FFCP PHASE1:Hg19::chr16:2213530..2213556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84231 | |EntrezGene=84231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20456 | |HGNC=20456 | ||
|TSSclassifier=strong | |||
|UniProt=Q6Q0C0 | |UniProt=Q6Q0C0 | ||
|association_with_transcript=-326bp_to_AL136921_5end | |association_with_transcript=-326bp_to_AL136921_5end | ||
|cluster_id=chr16:2213530..2213556,+ | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_7_at_TRAF7_5end | |description=CAGE_peak_7_at_TRAF7_5end | ||
|id=chr16:2213530..2213556,+ | |id=chr16:2213530..2213556,+ | ||
|ontology_enrichment_celltype=CL:0000082!3.85e-09!19;CL:0000066!5.73e-09!254 | |ontology_enrichment_celltype=CL:0000082!3.85e-09!19;CL:0000066!5.73e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.51e-20!106;DOID:1749!1.57e-17!14;DOID:0050615!5.60e-15!16;DOID:0050687!6.39e-14!143;DOID:1324!9.90e-12!15;DOID:3493!1.58e-11!2;DOID:3908!8.61e-10!5;DOID:3905!3.34e-09!9;DOID:162!3.53e-09!235;DOID:14566!7.12e-09!239;DOID:4556!1.28e-07!3;DOID:1325!3.27e-07!7;DOID:3904!3.27e-07!7;DOID:0050619!5.90e-07!1;DOID:1357!5.90e-07!1 | |ontology_enrichment_disease=DOID:305!1.51e-20!106;DOID:1749!1.57e-17!14;DOID:0050615!5.60e-15!16;DOID:0050687!6.39e-14!143;DOID:1324!9.90e-12!15;DOID:3493!1.58e-11!2;DOID:3908!8.61e-10!5;DOID:3905!3.34e-09!9;DOID:162!3.53e-09!235;DOID:14566!7.12e-09!239;DOID:4556!1.28e-07!3;DOID:1325!3.27e-07!7;DOID:3904!3.27e-07!7;DOID:0050619!5.90e-07!1;DOID:1357!5.90e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.55e-98;1!DOID:1357;2.55e-98;1!DOID:1749;1.86e-08;14!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.55e-98,1;DOID:1357,2.55e-98,1;DOID:1749,1.86e-08,14;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.52e-18!7;UBERON:0001173!3.52e-18!7;UBERON:0004912!3.52e-18!7;UBERON:0003343!1.27e-12!4;UBERON:0004785!1.27e-12!4;UBERON:0002394!4.74e-12!4;UBERON:0003928!4.74e-12!4;UBERON:0001007!4.11e-11!155;UBERON:0001555!4.11e-11!155;UBERON:0007026!4.11e-11!155;UBERON:0004119!5.57e-11!169;UBERON:0000925!5.57e-11!169;UBERON:0006595!5.57e-11!169;UBERON:0003729!3.42e-10!5;UBERON:0004802!3.85e-09!19;UBERON:0000115!3.85e-09!19;UBERON:0000077!7.56e-09!130;UBERON:0000974!1.16e-08!10;UBERON:0001004!5.53e-08!72;UBERON:0002110!7.14e-08!3;UBERON:0006242!7.14e-08!3;UBERON:0002048!8.14e-08!22;UBERON:0000117!8.14e-08!22;UBERON:0000171!8.14e-08!22;UBERON:0000170!8.14e-08!22;UBERON:0005597!8.14e-08!22;UBERON:0000118!8.14e-08!22;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0001041!2.34e-07!98;UBERON:0000466!5.10e-07!126;UBERON:0001764!5.90e-07!1;UBERON:0001825!5.90e-07!1;UBERON:0001736!8.21e-07!1;UBERON:0006298!8.21e-07!1 | |ontology_enrichment_uberon=UBERON:0002294!3.52e-18!7;UBERON:0001173!3.52e-18!7;UBERON:0004912!3.52e-18!7;UBERON:0003343!1.27e-12!4;UBERON:0004785!1.27e-12!4;UBERON:0002394!4.74e-12!4;UBERON:0003928!4.74e-12!4;UBERON:0001007!4.11e-11!155;UBERON:0001555!4.11e-11!155;UBERON:0007026!4.11e-11!155;UBERON:0004119!5.57e-11!169;UBERON:0000925!5.57e-11!169;UBERON:0006595!5.57e-11!169;UBERON:0003729!3.42e-10!5;UBERON:0004802!3.85e-09!19;UBERON:0000115!3.85e-09!19;UBERON:0000077!7.56e-09!130;UBERON:0000974!1.16e-08!10;UBERON:0001004!5.53e-08!72;UBERON:0002110!7.14e-08!3;UBERON:0006242!7.14e-08!3;UBERON:0002048!8.14e-08!22;UBERON:0000117!8.14e-08!22;UBERON:0000171!8.14e-08!22;UBERON:0000170!8.14e-08!22;UBERON:0005597!8.14e-08!22;UBERON:0000118!8.14e-08!22;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0001041!2.34e-07!98;UBERON:0000466!5.10e-07!126;UBERON:0001764!5.90e-07!1;UBERON:0001825!5.90e-07!1;UBERON:0001736!8.21e-07!1;UBERON:0006298!8.21e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.55e-98;1!UBERON:0001825;2.55e-98;1!UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0003729;5.28e-09;13!UBERON:0000033;8.24e-08;50!UBERON:0000153;1.93e-07;54!UBERON:0001004;3.39e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.55e-98,1;UBERON:0001825,2.55e-98,1;UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0000974,2.73e-11,10;UBERON:0003729,5.28e-09,13;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94443155503077,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.687051635306701,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94443155503077,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.687051635306701,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@TRAF7 | |short_description=p7@TRAF7 | ||
}} | }} |
Latest revision as of 04:39, 25 September 2015
Short description: | p7@TRAF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRAF7_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | -326bp_to_AL136921_5end |
EntrezGene: | TRAF7 |
HGNC: | 20456 |
UniProt: | Q6Q0C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.55e-98 | 1 |
paranasal sinus | 2.55e-98 | 1 |
mucosa of oral region | 5.56e-26 | 4 |
respiratory system mucosa | 5.56e-26 | 4 |
neck | 2.73e-11 | 10 |
mouth mucosa | 5.28e-09 | 13 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.55e-98 | 1 |
maxillary sinus cancer | 2.55e-98 | 1 |
squamous cell carcinoma | 1.86e-08 | 14 |
respiratory system cancer | 1.54e-07 | 16 |