FFCP PHASE1:Hg19::chr1:100818009..100818072,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:100818009..100818072,+ to FFCP PHASE1:Hg19::chr1:100818009..100818072,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8556 | |EntrezGene=8556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1718 | |HGNC=1718 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EF4,Q9UNH5,Q52LH9 | |UniProt=Q59EF4,Q9UNH5,Q52LH9 | ||
|association_with_transcript=0bp_to_ENST00000361544,ENST00000370124,ENST00000370125,NM_003672,NM_033312,NM_033313,uc001dte.3,uc001dtf.2,uc001dtg.3,uc009wec.1,uc009wed.1,uc009wee.2_5end | |||
|cluster_id=chr1:100818009..100818072,+ | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_1_at_CDC14A_5end | |||
|id=chr1:100818009..100818072,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-45!172;CL:0000566!1.45e-45!172;CL:0000988!2.36e-43!182;CL:0002032!1.21e-41!165;CL:0000837!1.21e-41!165;CL:0000738!4.15e-38!140;CL:0002031!3.04e-29!124;CL:0002087!6.56e-27!119;CL:0000763!4.40e-25!112;CL:0000049!4.40e-25!112;CL:0000766!3.73e-17!76;CL:0000542!6.54e-15!53;CL:0000051!6.54e-15!53;CL:0000838!7.68e-15!52;CL:0000557!1.22e-14!71;CL:0002057!2.70e-14!42;CL:0000839!1.33e-13!70;CL:0000860!1.41e-12!45;CL:0000791!1.44e-12!18;CL:0000789!1.44e-12!18;CL:0002420!1.44e-12!18;CL:0002419!1.44e-12!18;CL:0000790!1.44e-12!18;CL:0002009!9.10e-12!65;CL:0002194!5.75e-11!63;CL:0000576!5.75e-11!63;CL:0000040!5.75e-11!63;CL:0000559!5.75e-11!63;CL:0000084!5.52e-10!25;CL:0000827!5.52e-10!25;CL:0000625!2.04e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-12;18!CL:0000789;1.19e-12;18!CL:0002419;1.19e-12;18!CL:0000576;2.40e-10;48!CL:0002087;4.00e-10;104!CL:0000084;5.48e-10;25!CL:0000860;6.97e-10;33!CL:0002057;6.97e-10;33!CL:0000542;3.53e-09;53!CL:0000766;3.83e-09;69!CL:0000738;6.89e-09;136!CL:0000625;1.82e-08;11!CL:0000763;2.22e-08;100!CL:0000988;3.02e-08;177!CL:0000473;7.94e-07;39!CL:0000234;7.94e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.31e-48,168;CL:0000988,8.69e-46,177;CL:0002032,6.25e-44,161;CL:0000837,6.25e-44,161;CL:0000738,1.57e-40,136;CL:0002031,1.96e-31,120;CL:0002087,4.89e-29,115;CL:0000763,3.19e-27,108;CL:0000049,3.19e-27,108;CL:0000766,2.64e-19,72;CL:0000557,1.20e-16,67;CL:0000839,1.59e-15,66;CL:0000542,6.77e-15,53;CL:0000051,6.77e-15,53;CL:0000838,7.96e-15,52;CL:0000860,2.64e-14,42;CL:0002057,2.64e-14,42;CL:0002009,1.38e-13,61;CL:0002194,9.86e-13,59;CL:0000576,9.86e-13,59;CL:0000040,9.86e-13,59;CL:0000559,9.86e-13,59;CL:0000791,1.41e-12,18;CL:0000789,1.41e-12,18;CL:0002420,1.41e-12,18;CL:0002419,1.41e-12,18;CL:0000790,1.41e-12,18;CL:0000473,8.58e-12,48;CL:0000234,8.58e-12,48;CL:0000084,5.82e-10,25;CL:0000827,5.82e-10,25;CL:0000625,2.01e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-12;18!CL:0002057;1.50e-10;42!CL:0000051;3.53e-09;53!CL:0000049;8.27e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!3.50e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.46e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.08e-19!112;UBERON:0002390!2.21e-19!102;UBERON:0003061!2.21e-19!102;UBERON:0007023!1.34e-12!115;UBERON:0002371!2.91e-11!80;UBERON:0001474!2.94e-11!86;UBERON:0002405!2.02e-09!115;UBERON:0000178!1.14e-08!15;UBERON:0000179!1.14e-08!15;UBERON:0000463!1.14e-08!15;UBERON:0004765!2.81e-07!101;UBERON:0001434!2.81e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.81e-09;15!UBERON:0000179;9.81e-09;15!UBERON:0000463;9.81e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.75e-21,108;UBERON:0002390,2.84e-21,98;UBERON:0003061,2.84e-21,98;UBERON:0002405,5.23e-15,93;UBERON:0002371,8.95e-13,76;UBERON:0001474,1.07e-12,82;UBERON:0007023,2.25e-12,114;UBERON:0004765,7.33e-09,90;UBERON:0000178,1.13e-08,15;UBERON:0000179,1.13e-08,15;UBERON:0000463,1.13e-08,15;UBERON:0001434,3.84e-07,100 | |||
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| ||
|short_description=p1@CDC14A | |||
}} | }} |
Latest revision as of 04:26, 25 September 2015
Short description: | p1@CDC14A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC14A_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 0bp_to_ENST00000361544, ENST00000370124, ENST00000370125, NM_003672, NM_033312, NM_033313, uc001dte.3, uc001dtf.2, uc001dtg.3, uc009wec.1, uc009wed.1, uc009wee.2_5end |
EntrezGene: | CDC14A |
HGNC: | 1718 |
UniProt: | Q59EF4Q9UNH5Q52LH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.75e-21 | 108 |
hematopoietic system | 2.84e-21 | 98 |
blood island | 2.84e-21 | 98 |
immune system | 5.23e-15 | 93 |
bone marrow | 8.95e-13 | 76 |
bone element | 1.07e-12 | 82 |
adult organism | 2.25e-12 | 114 |
skeletal element | 7.33e-09 | 90 |
blood | 1.13e-08 | 15 |
haemolymphatic fluid | 1.13e-08 | 15 |
organism substance | 1.13e-08 | 15 |
skeletal system | 3.84e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.46e-07 | 39 |