FFCP PHASE1:Hg19::chr19:11529980..11529998,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:11529980..11529998,- to FFCP PHASE1:Hg19::chr19:11529980..11529998,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57139 | |EntrezGene=57139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30282 | |HGNC=30282 | ||
|TSSclassifier=strong | |||
|UniProt=B4DE00 | |UniProt=B4DE00 | ||
|association_with_transcript=0bp_to_ENST00000453604_5end | |||
|cluster_id=chr19:11529980..11529998,- | |||
|coexpression_cluster_id=C3748 | |||
|description=CAGE_peak_1_at_RGL3_5end | |||
|id=chr19:11529980..11529998,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0002532;7.06e-08;206!UBERON:0010316;7.06e-08;206!UBERON:0006603;1.41e-07;65!UBERON:0003104;3.11e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.44e-09!106;DOID:0050687!4.51e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.64e-12,106;DOID:0050687,1.71e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.58e-30!115;UBERON:0000025!1.07e-14!194;UBERON:0001049!1.13e-14!57;UBERON:0005068!1.13e-14!57;UBERON:0006241!1.13e-14!57;UBERON:0007135!1.13e-14!57;UBERON:0000062!1.39e-14!511;UBERON:0004111!1.39e-13!241;UBERON:0000477!1.02e-12!286;UBERON:0005743!1.03e-12!86;UBERON:0001017!2.41e-12!82;UBERON:0003080!3.40e-12!42;UBERON:0002780!6.43e-12!41;UBERON:0001890!6.43e-12!41;UBERON:0006240!6.43e-12!41;UBERON:0000955!2.17e-11!69;UBERON:0006238!2.17e-11!69;UBERON:0002616!3.42e-11!59;UBERON:0000073!5.38e-11!94;UBERON:0001016!5.38e-11!94;UBERON:0003075!9.73e-11!86;UBERON:0007284!9.73e-11!86;UBERON:0000468!3.46e-10!659;UBERON:0002020!1.39e-09!34;UBERON:0003528!1.39e-09!34;UBERON:0002346!2.94e-09!90;UBERON:0001893!3.32e-09!34;UBERON:0002791!4.94e-09!33;UBERON:0000467!6.45e-09!625;UBERON:0000480!9.34e-09!626;UBERON:0000481!2.65e-08!347;UBERON:0001869!2.81e-08!32;UBERON:0004921!5.11e-08!129;UBERON:0004185!5.11e-08!129;UBERON:0000922!6.46e-08!612;UBERON:0003056!8.32e-08!61;UBERON:0002619!8.68e-08!22;UBERON:0000077!9.35e-08!130;UBERON:0000466!9.98e-08!126;UBERON:0000483!1.52e-07!309;UBERON:0000064!2.24e-07!219;UBERON:0005177!2.42e-07!107;UBERON:0000119!3.29e-07!312;UBERON:0001007!6.64e-07!155;UBERON:0001555!6.64e-07!155;UBERON:0007026!6.64e-07!155;UBERON:0001950!6.98e-07!20;UBERON:0009497!8.49e-07!25;UBERON:0000015!8.49e-07!25;UBERON:0002423!8.49e-07!25;UBERON:0006235!8.49e-07!25;UBERON:0004161!8.49e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.37e-10;114!UBERON:0002780;1.22e-09;41!UBERON:0001890;1.22e-09;41!UBERON:0000073;4.02e-09;53!UBERON:0002616;4.02e-09;53!UBERON:0003528;1.54e-08;34!UBERON:0002020;1.54e-08;34!UBERON:0001893;2.51e-08;34!UBERON:0002791;3.78e-08;32!UBERON:0001869;8.11e-08;32!UBERON:0002423;1.24e-07;25!UBERON:0002619;2.42e-07;22!UBERON:0002075;9.01e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.90e-33,114;UBERON:0001049,2.38e-16,56;UBERON:0005068,2.38e-16,56;UBERON:0006241,2.38e-16,56;UBERON:0007135,2.38e-16,56;UBERON:0011216,8.91e-16,223;UBERON:0000073,5.99e-15,53;UBERON:0002616,5.99e-15,53;UBERON:0001017,7.28e-14,81;UBERON:0000025,1.79e-13,192;UBERON:0002780,6.72e-13,41;UBERON:0001890,6.72e-13,41;UBERON:0003080,6.72e-13,41;UBERON:0006240,6.72e-13,41;UBERON:0000955,1.60e-12,68;UBERON:0006238,1.60e-12,68;UBERON:0001016,1.77e-12,89;UBERON:0004111,4.26e-12,240;UBERON:0003075,2.64e-11,82;UBERON:0007284,2.64e-11,82;UBERON:0003528,3.76e-10,34;UBERON:0002020,3.76e-10,34;UBERON:0002346,5.35e-10,86;UBERON:0005177,9.86e-10,101;UBERON:0001893,1.01e-09,34;UBERON:0002791,4.69e-09,32;UBERON:0001869,1.20e-08,32;UBERON:0005172,1.82e-08,54;UBERON:0005173,1.82e-08,54;UBERON:0009497,7.73e-08,25;UBERON:0000015,7.73e-08,25;UBERON:0002423,7.73e-08,25;UBERON:0006235,7.73e-08,25;UBERON:0004161,7.73e-08,25;UBERON:0003056,1.30e-07,61;UBERON:0002619,1.81e-07,22;UBERON:0010371,2.32e-07,104;UBERON:0002075,7.66e-07,18 