FFCP PHASE1:Hg19::chr4:13629269..13629372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=259282 | |EntrezGene=259282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31792 | |HGNC=31792 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFC6,F8WDD0 | |UniProt=Q8NFC6,F8WDD0 | ||
|association_with_transcript=0bp_to_ENST00000040738,ENST00000482713,NM_148894,uc003gmz.1,uc010idr.1,uc010ids.1_5end | |association_with_transcript=0bp_to_ENST00000040738,ENST00000482713,NM_148894,uc003gmz.1,uc010idr.1,uc010ids.1_5end | ||
|cluster_id=chr4:13629269..13629372,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_BOD1L_5end | |description=CAGE_peak_1_at_BOD1L_5end | ||
|id=chr4:13629269..13629372,- | |id=chr4:13629269..13629372,- | ||
|ontology_enrichment_celltype=CL:0000738!2.13e-21!140;CL:0002087!9.75e-19!119;CL:0002031!2.87e-18!124;CL:0002057!5.52e-17!42;CL:0000037!7.48e-17!172;CL:0000566!7.48e-17!172;CL:0000766!7.74e-17!76;CL:0000860!2.23e-16!45;CL:0002032!3.14e-15!165;CL:0000837!3.14e-15!165;CL:0000557!2.44e-14!71;CL:0000988!1.15e-13!182;CL:0000839!1.40e-13!70;CL:0002194!9.96e-13!63;CL:0000576!9.96e-13!63;CL:0000040!9.96e-13!63;CL:0000559!9.96e-13!63;CL:0002009!2.51e-12!65;CL:0000763!7.89e-10!112;CL:0000049!7.89e-10!112 | |ontology_enrichment_celltype=CL:0000738!2.13e-21!140;CL:0002087!9.75e-19!119;CL:0002031!2.87e-18!124;CL:0002057!5.52e-17!42;CL:0000037!7.48e-17!172;CL:0000566!7.48e-17!172;CL:0000766!7.74e-17!76;CL:0000860!2.23e-16!45;CL:0002032!3.14e-15!165;CL:0000837!3.14e-15!165;CL:0000557!2.44e-14!71;CL:0000988!1.15e-13!182;CL:0000839!1.40e-13!70;CL:0002194!9.96e-13!63;CL:0000576!9.96e-13!63;CL:0000040!9.96e-13!63;CL:0000559!9.96e-13!63;CL:0002009!2.51e-12!65;CL:0000763!7.89e-10!112;CL:0000049!7.89e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-14;33!CL:0002057;1.84e-14;33!CL:0000576;1.91e-10;48!CL:0000473;1.32e-09;39!CL:0000234;1.32e-09;39!CL:0000766;5.25e-08;69!CL:0002087;3.56e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.86e-21,136;CL:0002087,1.23e-18,115;CL:0002031,3.78e-18,120;CL:0000860,5.52e-17,42;CL:0002057,5.52e-17,42;CL:0000766,6.84e-17,72;CL:0000037,1.21e-16,168;CL:0002032,5.02e-15,161;CL:0000837,5.02e-15,161;CL:0000557,2.33e-14,67;CL:0000988,6.16e-14,177;CL:0000839,1.38e-13,66;CL:0000473,1.39e-13,48;CL:0000234,1.39e-13,48;CL:0002194,9.40e-13,59;CL:0000576,9.40e-13,59;CL:0000040,9.40e-13,59;CL:0000559,9.40e-13,59;CL:0002009,2.51e-12,61;CL:0000763,1.16e-09,108;CL:0000049,1.16e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.93e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-24!115;UBERON:0002390!2.66e-17!102;UBERON:0003061!2.66e-17!102;UBERON:0002193!3.31e-14!112;UBERON:0001049!2.94e-12!57;UBERON:0005068!2.94e-12!57;UBERON:0006241!2.94e-12!57;UBERON:0007135!2.94e-12!57;UBERON:0001017!5.83e-12!82;UBERON:0001474!7.16e-12!86;UBERON:0002371!1.10e-11!80;UBERON:0000073!6.12e-11!94;UBERON:0001016!6.12e-11!94;UBERON:0003080!1.05e-10!42;UBERON:0000955!1.10e-10!69;UBERON:0006238!1.10e-10!69;UBERON:0002780!1.81e-10!41;UBERON:0001890!1.81e-10!41;UBERON:0006240!1.81e-10!41;UBERON:0005743!4.30e-10!86;UBERON:0004765!7.02e-10!101;UBERON:0001434!7.02e-10!101;UBERON:0002616!1.27e-09!59;UBERON:0002020!2.39e-09!34;UBERON:0003528!2.39e-09!34;UBERON:0002791!1.29e-08!33;UBERON:0001893!1.85e-08!34;UBERON:0002619!2.94e-08!22;UBERON:0001869!3.71e-08!32;UBERON:0001950!2.03e-07!20;UBERON:0000178!2.41e-07!15;UBERON:0000179!2.41e-07!15;UBERON:0000463!2.41e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.04e-24!115;UBERON:0002390!2.66e-17!102;UBERON:0003061!2.66e-17!102;UBERON:0002193!3.31e-14!112;UBERON:0001049!2.94e-12!57;UBERON:0005068!2.94e-12!57;UBERON:0006241!2.94e-12!57