000417!5.31e-07!12;CL:0000668!5.31e-07!12;CL:0000414!5.31e-07!12;CL:0000412!5.31e-07!12;CL:0000182!5.31e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.37e-29;1!CL:0000557;2.37e-29;1!CL:0000182;1.76e-10;12!CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:0002224;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.68e-10,12;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.31e-14;19!UBERON:0006925;3.31e-14;19!UBERON:0002423;5.65e-11;25!UBERON:0002368;8.28e-09;33!UBERON:0002365;8.33e-09;31!UBERON:0002330;8.33e-09;31!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.16e-14,19;UBERON:0006925,3.16e-14,19;UBERON:0008836,3.16e-14,19;UBERON:0008835,2.17e-12,22;UBERON:0003894,2.17e-12,22;UBERON:0009854,6.98e-12,23;UBERON:0007499,5.46e-11,25;UBERON:0009497,5.46e-11,25;UBERON:0000015,5.46e-11,25;UBERON:0002423,5.46e-11,25;UBERON:0006235,5.46e-11,25;UBERON:0004161,5.46e-11,25;UBERON:0009856,1.36e-10,26;UBERON:0002365,5.39e-09,31;UBERON:0002330,5.39e-09,31;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0002368,4.84e-08,35 | |||
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| ||
|short_description=p4@TTC38 | |short_description=p4@TTC38 | ||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p4@TTC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTC38_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -324bp_to_ENST00000417709_5end |
EntrezGene: | TTC38 |
HGNC: | 26082 |
UniProt: | F8WBU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.68e-10 | 12 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.16e-14 | 19 |
digestive gland | 3.16e-14 | 19 |
liver bud | 3.16e-14 | 19 |
hepatic diverticulum | 2.17e-12 | 22 |
liver primordium | 2.17e-12 | 22 |
digestive tract diverticulum | 6.98e-12 | 23 |
epithelial sac | 5.46e-11 | 25 |
epithelium of foregut-midgut junction | 5.46e-11 | 25 |
anatomical boundary | 5.46e-11 | 25 |
hepatobiliary system | 5.46e-11 | 25 |
foregut-midgut junction | 5.46e-11 | 25 |
septum transversum | 5.46e-11 | 25 |
sac | 1.36e-10 | 26 |
exocrine gland | 5.39e-09 | 31 |
exocrine system | 5.39e-09 | 31 |
cuboidal epithelium | 2.61e-08 | 4 |
transparent eye structure | 2.61e-08 | 4 |
simple cuboidal epithelium | 2.61e-08 | 4 |
cranial placode | 2.61e-08 | 4 |
lens of camera-type eye | 2.61e-08 | 4 |
epithelium of lens | 2.61e-08 | 4 |
lens placode | 2.61e-08 | 4 |
lens vesicle | 2.61e-08 | 4 |
endocrine gland | 4.84e-08 | 35 |