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,3.19454117451962,5.58240934377942,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.56740831967947,0,1.03030227053675,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,3.02699751316684,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.722878304769133,0.50133791063589,2.31754430337318,0,4.37971383272372,0,0,0.087834785693126,7.92423406761161,0,0,4.21911611751088,5.22389211897802,3.85578085504709,0.238490624305342,0,0.371457501329565,0.993812036833525,0.860234595106124,1.38856200643038,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0.33472061276467,2.81980521976403,1.52054421143703,1.95249646038536,0.735326160691737,0.81014194788176,0.17859945656816,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0.662045904066094,1.43418310374407,0,0,0,0,0,0.67355336034844,0.326923806226917,0,0,0,0,0,0.298897361103602,0,0,0,3.87892925384297,0.122834317311768,5.16628905878827,0,0,0,0,0.505008341862199,0.125118519871964,1.6623846929051,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,1.20036438433761,0,2.83404594050192,0.744467425326359,1.5189869901714,0.68205903612839,0.504867548488229,0.184099797284599,1.93975268182574,0.710019185033229,0,0.169560592310488,0,0,0,6.83052754325734,7.81925633096763,6.62305474356255,3.42081481550722,4.28945446488568,8.02950189966826,1.56449532329816,1.28648187638577,0,0.464367928031979,0,2.83936320095625,2.86593973132773,1.92808823906786,2.09558548191549,2.39667388501647,1.89816495288877,1.8876383142423,5.69042248863504,1.15424147083917,1.4763109092493,0,0,0,10.1404027857465,6.87979051674338,15.9513274803979,0,3.19769940212095,0,0,0,0,0,0,2.07986957055916,0,0.579652024875384,0,1.01056513432752,1.38895653772983,1.33177906564219,0,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0,0,0,0,0,2.95597942737566,6.33948724895227,11.1957182392017,13.2590357143605,11.614303875227,1.39695367442772,3.4378958300245,4.68869788840188,0,0.925447434329912,1.50171528921959,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,1.14382394926518,3.25572963234866,0.823240336780769,0,2.84313558994037,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,1.15825045334063,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,2.70362119990049,3.56857977594324,3.6271555457805,4.09994952474496,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0.30239029332968,0,0.920771839728375,0.280660094433074,0,0,0.321707842287215,2.96836132889982,0,0,0.0821271560138091,1.03850885836724,0,4.83437798366489,0,0,0.114814448164607,0.546273504020151,0.393373244878272,5.86559496779635,5.16002758599579,2.35304930753057,5.84556898613043,2.21658420675039,1.13733384070897,0,0,3.08454505380579,0,0.501689773854853,6.88165937221603,11.6350641250021,1.79099803777743,0,0,0.256450125116389,0.328014645699706,0.650756789328606,9.99497812982906,0.27470839445503,1.15513299888823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,10.3888074454111,0.6970372701606,0,0,2.60979897622522,0,0.143124886741991,0,0,0.571890581771475,0,0,0,1.56989728039846,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,8.5670858706869,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,6.37104561550682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667396566847634,0,0,0,0,0,0,0,4.39524537815682,0,0,0,3.58116727106535,0.890894042497916,2.15012491469462,9.94147647766298,8.58083440104128,0,0,0,10.1616474008046,1.65770349318689,25.1932747854276,4.39755334759266,0,0,10.6943337865319,4.47552936689023,2.55786185113436,3.94573622547734,0,11.1136990144637,1.93866549219044,3.06134723934109,0,0,34.8090799984859,3.62499787717397,0,8.39037045966129,12.7649348154686,0,0,0.694499979733169,8.85741385813839,8.20055782652774,1.52581736317083,4.86548743697388,1.77328571372128,1.97446857438575,5.22904624891153,0,6.54077197282275,0.341826167541004,4.38071418337314,8.7064915077479,1.62971057883012,11.4840417503491,3.66390373607449,18.6562171606522,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,20.8937994443709,3.8165329287164,0,3.98104772431402,3.80367527364358,2.4441205797345,0.889563386041866,0,0.522109747527277,6.20090423422229,0,2.10838001152805,0,0,4.12726645207958,35.5125962564451,2.41981432097328,0.30607276163049,2.96976924253893,0,0,5.31723098165748,3.30991955875499,9.41798755221676,5.97362148864794,9.10750547295337,6.65638430463066,11.2813829917835,0,0,23.413373544432,0,8.32104449086132,10.9633975629278,9.19693118995943,1.93978032976839,0,1.12990370390266,0,0,2.27918865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| ||
|short_description=p1@RGL3 | |||
}} | }} |
Latest revision as of 05:14, 25 September 2015
Short description: | p1@RGL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGL3_5end |
Coexpression cluster: | C3748_smallcell_thyroid_seminal_ductus_breast_somatostatinoma_small |
Association with transcript: | 0bp_to_ENST00000453604_5end |
EntrezGene: | RGL3 |
HGNC: | 30282 |
UniProt: | B4DE00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.64e-12 | 106 |
cell type cancer | 1.71e-10 | 143 |