FFCP PHASE1:Hg19::chr1:21835908..21835926,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:21835908..21835926,+ to FFCP PHASE1:Hg19::chr1:21835908..21835926,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=249 | |EntrezGene=249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=438 | |HGNC=438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000468526_5end | |||
|cluster_id=chr1:21835908..21835926,+ | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_1_at_ALPL_5end | |||
|id=chr1:21835908..21835926,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.53e-36!115;UBERON:0002616!5.31e-20!59;UBERON:0001049!7.30e-19!57;UBERON:0005068!7.30e-19!57;UBERON:0006241!7.30e-19!57;UBERON:0007135!7.30e-19!57;UBERON:0001017!5.53e-17!82;UBERON:0005743!1.49e-16!86;UBERON:0000073!2.34e-16!94;UBERON:0001016!2.34e-16!94;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0003080!3.09e-13!42;UBERON:0002346!5.24e-13!90;UBERON:0002780!8.56e-13!41;UBERON:0001890!8.56e-13!41;UBERON:0006240!8.56e-13!41;UBERON:0003075!1.00e-12!86;UBERON:0007284!1.00e-12!86;UBERON:0002020!5.23e-11!34;UBERON:0003528!5.23e-11!34;UBERON:0001893!7.11e-11!34;UBERON:0002791!1.61e-10!33;UBERON:0001869!2.82e-10!32;UBERON:0000956!2.80e-08!25;UBERON:0000203!2.80e-08!25;UBERON:0000479!3.86e-08!787;UBERON:0003056!1.36e-07!61;UBERON:0002619!1.57e-07!22;UBERON:0000033!2.84e-07!123;UBERON:0000153!3.73e-07!129;UBERON:0007811!3.73e-07!129;UBERON:0000468!4.79e-07!659;UBERON:0000922!4.85e-07!612;UBERON:0003076!5.55e-07!15;UBERON:0003057!5.55e-07!15;UBERON:0001950!9.17e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.55e-11;53!UBERON:0002616;1.55e-11;53!UBERON:0001893;4.90e-11;34!UBERON:0003528;4.94e-11;34!UBERON:0002020;4.94e-11;34!UBERON:0001869;8.72e-11;32!UBERON:0002780;1.00e-10;41!UBERON:0001890;1.00e-10;41!UBERON:0002791;1.02e-10;32!UBERON:0007023;1.74e-10;114!UBERON:0000956;1.97e-09;25!UBERON:0000203;1.97e-09;25!UBERON:0002619;1.41e-08;22!UBERON:0000955;1.56e-08;68!UBERON:0001017;5.54e-08;75!UBERON:0001950;1.12e-07;20!UBERON:0001013;2.71e-07;14!UBERON:0004732;3.87e-07;13!UBERON:0001016;6.90e-07;83!UBERON:0004733;9.31e-07;12!UBERON:0002028;9.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.51e-40,114;UBERON:0001049,4.29e-21,56;UBERON:0005068,4.29e-21,56;UBERON:0006241,4.29e-21,56;UBERON:0007135,4.29e-21,56;UBERON:0000073,6.49e-20,53;UBERON:0002616,6.49e-20,53;UBERON:0001017,1.05e-19,81;UBERON:0001016,3.55e-19,89;UBERON:0000955,4.07e-18,68;UBERON:0006238,4.07e-18,68;UBERON:0002780,1.38e-14,41;UBERON:0001890,1.38e-14,41;UBERON:0003080,1.38e-14,41;UBERON:0006240,1.38e-14,41;UBERON:0003075,1.48e-13,82;UBERON:0007284,1.48e-13,82;UBERON:0002346,2.75e-13,86;UBERON:0003528,1.63e-12,34;UBERON:0002020,1.63e-12,34;UBERON:0001893,2.32e-12,34;UBERON:0001869,1.15e-11,32;UBERON:0002791,1.32e-11,32;UBERON:0010314,9.07e-11,132;UBERON:0011216,6.70e-10,223;UBERON:0010371,1.88e-09,104;UBERON:0000479,2.18e-09,773;UBERON:0000956,2.36e-09,25;UBERON:0000203,2.36e-09,25;UBERON:0002619,1.74e-08,22;UBERON:0003076,7.48e-08,15;UBERON:0003057,7.48e-08,15;UBERON:0001950,1.34e-07,20;UBERON:0001013,2.11e-07,14;UBERON:0003056,2.75e-07,61;UBERON:0004732,3.97e-07,13;UBERON:0004121,4.36e-07,171;UBERON:0000924,4.36e-07,171;UBERON:0006601,4.36e-07,171;UBERON:0004733,9.48e-07,12;UBERON:0002028,9.48e-07,12;UBERON:0007277,9.48e-07,12 | |||
|phase1_expression=11.4457378940451,32.1150785836475,8.3163098416623,5.00366491765652,9.38618298297304,1.74467704820074,48.126976851979,68.8574662035246,62.4233651397614,0,0.697801167972428,0,0,1.60896258848061,2.65117900582333,2.01697543935533,0.602694528023977,0,0.487932798790507,23.6392431507433,8.16002764977012,32.9127457551992,4.29353980696585,3.83248390204076,32.2644583758643,1.06978768047132,0.903106483949403,0.944529375764151,0,0,0.309632246632152,0,0,0,5.81004004352262,0,0,0,0,0,0,0,0,1.59938062657521,0,3.63876091781724,0.929716147622738,0.822335776043652,3.40677007984614,2.8769239232215,0.768482119587302,3.78371567821736,1.72372840368309,0.645484683583826,4.06279459783025,0.752969358170419,0.545812300115692,1.79778787556068,1.22433556948361,1.28371610830437,4.47535988059329,1.31940520074686,0.997318288108159,4.26224750532694,1.7412554317715,0,3.11411124497787,3.26623264833766,1.0429658368404,4