FFCP PHASE1:Hg19::chr17:46132044..46132080,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46132044..46132080,+ to FFCP PHASE1:Hg19::chr17:46132044..46132080,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4779 | |EntrezGene=4779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7781 | |HGNC=7781 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1B7 | |UniProt=F5H1B7 | ||
|association_with_transcript=0bp_to_ENST00000536222,uc010wlf.1_5end | |||
|cluster_id=chr17:46132044..46132080,+ | |||
|description=CAGE_peak_4_at_NFE2L1_5end | |||
|id=chr17:46132044..46132080,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.02e-14!180;CL:0000057!4.34e-11!75;CL:0000221!1.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.86e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.98e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.41e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000924!5.07e-15!173;UBERON:0006601!5.07e-15!173;UBERON:0004121!5.21e-15!169;UBERON:0000475!2.23e-13!365;UBERON:0003075!9.43e-13!86;UBERON:0007284!9.43e-13!86;UBERON:0002346!1.32e-12!90;UBERON:0000033!2.08e-12!123;UBERON:0000073!2.53e-12!94;UBERON:0001016!2.53e-12!94;UBERON:0003056!4.44e-12!61;UBERON:0005743!7.86e-12!86;UBERON:0000153!2.47e-11!129;UBERON:0007811!2.47e-11!129;UBERON:0001017!1.60e-10!82;UBERON:0001049!2.15e-10!57;UBERON:0005068!2.15e-10!57;UBERON:0006241!2.15e-10!57;UBERON:0007135!2.15e-10!57;UBERON:0000955!2.18e-09!69;UBERON:0006238!2.18e-09!69;UBERON:0002616!2.97e-09!59;UBERON:0002780!1.23e-08!41;UBERON:0001890!1.23e-08!41;UBERON:0006240!1.23e-08!41;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0001893!1.73e-08!34;UBERON:0003080!3.59e-08!42;UBERON:0002791!5.35e-08!33;UBERON:0001869!7.51e-08!32;UBERON:0000119!2.93e-07!312;UBERON:0000064!3.18e-07!219;UBERON:0000483!3.41e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.77e-07;34!UBERON:0003528;3.12e-07;34!UBERON:0002020;3.12e-07;34!UBERON:0000991;7.63e-07;21!UBERON:0001869;8.02e-07;32!UBERON:0002791;8.94e-07;32!UBERON:0002619;9.35e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,9.52e-12,82;UBERON:0007284,9.52e-12,82;UBERON:0010371,1.91e-11,104;UBERON:0002346,2.11e-11,86;UBERON:0004121,5.09e-11,171;UBERON:0000924,5.09e-11,171;UBERON:0006601,5.09e-11,171;UBERON:0001049,8.56e-11,56;UBERON:0005068,8.56e-11,56;UBERON:0006241,8.56e-11,56;UBERON:0007135,8.56e-11,56;UBERON:0003056,1.58e-10,61;UBERON:0001017,2.67e-10,81;UBERON:0001016,3.11e-10,89;UBERON:0000073,1.68e-09,53;UBERON:0002616,1.68e-09,53;UBERON:0003528,6.61e-09,34;UBERON:0002020,6.61e-09,34;UBERON:0010314,7.77e-09,132;UBERON:0001893,8.84e-09,34;UBERON:0000955,1.20e-08,68;UBERON:0006238,1.20e-08,68;UBERON:0002780,2.62e-08,41;UBERON:0001890,2.62e-08,41;UBERON:0003080,2.62e-08,41;UBERON:0006240,2.62e-08,41;UBERON:0001869,5.83e-08,32;UBERON:0002791,7.35e-08,32;UBERON:0002619,4.46e-07,22;UBERON:0000991,6.56e-07,21;UBERON:0009196,6.56e-07,21;UBERON:0009117,6.56e-07,21;UBERON:0005564,6.56e-07,21 | |||
|phase1_expression=1.45342703416445,3.63970890614671,2.11431606143957,0,1.34088328328186,0.872338524100369,5.06599756336621,3.15859936713415,0,0.245733936501509,0,3.27662058195258,1.05506791291381,0,0,0,0,0,0,0.492484232307152,0,7.52291331547411,0,0.410623275218653,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09160197899297,2.1686349143074,0.50133791063589,0.869079113764942,1.5905718941022,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,0.851363990735132,18.2147644146271,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,3.47880366186723,1.8994576749687,2.38336525463794,5.73673241497627,3.19201543978521,1.12135520028461,3.20246987189115,2.96001058100592,0.622422070799533,4.17603083416033,0,1.96764655938411,0.576175924479999,52.2536792989366,0,0,0.149448680551801,0.587172493218824,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,1.96318984233954,1.18800285728205,8.65434252474949,5.46096817162816,17.965453545406,0.168336113954066,0,0.277064115484183,1.31693286264251,0.919463387397059,2.70428506031874,0.113432183160021,1.25572744982203,1.49490172172997,0.423863802319124,0.600182192168805,0.412210116953756,3.34932702059318,3.90845398296339,0.168776332241266,2.33848812386877,0.252433774244115,0.552299391853796,0.646584227275248,0,0.302256294682921,0.508681776931463,0.193260853163297,1.09098448236334,0,11.9534232007003,12.7228577588626,9.41170937243099,6.53064646596834,13.1206842455327,10.2193660541232,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.343135620597051,4.39001141634502,14.6122279234905,3.61904300681871,0.833296006426766,12.7065239071027,1.03993478527958,0,0.