FFCP PHASE1:Hg19::chr9:130478382..130478396,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158248 | |EntrezGene=158248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26536 | |HGNC=26536 | ||
|TSSclassifier=strong | |||
|UniProt=B4DYG4,Q8NEE8 | |UniProt=B4DYG4,Q8NEE8 | ||
|association_with_transcript=24bp_to_ENST00000393748,NM_144965,uc004brq.1,uc011mai.1_5end | |association_with_transcript=24bp_to_ENST00000393748,NM_144965,uc004brq.1,uc011mai.1_5end | ||
|cluster_id=chr9:130478382..130478396,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TTC16_5end | |description=CAGE_peak_4_at_TTC16_5end | ||
|id=chr9:130478382..130478396,+ | |id=chr9:130478382..130478396,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0008947;6.10e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!8.51e-12!2;UBERON:0007023!1.21e-09!115;UBERON:0001896!3.55e-08!3;UBERON:0005290!3.55e-08!3;UBERON:0010096!3.55e-08!3;UBERON:0004733!2.33e-07!12;UBERON:0002028!2.33e-07!12;UBERON:0007277!2.33e-07!12;UBERON:0001301!6.80e-07!1;UBERON:0004732!8.51e-07!13 | |ontology_enrichment_uberon=UBERON:0000341!8.51e-12!2;UBERON:0007023!1.21e-09!115;UBERON:0001896!3.55e-08!3;UBERON:0005290!3.55e-08!3;UBERON:0010096!3.55e-08!3;UBERON:0004733!2.33e-07!12;UBERON:0002028!2.33e-07!12;UBERON:0007277!2.33e-07!12;UBERON:0001301!6.80e-07!1;UBERON:0004732!8.51e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0005178;1.93e-07;34!UBERON:0002224;1.93e-07;34!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002048;5.91e-07;22!UBERON:0000117;5.91e-07;22!UBERON:0000171;5.91e-07;22!UBERON:0000170;5.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0005178,1.93e-09,34;UBERON:0002224,1.93e-09,34;UBERON:0005181,3.43e-09,35;UBERON:0008947,1.60e-08,38;UBERON:0003258,1.60e-08,38;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002048,5.91e-07,22;UBERON:0000117,5.91e-07,22;UBERON:0000171,5.91e-07,22;UBERON:0000170,5.91e-07,22;UBERON:0005597,5.91e-07,22;UBERON:0000118,5.91e-07,22 | |||
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|short_description=p4@TTC16 | |short_description=p4@TTC16 | ||
}} | }} |
Latest revision as of 04:55, 25 September 2015
Short description: | p4@TTC16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTC16_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 24bp_to_ENST00000393748, NM_144965, uc004brq.1, uc011mai.1_5end |
EntrezGene: | TTC16 |
HGNC: | 26536 |
UniProt: | B4DYG4Q8NEE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
thoracic cavity element | 1.93e-09 | 34 |
thoracic cavity | 1.93e-09 | 34 |
thoracic segment organ | 3.43e-09 | 35 |
respiratory primordium | 1.60e-08 | 38 |
endoderm of foregut | 1.60e-08 | 38 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
lung | 5.91e-07 | 22 |
respiratory tube | 5.91e-07 | 22 |
respiration organ | 5.91e-07 | 22 |
pair of lungs | 5.91e-07 | 22 |
lung primordium | 5.91e-07 | 22 |
lung bud | 5.91e-07 | 22 |