.77815458351257,3.02699751316684,1.47311054395026,3.48108626184973,0,0,0,0,0,0,0,0,0.182664153764634,0,2.18455444504853,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,2.86216126360609,0.569212969109448,2.93618594685469,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.255973222308837,4.99722906209383,4.02521328474829,0,0,0,0,85.3324032098866,6.70700859703636,0.383587685530591,5.42158728576849,11.0294340339896,5.21447468258965,0,2.43317435151318,0.378139268656271,0.221729397462564,0.087834785693126,22.8558486743509,0,0,0.649094787309367,0.696518949197069,1.06366368415092,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0.367663080345869,0,0,0,0,0,0,0,86.9750755078017,178.37892150823,0,18.3879622127268,0,0.132409180813219,6.88407889797153,5.32002573297536,1.12135520028461,0,0.49333509683432,3.42332138939743,1.21239604862719,0.817309515567294,62.9646899002915,16.70910180992,0.234321431833797,0,0,0,0.117434498643765,2.42809416552197,1.26405726032024,0,0,1.23990937410919,9.50402285825643,2.22540236350701,1.82032272387605,5.03032699271367,0,0.375355559615893,0.277064115484183,2.19488810440419,0,3.45547535485173,0.907457465280168,0.538168907066586,4.91181994282705,11.6562545637759,0,0,0.772921620136887,0.18611685633159,0,0,0,0.644349290496095,0.80823028409406,0,0,1.3564847384839,0,0,0,54.4002729337995,64.9395864775278,59.0265229777153,35.6594029252874,82.7612390872061,61.6811736838153,81.3537568115043,29.5890831568727,0,21.825292617503,31.0408177117922,0,0,0,0,0,0,0,0,0,0,26.6459370226547,0.4115740113314,0,2.53510069643662,7.86261773342101,15.3605375737165,0,0.245976877086227,0.171567810298526,0,0,0,0,2.6064664424826,0,0,0.579652024875384,0,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0,0,0,6.84289784090821,0,0,0,3.36393253036082,0.43596006883328,1.68678057388185,1.16344544182,67.9547247118577,1.690605505112,0,0,6.17297698229141,4.25547396069835,1.5985330740966,2.43062589218851,3.7983512377401,1.64648067356154,3.90883421152482,2.48774364119782,0,0,0,0.099972991182057,0,0,2.10833939483032,1.4377491329495,8.04033550838797,25.6746429073293,92.9495988805859,24.8626350285964,177.628475533976,0,0,0,0,0,0,1.54657762555539,0.670065061337395,0,179.012678723377,308.136302980146,741.389353537067,2.4538298343828,1.00034104211935,7.32415563989286,0.831883446123229,0.713715955188647,0.157702415033935,0,212.768892507497,27.2889004867182,23.7988063972761,3.32112799267718,26.9178986070887,0.347534457872331,217.730887098568,28.1377607524902,0,2.37285620900479,0.106727557803444,0.303127571446259,0,0,3.47350930946288,1.84154367945675,2.24528075546459,0.640695746278505,1.02341449813341,2.2519548960105,10.3892646511494,6.16838775210622,52.3807089673725,4.59912073677331,0.519254429183621,10.5751444398563,0.120859449591622,0.200506470303285,0,10.9073725756376,107.980062627983,73.1674235473587,0,0,0.784349769176855,0,0.105551628892876,0,0,0.863663664408557,0,0.541892875087706,3.51182841698397,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0.328014645699706,0,27.099786063351,1884.40801649669,1520.81510253628,0,0,3.21367859688319,14.2105955889419,18.9479799051013,38.8364297057108,35.2861625560398,13.8572115880073,9.1360517165964,10.3976485447643,112.447461021829,0,0.192190067365106,0,0,0,1.25924938732256,0,0,11.7107326669745,0,0,0.286249773483982,58.4288639894678,5.06207079549961,16.0129362896013,98.0088540722409,14.5499255931533,0.636406495851874,0,26.8009961799139,4.39259247577688,6.59749453135844,11.524401449679,0,2.94880919367287,0.48763373908959,0.974853958525138,0,7.09799539321526,0.565621727814851,1.13008116620243,0,0,0,12.7330617538671,5.9030527684197,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0.7133421029625,2.12856638442359,0.211107635297664,2.63435914367922,0.379473173765715,0.699869440489966,0,0,0,29.6552972446854,0,0,0,0,102.504417064898,122.34195314278,1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|short_description=p1@ALPL | |||
}} | }} |
Latest revision as of 04:26, 25 September 2015
Short description: | p1@ALPL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALPL_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | 18bp_to_ENST00000468526_5end |
EntrezGene: | ALPL |
HGNC: | 438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data