;UBERON:0007135!2.94e-12!57;UBERON:0001017!5.83e-12!82;UBERON:0001474!7.16e-12!86;UBERON:0002371!1.10e-11!80;UBERON:0000073!6.12e-11!94;UBERON:0001016!6.12e-11!94;UBERON:0003080!1.05e-10!42;UBERON:0000955!1.10e-10!69;UBERON:0006238!1.10e-10!69;UBERON:0002780!1.81e-10!41;UBERON:0001890!1.81e-10!41;UBERON:0006240!1.81e-10!41;UBERON:0005743!4.30e-10!86;UBERON:0004765!7.02e-10!101;UBERON:0001434!7.02e-10!101;UBERON:0002616!1.27e-09!59;UBERON:0002020!2.39e-09!34;UBERON:0003528!2.39e-09!34;UBERON:0002791!1.29e-08!33;UBERON:0001893!1.85e-08!34;UBERON:0002619!2.94e-08!22;UBERON:0001869!3.71e-08!32;UBERON:0001950!2.03e-07!20;UBERON:0000178!2.41e-07!15;UBERON:0000179!2.41e-07!15;UBERON:0000463!2.41e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.13e-08;22!UBERON:0002791;6.00e-08;32!UBERON:0003528;7.12e-08;34!UBERON:0002020;7.12e-08;34!UBERON:0002780;7.34e-08;41!UBERON:0001890;7.34e-08;41!UBERON:0001869;1.69e-07;32!UBERON:0001950;2.13e-07;20!UBERON:0000178;2.79e-07;15!UBERON:0000179;2.79e-07;15!UBERON:0000463;2.79e-07;15!UBERON:0001893;3.81e-07;34!UBERON:0007023;4.90e-07;114 | |||
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| ||
|short_description=p1@BOD1L | |short_description=p1@BOD1L | ||
}} | }} |
Latest revision as of 05:01, 25 September 2015
Short description: | p1@BOD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BOD1L_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000040738, ENST00000482713, NM_148894, uc003gmz.1, uc010idr.1, uc010ids.1_5end |
EntrezGene: | BOD1L |
HGNC: | 31792 |
UniProt: | Q8NFC6F8WDD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.86e-21 | 136 |
nongranular leukocyte | 1.23e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.78e-18 | 120 |
classical monocyte | 5.52e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.52e-17 | 42 |
myeloid leukocyte | 6.84e-17 | 72 |
hematopoietic stem cell | 1.21e-16 | 168 |
hematopoietic oligopotent progenitor cell | 5.02e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.02e-15 | 161 |
granulocyte monocyte progenitor cell | 2.33e-14 | 67 |
hematopoietic cell | 6.16e-14 | 177 |
myeloid lineage restricted progenitor cell | 1.38e-13 | 66 |
defensive cell | 1.39e-13 | 48 |
phagocyte | 1.39e-13 | 48 |
monopoietic cell | 9.40e-13 | 59 |
monocyte | 9.40e-13 | 59 |
monoblast | 9.40e-13 | 59 |
promonocyte | 9.40e-13 | 59 |
macrophage dendritic cell progenitor | 2.51e-12 | 61 |
myeloid cell | 1.16e-09 | 108 |
common myeloid progenitor | 1.16e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.22e-23 | 114 |
hematopoietic system | 3.09e-17 | 98 |
blood island | 3.09e-17 | 98 |
hemolymphoid system | 4.49e-14 | 108 |
nervous system | 1.46e-12 | 89 |
neural tube | 5.09e-12 | 56 |
neural rod | 5.09e-12 | 56 |
future spinal cord | 5.09e-12 | 56 |
neural keel | 5.09e-12 | 56 |
bone element | 9.00e-12 | 82 |
central nervous system | 9.88e-12 | 81 |
bone marrow | 1.34e-11 | 76 |
regional part of nervous system | 1.03e-10 | 53 |
regional part of brain | 1.03e-10 | 53 |
regional part of forebrain | 1.81e-10 | 41 |
forebrain | 1.81e-10 | 41 |
anterior neural tube | 1.81e-10 | 41 |
future forebrain | 1.81e-10 | 41 |
brain | 1.85e-10 | 68 |
future brain | 1.85e-10 | 68 |
skeletal element | 2.24e-09 | 90 |
brain grey matter | 2.39e-09 | 34 |
gray matter | 2.39e-09 | 34 |
immune system | 2.56e-09 | 93 |
skeletal system | 4.50e-09 | 100 |
regional part of telencephalon | 1.07e-08 | 32 |
telencephalon | 1.85e-08 | 34 |
regional part of cerebral cortex | 2.94e-08 | 22 |
cerebral hemisphere | 3.71e-08 | 32 |
neocortex | 2.03e-07 | 20 |
blood | 2.41e-07 | 15 |
haemolymphatic fluid | 2.41e-07 | 15 |
organism substance | 2.41e-07 | 15 |