FFCP PHASE1:Hg19::chr1:218519642..218519668,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:218519642..218519668,+
|short_description=p3@TGFB2
|description=CAGE_peak_3_at_TGFB2_5end
|association_with_transcript=65bp_to_ENST00000366929,ENST00000366...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt=P61812 | |UniProt=P61812 | ||
|association_with_transcript=65bp_to_ENST00000366929,ENST00000366930_5end | |||
|cluster_id=chr1:218519642..218519668,+ | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_3_at_TGFB2_5end | |||
|id=chr1:218519642..218519668,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.21e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.77e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.75e-10,32;CL:0000192,4.20e-07,43;CL:0000514,4.20e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!9.93e-31!286;UBERON:0000033!4.04e-29!123;UBERON:0005743!4.76e-28!86;UBERON:0004111!8.69e-28!241;UBERON:0000153!2.54e-27!129;UBERON:0007811!2.54e-27!129;UBERON:0004121!3.50e-27!169;UBERON:0001017!7.64e-27!82;UBERON:0000481!1.08e-26!347;UBERON:0000119!3.02e-26!312;UBERON:0000073!5.91e-26!94;UBERON:0001016!5.91e-26!94;UBERON:0000924!8.43e-26!173;UBERON:0006601!8.43e-26!173;UBERON:0003075!1.11e-25!86;UBERON:0007284!1.11e-25!86;UBERON:0000955!1.28e-25!69;UBERON:0006238!1.28e-25!69;UBERON:0000483!5.03e-25!309;UBERON:0002616!1.49e-24!59;UBERON:0001049!9.20e-24!57;UBERON:0005068!9.20e-24!57;UBERON:0006241!9.20e-24!57;UBERON:0007135!9.20e-24!57;UBERON:0002346!1.47e-23!90;UBERON:0000475!2.63e-23!365;UBERON:0000025!1.09e-22!194;UBERON:0000468!3.50e-19!659;UBERON:0003056!3.70e-19!61;UBERON:0002780!9.40e-18!41;UBERON:0001890!9.40e-18!41;UBERON:0006240!9.40e-18!41;UBERON:0003080!1.34e-17!42;UBERON:0007023!2.02e-17!115;UBERON:0000467!2.45e-17!625;UBERON:0000480!4.60e-17!626;UBERON:0002020!1.96e-16!34;UBERON:0003528!1.96e-16!34;UBERON:0002050!2.73e-16!605;UBERON:0005423!2.73e-16!605;UBERON:0001893!3.21e-16!34;UBERON:0000922!3.56e-16!612;UBERON:0000923!5.82e-16!604;UBERON:0005291!5.82e-16!604;UBERON:0006598!5.82e-16!604;UBERON:0002532!5.82e-16!604;UBERON:0002791!6.95e-16!33;UBERON:0001869!1.34e-15!32;UBERON:0000956!7.14e-13!25;UBERON:0000203!7.14e-13!25;UBERON:0000064!1.11e-12!219;UBERON:0002619!1.54e-11!22;UBERON:0000062!1.15e-10!511;UBERON:0001950!1.69e-10!20;UBERON:0002049!8.76e-10!79;UBERON:0007798!8.76e-10!79;UBERON:0004535!2.05e-08!110;UBERON:0001009!2.62e-08!113;UBERON:0003076!2.27e-07!15;UBERON:0003057!2.27e-07!15;UBERON:0001637!4.89e-07!42;UBERON:0003509!4.89e-07!42;UBERON:0004572!4.89e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.84e-16;34!UBERON:0003528;9.29e-16;34!UBERON:0002020;9.29e-16;34!UBERON:0001869;9.40e-16;32!UBERON:0002791;1.63e-15;32!UBERON:0002780;3.18e-14;41!UBERON:0001890;3.18e-14;41!UBERON:0000956;5.17e-14;25!UBERON:0000203;5.17e-14;25!UBERON:0000073;1.00e-13;53!UBERON:0002616;1.00e-13;53!UBERON:0001017;9.76e-13;75!UBERON:0002619;1.67e-12;22!UBERON:0000955;3.13e-12;68!UBERON:0001950;2.34e-11;20!UBERON:0001016;3.11e-10;83!UBERON:0007625;3.29e-07;11!UBERON:0006876;8.71e-07;11 | |||
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| ||
|short_description=p3@TGFB2 | |||
}} | }} |
Latest revision as of 04:36, 25 September 2015
Short description: | p3@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | 65bp_to_ENST00000366929, ENST00000366930_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.75e-10 | 32 |
smooth muscle cell | 4.20e-07 | 43 |
smooth muscle myoblast | 4.20e-07 | 43 |