FFCP PHASE1:Hg19::chr16:22448237..22448246,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=641298 | |EntrezGene=641298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000446662,NR_027154,uc010bxf.2_5end | |association_with_transcript=-82bp_to_ENST00000446662,NR_027154,uc010bxf.2_5end | ||
|cluster_id=chr16:22448237..22448246,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_LOC641298_5end | |description=CAGE_peak_3_at_LOC641298_5end | ||
|id=chr16:22448237..22448246,+ | |id=chr16:22448237..22448246,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.67e-24!42;CL:0000860!2.40e-22!45;CL:0000557!3.83e-19!71;CL:0002009!1.70e-18!65;CL:0000839!1.63e-16!70;CL:0002194!3.39e-16!63;CL:0000576!3.39e-16!63;CL:0000040!3.39e-16!63;CL:0000559!3.39e-16!63;CL:0000766!7.33e-16!76;CL:0000763!1.98e-12!112;CL:0000049!1.98e-12!112;CL:0000738!2.60e-10!140;CL:0002031!1.70e-09!124;CL:0002032!2.90e-07!165;CL:0000837!2.90e-07!165;CL:0000037!3.21e-07!172;CL:0000566!3.21e-07!172;CL:0002087!4.03e-07!119;CL:0000988!7.95e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.67e-24!42;CL:0000860!2.40e-22!45;CL:0000557!3.83e-19!71;CL:0002009!1.70e-18!65;CL:0000839!1.63e-16!70;CL:0002194!3.39e-16!63;CL:0000576!3.39e-16!63;CL:0000040!3.39e-16!63;CL:0000559!3.39e-16!63;CL:0000766!7.33e-16!76;CL:0000763!1.98e-12!112;CL:0000049!1.98e-12!112;CL:0000738!2.60e-10!140;CL:0002031!1.70e-09!124;CL:0002032!2.90e-07!165;CL:0000837!2.90e-07!165;CL:0000037!3.21e-07!172;CL:0000566!3.21e-07!172;CL:0002087!4.03e-07!119;CL:0000988!7.95e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-88;33!CL:0002057;4.27e-88;33!CL:0000473;3.51e-66;39!CL:0000234;3.51e-66;39!CL:0000576;1.49e-43;48!CL:0000766;3.40e-26;69!CL:0002087;1.09e-11;104!CL:0000763;3.68e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-78,42;CL:0002057,3.08e-78,42;CL:0000473,3.34e-68,48;CL:0000234,3.34e-68,48;CL:0002194,3.82e-54,59;CL:0000576,3.82e-54,59;CL:0000040,3.82e-54,59;CL:0000559,3.82e-54,59;CL:0002009,2.49e-52,61;CL:0000839,2.89e-48,66;CL:0000557,1.59e-47,67;CL:0000766,4.03e-44,72;CL:0000763,8.13e-29,108;CL:0000049,8.13e-29,108;CL:0002087,6.12e-27,115;CL:0002031,9.87e-26,120;CL:0000738,1.86e-22,136;CL:0002032,1.26e-18,161;CL:0000837,1.26e-18,161;CL:0000037,9.35e-18,168;CL:0000988,9.78e-17,177;CL:0000134,4.11e-07,354;CL:0002320,6.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-59;42!CL:0000049;1.77e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.12e-16!86;UBERON:0002371!5.49e-16!80;UBERON:0004765!1.24e-14!101;UBERON:0001434!1.24e-14!101;UBERON:0002390!1.89e-14!102;UBERON:0003061!1.89e-14!102;UBERON:0002193!3.71e-13!112;UBERON:0002405!8.87e-11!115;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57;UBERON:0002204!5.03e-07!167;UBERON:0002616!5.06e-07!59 | |ontology_enrichment_uberon=UBERON:0001474!2.12e-16!86;UBERON:0002371!5.49e-16!80;UBERON:0004765!1.24e-14!101;UBERON:0001434!1.24e-14!101;UBERON:0002390!1.89e-14!102;UBERON:0003061!1.89e-14!102;UBERON:0002193!3.71e-13!112;UBERON:0002405!8.87e-11!115;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57;UBERON:0002204!5.03e-07!167;UBERON:0002616!5.06e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-41,76;UBERON:0001474,1.53e-38,82;UBERON:0004765,5.83e-35,90;UBERON:0002405,8.97e-34,93;UBERON:0002390,5.91e-32,98;UBERON:0003061,5.91e-32,98;UBERON:0001434,2.81e-31,100;UBERON:0002193,8.13e-29,108;UBERON:0002204,7.09e-18,167;UBERON:0003081,2.72e-14,203;UBERON:0000926,2.55e-08,315;UBERON:0004120,2.55e-08,315;UBERON:0006603,2.55e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0.697287110717054,2.46700732813095,2.78735733805593,5.17846306179871,5.63553554364021,3.07426898855161,1.37898272294647,1.93645405075148,0,0,0.545812300115692,0.449446968890169,0.306083892370903,1.28371610830437,1.27867425159808,2.63881040149373,3.98927315243264,2.98357325372886,1.16083695451434,0,0,9.54744927975624,10.429658368404,5.2125322729228,0,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0.697287110717054,2.46700732813095,2.78735733805593,5.17846306179871,5.63553554364021,3.07426898855161,1.37898272294647,1.93645405075148,0,0,0.545812300115692,0.449446968890169,0.306083892370903,1.28371610830437,1.27867425159808,2.63881040149373,3.98927315243264,2.98357325372886,1.16083695451434,0,0,9.54744927975624,10.429658368404,5.2125322729228,0,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p3@LOC641298 | |short_description=p3@LOC641298 | ||
}} | }} |
Latest revision as of 05:16, 25 September 2015
Short description: | p3@LOC641298 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC641298_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -82bp_to_ENST00000446662, NR_027154, uc010bxf.2_5end |
EntrezGene: | LOC641298 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-78 | 42 |
defensive cell | 3.34e-68 | 48 |
phagocyte | 3.34e-68 | 48 |
monopoietic cell | 3.82e-54 | 59 |
monocyte | 3.82e-54 | 59 |
monoblast | 3.82e-54 | 59 |
promonocyte | 3.82e-54 | 59 |
macrophage dendritic cell progenitor | 2.49e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.89e-48 | 66 |
granulocyte monocyte progenitor cell | 1.59e-47 | 67 |
myeloid leukocyte | 4.03e-44 | 72 |
myeloid cell | 8.13e-29 | 108 |
common myeloid progenitor | 8.13e-29 | 108 |
nongranular leukocyte | 6.12e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 9.87e-26 | 120 |
leukocyte | 1.86e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.26e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-18 | 161 |
hematopoietic stem cell | 9.35e-18 | 168 |
hematopoietic cell | 9.78e-17 | 177 |
mesenchymal cell | 4.11e-07 | 354 |
connective tissue cell | 6.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-41 | 76 |
bone element | 1.53e-38 | 82 |
skeletal element | 5.83e-35 | 90 |
immune system | 8.97e-34 | 93 |
hematopoietic system | 5.91e-32 | 98 |
blood island | 5.91e-32 | 98 |
skeletal system | 2.81e-31 | 100 |
hemolymphoid system | 8.13e-29 | 108 |
musculoskeletal system | 7.09e-18 | 167 |
lateral plate mesoderm | 2.72e-14 | 203 |
mesoderm | 2.55e-08 | 315 |
mesoderm-derived structure | 2.55e-08 | 315 |
presumptive mesoderm | 2.55e-08 | 315 |