34779121492523,2.23076519048061,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,1.17587489739202,0.283550194484773,3.58234090811393,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0.763976851116555,0,0,0,0,0.571652865261156,0.224262168690721,0.87192013766656,0,6.98067265092,3.57656445851882,0,1.32969058292435,1.04007436911366,0,0,0,5.43316375900961,1.08524321078289,0.823240336780769,0,6.04166312862328,0,1.80863626235752,2.61460037580088,0.099972991182057,0,0,0,1.67737398844108,6.89171615004683,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98391526069709,1.03985430765404,4.81758269752337,2.05013139544115,2.57711112983969,1.50473049863859,11.3703752027992,2.0694614258501,0,0.184369168541703,0.868836144680828,0.587403472388222,1.37257369524342,0,0,0,0.606255142892519,14.9791895559447,10.5836602665388,4.71404834855676,4.60385919864187,3.36792113319688,5.50998341799514,2.55853624533352,3.53878626515936,4.45254199334973,0,0.355123450626254,0.246381468041427,2.07701771673448,0,0,0,1.84161977871793,2.75554675595056,0.182091168006717,1.18011973463482,9.02399225814824,1.07821471946181,1.56869953835371,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,2.03901018436031,9.97291210714469,0,0,0,1.79515087581472,1.31205858279882,12.6897573919078,0,0,0,1.14853107599234,2.60024098414608,1.6068392984416,17.7874121657504,0,0.307007349452259,0,2.79292636657511,0.145016693914229,0,4.00644160410318,0.826424576804891,1.34533047155574,0,1.31505115112215,4.64845549297286,1.25924938732256,0.6970372701606,0.308033580176089,1.06461206063404,0,2.03856641014312,4.15062171551775,1.116475108079,0,0,0.767693373934002,1.71175595213568,1.27281299170375,0.78494864019923,0.719489830333259,1.09814811894422,0.942499218765491,1.2130948894399,0,0,1.95053495635836,0.243713489631284,0,2.32049849393576,6.92886616573193,0,0,0,0.876901770507525,1.15755106853338,0,0.202910376962704,0.92947049429925,0.563391205064483,0.143411352204052,2.94747123039363,0,0.354761064070598,2.11107635297664,4.28083360847872,1.89736586882858,9.09830272636956,7.69776901804097,0,7.62236894029258,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.56377770705936,0,0,3.34445715226294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,7.95318118213038,2.11004124615769,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0.969332746095218,1.48428957058962,0,0,0,0,2.61724931056649,0,0.236387681767936,0,0.291604613383254,2.43074992906609,0,1.4471572635049,0,0.552896299656123,0,2.85201016300164,1.74301541630384,0.278847488557207,0.0769502585037971,0,0.46112780877612,0,0.434589487688032,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,2.10838001152805,0,0,0,0,0,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72236422610278,0,0,0,0.39961921916426,0,0,0,0,0.621262677827163,0,0.951329442515298,1.04602846312333,0,1.44475294950759,1.20084057741958,1.2321484100279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| ||
|short_description=p4@NFE2L1 | |||
}} | }} |
Latest revision as of 05:12, 25 September 2015
Short description: | p4@NFE2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFE2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536222, uc010wlf.1_5end |
EntrezGene: | NFE2L1 |
HGNC: | 7781 |
UniProt: | F5H1B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neural plate | 9.52e-12 | 82 |
presumptive neural plate | 9.52e-12 | 82 |
ecto-epithelium | 1.91e-11 | 104 |
neurectoderm | 2.11e-11 | 86 |
ectoderm-derived structure | 5.09e-11 | 171 |
ectoderm | 5.09e-11 | 171 |
presumptive ectoderm | 5.09e-11 | 171 |
neural tube | 8.56e-11 | 56 |
neural rod | 8.56e-11 | 56 |
future spinal cord | 8.56e-11 | 56 |
neural keel | 8.56e-11 | 56 |
pre-chordal neural plate | 1.58e-10 | 61 |
central nervous system | 2.67e-10 | 81 |
nervous system | 3.11e-10 | 89 |
regional part of nervous system | 1.68e-09 | 53 |
regional part of brain | 1.68e-09 | 53 |
brain grey matter | 6.61e-09 | 34 |
gray matter | 6.61e-09 | 34 |
structure with developmental contribution from neural crest | 7.77e-09 | 132 |
telencephalon | 8.84e-09 | 34 |
brain | 1.20e-08 | 68 |
future brain | 1.20e-08 | 68 |
regional part of forebrain | 2.62e-08 | 41 |
forebrain | 2.62e-08 | 41 |
anterior neural tube | 2.62e-08 | 41 |
future forebrain | 2.62e-08 | 41 |
cerebral hemisphere | 5.83e-08 | 32 |
regional part of telencephalon | 7.35e-08 | 32 |
regional part of cerebral cortex | 4.46e-07 | 22 |
gonad | 6.56e-07 | 21 |
indifferent external genitalia | 6.56e-07 | 21 |
indifferent gonad | 6.56e-07 | 21 |
gonad primordium | 6.56e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.41e-07 | 14 |