FFCP PHASE1:Hg19::chr19:1132207..1132243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22904 | |EntrezGene=22904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29158 | |HGNC=29158 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G9 | |UniProt=Q9Y2G9 | ||
|association_with_transcript=29bp_to_ENST00000438103,NM_001100122,uc002lrj.3,uc010dsf.2,uc010xgj.1_5end | |association_with_transcript=29bp_to_ENST00000438103,NM_001100122,uc002lrj.3,uc010dsf.2,uc010xgj.1_5end | ||
|cluster_id=chr19:1132207..1132243,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_2_at_SBNO2_5end | |description=CAGE_peak_2_at_SBNO2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.52e-15!42;CL:0002371!3.17e-14!591;CL:0000766!1.04e-12!76;CL:0002009!1.71e-12!65;CL:0000860!2.40e-12!45;CL:0002194!5.60e-12!63;CL:0000576!5.60e-12!63;CL:0000040!5.60e-12!63;CL:0000559!5.60e-12!63;CL:0000144!5.10e-10!625;CL:0000557!7.48e-10!71;CL:0000839!8.89e-09!70;CL:0000048!1.43e-08!430;CL:0000359!2.33e-08!32;CL:0000222!4.19e-08!119;CL:0000723!5.67e-08!436;CL:0000183!8.77e-08!59;CL:0000738!1.47e-07!140;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000187!3.06e-07!54;CL:0000192!4.12e-07!42;CL:0000514!4.12e-07!42;CL:0000034!4.96e-07!444;CL:0002087!6.73e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.52e-15!42;CL:0002371!3.17e-14!591;CL:0000766!1.04e-12!76;CL:0002009!1.71e-12!65;CL:0000860!2.40e-12!45;CL:0002194!5.60e-12!63;CL:0000576!5.60e-12!63;CL:0000040!5.60e-12!63;CL:0000559!5.60e-12!63;CL:0000144!5.10e-10!625;CL:0000557!7.48e-10!71;CL:0000839!8.89e-09!70;CL:0000048!1.43e-08!430;CL:0000359!2.33e-08!32;CL:0000222!4.19e-08!119;CL:0000723!5.67e-08!436;CL:0000183!8.77e-08!59;CL:0000738!1.47e-07!140;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000187!3.06e-07!54;CL:0000192!4.12e-07!42;CL:0000514!4.12e-07!42;CL:0000034!4.96e-07!444;CL:0002087!6.73e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-15;33!CL:0002057;3.25e-15;33!CL:0000473;7.21e-13;39!CL:0000234;7.21e-13;39!CL:0000576;1.70e-08;48!CL:0000359;6.38e-08;32!CL:0000766;7.76e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;3.25e-15;33!CL:0002057;3.25e-15;33!CL:0000473;7.21e-13;39!CL:0000234;7.21e-13;39!CL:0000576;1.70e-08;48!CL:0000359;6.38e-08;32!CL:0000766;7.76e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.43e-16,48;CL:0000234,4.43e-16,48;CL:0000860,1.28e-15,42;CL:0002057,1.28e-15,42;CL:0002009,6.79e-15,61;CL:0000766,1.11e-14,72;CL:0002194,2.34e-14,59;CL:0000576,2.34e-14,59;CL:0000040,2.34e-14,59;CL:0000559,2.34e-14,59;CL:0000557,1.26e-11,67;CL:0000839,1.76e-10,66;CL:0000048,3.90e-09,427;CL:0000723,1.46e-08,433;CL:0000359,2.15e-08,32;CL:0000738,2.33e-08,136;CL:0000222,2.57e-08,121;CL:0002087,8.32e-08,115;CL:0000034,1.58e-07,441;CL:0000680,1.95e-07,58;CL:0000056,1.95e-07,58;CL:0000355,1.95e-07,58;CL:0000187,3.14e-07,55;CL:0000192,4.43e-07,43;CL:0000514,4.43e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;5.49e-12;42 | |ontology_enrichment_development_v019=CL:0002057;5.49e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.66e-29!216;UBERON:0001009!1.82e-19!113;UBERON:0004535!2.09e-19!110;UBERON:0002193!8.16e-18!112;UBERON:0002204!7.01e-17!167;UBERON:0002390!5.61e-16!102;UBERON:0003061!5.61e-16!102;UBERON:0000055!5.46e-14!69;UBERON:0002049!4.84e-13!79;UBERON:0007798!4.84e-13!79;UBERON:0001981!1.19e-12!60;UBERON:0007500!1.19e-12!60;UBERON:0004537!1.19e-12!60;UBERON:0006965!1.19e-12!60;UBERON:0004872!3.44e-12!84;UBERON:0001637!8.60e-12!42;UBERON:0003509!8.60e-12!42;UBERON:0004572!8.60e-12!42;UBERON:0002371!3.15e-11!80;UBERON:0001474!5.99e-10!86;UBERON:0004765!9.73e-10!101;UBERON:0001434!9.73e-10!101;UBERON:0003914!1.07e-09!118;UBERON:0004573!3.87e-09!33;UBERON:0004571!3.87e-09!33;UBERON:0000926!1.27e-08!448;UBERON:0004120!1.27e-08!448;UBERON:0006603!1.27e-08!448;UBERON:0002405!2.00e-08!115;UBERON:0000486!3.95e-08!82;UBERON:0000178!2.64e-07!15;UBERON:0000179!2.64e-07!15;UBERON:0000463!2.64e-07!15;UBERON:0000480!2.76e-07!626;UBERON:0000467!4.97e-07!625;UBERON:0000914!9.60e-07!83;UBERON:0002329!9.60e-07!83;UBERON:0003077!9.60e-07!83;UBERON:0003059!9.60e-07!83;UBERON:0007282!9.60e-07!83;UBERON:0009618!9.60e-07!83;UBERON:0007285!9.60e-07!83 | |ontology_enrichment_uberon=UBERON:0003081!1.66e-29!216;UBERON:0001009!1.82e-19!113;UBERON:0004535!2.09e-19!110;UBERON:0002193!8.16e-18!112;UBERON:0002204!7.01e-17!167;UBERON:0002390!5.61e-16!102;UBERON:0003061!5.61e-16!102;UBERON:0000055!5.46e-14!69;UBERON:0002049!4.84e-13!79;UBERON:0007798!4.84e-13!79;UBERON:0001981!1.19e-12!60;UBERON:0007500!1.19e-12!60;UBERON:0004537!1.19e-12!60;UBERON:0006965!1.19e-12!60;UBERON:0004872!3.44e-12!84;UBERON:0001637!8.60e-12!42;UBERON:0003509!8.60e-12!42;UBERON:0004572!8.60e-12!42;UBERON:0002371!3.15e-11!80;UBERON:0001474!5.99e-10!86;UBERON:0004765!9.73e-10!101;UBERON:0001434!9.73e-10!101;UBERON:0003914!1.07e-09!118;UBERON:0004573!3.87e-09!33;UBERON:0004571!3.87e-09!33;UBERON:0000926!1.27e-08!448;UBERON:0004120!1.27e-08!448;UBERON:0006603!1.27e-08!448;UBERON:0002405!2.00e-08!115;UBERON:0000486!3.95e-08!82;UBERON:0000178!2.64e-07!15;UBERON:0000179!2.64e-07!15;UBERON:0000463!2.64e-07!15;UBERON:0000480!2.76e-07!626;UBERON:0000467!4.97e-07!625;UBERON:0000914!9.60e-07!83;UBERON:0002329!9.60e-07!83;UBERON:0003077!9.60e-07!83;UBERON:0003059!9.60e-07!83;UBERON:0007282!9.60e-07!83;UBERON:0009618!9.60e-07!83;UBERON:0007285!9.60e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0004573;1.84e-08;33!UBERON:0004571;1.84e-08;33!UBERON:0000055;2.50e-07;65!UBERON:0000178;2.79e-07;15!UBERON:0000179;2.79e-07;15!UBERON:0000463;2.79e-07;15!UBERON:0003914;4.28e-07;74!UBERON:0007500;5.57e-07;56!UBERON:0001981;5.57e-07;56!UBERON:0004537;5.57e-07;56!UBERON:0002390;9.83e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0004573;1.84e-08;33!UBERON:0004571;1.84e-08;33!UBERON:0000055;2.50e-07;65!UBERON:0000178;2.79e-07;15!UBERON:0000179;2.79e-07;15!UBERON:0000463;2.79e-07;15!UBERON:0003914;4.28e-07;74!UBERON:0007500;5.57e-07;56!UBERON:0001981;5.57e-07;56!UBERON:0004537;5.57e-07;56!UBERON:0002390;9.83e-07;32 | ||
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| ||
|short_description=p2@SBNO2 | |short_description=p2@SBNO2 | ||
}} | }} |
Latest revision as of 04:37, 25 September 2015
Short description: | p2@SBNO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SBNO2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 29bp_to_ENST00000438103, NM_001100122, uc002lrj.3, uc010dsf.2, uc010xgj.1_5end |
EntrezGene: | SBNO2 |
HGNC: | 29158 |
UniProt: | Q9Y2G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.43e-16 | 48 |
phagocyte | 4.43e-16 | 48 |
classical monocyte | 1.28e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-15 | 42 |
macrophage dendritic cell progenitor | 6.79e-15 | 61 |
myeloid leukocyte | 1.11e-14 | 72 |
monopoietic cell | 2.34e-14 | 59 |
monocyte | 2.34e-14 | 59 |
monoblast | 2.34e-14 | 59 |
promonocyte | 2.34e-14 | 59 |
granulocyte monocyte progenitor cell | 1.26e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.76e-10 | 66 |
multi fate stem cell | 3.90e-09 | 427 |
somatic stem cell | 1.46e-08 | 433 |
vascular associated smooth muscle cell | 2.15e-08 | 32 |
leukocyte | 2.33e-08 | 136 |
mesodermal cell | 2.57e-08 | 121 |
nongranular leukocyte | 8.32e-08 | 115 |
stem cell | 1.58e-07 | 441 |
muscle precursor cell | 1.95e-07 | 58 |
myoblast | 1.95e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-07 | 58 |
muscle cell | 3.14e-07 | 55 |
smooth muscle cell | 4.43e-07 | 43 |
smooth muscle myoblast | 4.43e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.53e-28 | 203 |
hemolymphoid system | 8.73e-20 | 108 |
circulatory system | 2.87e-19 | 112 |
cardiovascular system | 3.31e-19 | 109 |
musculoskeletal system | 3.54e-19 | 167 |
mesoderm | 1.29e-18 | 315 |
mesoderm-derived structure | 1.29e-18 | 315 |
presumptive mesoderm | 1.29e-18 | 315 |
hematopoietic system | 5.07e-18 | 98 |
blood island | 5.07e-18 | 98 |
immune system | 2.68e-14 | 93 |
vessel | 8.96e-14 | 68 |
skeletal element | 3.98e-13 | 90 |
bone marrow | 4.31e-13 | 76 |
vasculature | 7.86e-13 | 78 |
vascular system | 7.86e-13 | 78 |
epithelial tube open at both ends | 1.53e-12 | 59 |
blood vessel | 1.53e-12 | 59 |
blood vasculature | 1.53e-12 | 59 |
vascular cord | 1.53e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 5.53e-12 | 83 |
skeletal system | 6.53e-12 | 100 |
artery | 7.60e-12 | 42 |
arterial blood vessel | 7.60e-12 | 42 |
arterial system | 7.60e-12 | 42 |
bone element | 1.56e-11 | 82 |
epithelial tube | 5.27e-10 | 117 |
systemic artery | 3.53e-09 | 33 |
systemic arterial system | 3.53e-09 | 33 |
multilaminar epithelium | 4.50e-08 | 83 |
epithelial vesicle | 5.80e-08 | 78 |
blood | 2.46e-07 | 15 |
haemolymphatic fluid | 2.46e-07 | 15 |
organism substance | 2.46e-07 | 15 |