FFCP PHASE1:Hg19::chr12:861717..861770,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:861717..861770,+
|short_description=p1@WNK1
|description=CAGE_peak_1_at_WNK1_5end
|association_with_transcript=0bp_to_ENST00000535572_5end
|EntrezGene=65...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65125 | |EntrezGene=65125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14540 | |HGNC=14540 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWT4 | |UniProt=F5GWT4 | ||
|association_with_transcript=0bp_to_ENST00000535572_5end | |||
|cluster_id=chr12:861717..861770,+ | |||
|coexpression_cluster_id=C1600 | |||
|description=CAGE_peak_1_at_WNK1_5end | |||
|id=chr12:861717..861770,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-45!115;UBERON:0001049!7.51e-24!57;UBERON:0005068!7.51e-24!57;UBERON:0006241!7.51e-24!57;UBERON:0007135!7.51e-24!57;UBERON:0003080!4.17e-19!42;UBERON:0002616!8.37e-19!59;UBERON:0002780!1.78e-18!41;UBERON:0001890!1.78e-18!41;UBERON:0006240!1.78e-18!41;UBERON:0001017!2.38e-16!82;UBERON:0000955!5.96e-16!69;UBERON:0006238!5.96e-16!69;UBERON:0002020!9.19e-16!34;UBERON:0003528!9.19e-16!34;UBERON:0001893!1.54e-15!34;UBERON:0002791!3.75e-15!33;UBERON:0005743!9.84e-15!86;UBERON:0001869!2.67e-14!32;UBERON:0000073!1.32e-13!94;UBERON:0001016!1.32e-13!94;UBERON:0003075!1.67e-13!86;UBERON:0007284!1.67e-13!86;UBERON:0002346!5.61e-13!90;UBERON:0002619!1.06e-12!22;UBERON:0001950!1.46e-11!20;UBERON:0000956!7.64e-11!25;UBERON:0000203!7.64e-11!25;UBERON:0003056!1.21e-09!61;UBERON:0000153!2.14e-08!129;UBERON:0007811!2.14e-08!129;UBERON:0000178!1.43e-07!15;UBERON:0000179!1.43e-07!15;UBERON:0000463!1.43e-07!15;UBERON:0000033!3.35e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.12e-13;41!UBERON:0001890;1.12e-13;41!UBERON:0003528;2.31e-13;34!UBERON:0002020;2.31e-13;34!UBERON:0001893;2.99e-13;34!UBERON:0002791;3.40e-13;32!UBERON:0001869;5.17e-13;32!UBERON:0002619;1.08e-12;22!UBERON:0000073;2.85e-12;53!UBERON:0002616;2.85e-12;53!UBERON:0007023;3.95e-12;114!UBERON:0001950;1.49e-11;20!UBERON:0000956;7.73e-11;25!UBERON:0000203;7.73e-11;25!UBERON:0000922;1.90e-08;49!UBERON:0000955;5.25e-08;68!UBERON:0001017;7.41e-08;75!UBERON:0000178;1.38e-07;15!UBERON:0000179;1.38e-07;15!UBERON:0000463;1.38e-07;15!UBERON:0001016;2.64e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.80e-45,114;UBERON:0001049,3.26e-23,56;UBERON:0005068,3.26e-23,56;UBERON:0006241,3.26e-23,56;UBERON:0007135,3.26e-23,56;UBERON:0000073,2.15e-21,53;UBERON:0002616,2.15e-21,53;UBERON:0002780,1.78e-18,41;UBERON:0001890,1.78e-18,41;UBERON:0003080,1.78e-18,41;UBERON:0006240,1.78e-18,41;UBERON:0001017,7.97e-16,81;UBERON:0003528,9.19e-16,34;UBERON:0002020,9.19e-16,34;UBERON:0001893,1.54e-15,34;UBERON:0000955,2.08e-15,68;UBERON:0006238,2.08e-15,68;UBERON:0002791,1.53e-14,32;UBERON:0001016,1.56e-14,89;UBERON:0001869,2.67e-14,32;UBERON:0003075,8.50e-14,82;UBERON:0007284,8.50e-14,82;UBERON:0002346,3.11e-13,86;UBERON:0002619,1.06e-12,22;UBERON:0001950,1.46e-11,20;UBERON:0000956,7.64e-11,25;UBERON:0000203,7.64e-11,25;UBERON:0003056,1.16e-09,61;UBERON:0010371,1.54e-08,104;UBERON:0000178,1.43e-07,15;UBERON:0000179,1.43e-07,15;UBERON:0000463,1.43e-07,15 | |||
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| ||
|short_description=p1@WNK1 | |||
}} | }} |
Latest revision as of 04:15, 25 September 2015
Short description: | p1@WNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WNK1_5end |
Coexpression cluster: | C1600_blood_Whole_optic_spinal_locus_globus_thalamus |
Association with transcript: | 0bp_to_ENST00000535572_5end |
EntrezGene: | WNK1 |
HGNC: | 14540 |
UniProt: | F5GWT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.80e-45 | 114 |
neural tube | 3.26e-23 | 56 |
neural rod | 3.26e-23 | 56 |
future spinal cord | 3.26e-23 | 56 |
neural keel | 3.26e-23 | 56 |
regional part of nervous system | 2.15e-21 | 53 |
regional part of brain | 2.15e-21 | 53 |
regional part of forebrain | 1.78e-18 | 41 |
forebrain | 1.78e-18 | 41 |
anterior neural tube | 1.78e-18 | 41 |
future forebrain | 1.78e-18 | 41 |
central nervous system | 7.97e-16 | 81 |
brain grey matter | 9.19e-16 | 34 |
gray matter | 9.19e-16 | 34 |
telencephalon | 1.54e-15 | 34 |
brain | 2.08e-15 | 68 |
future brain | 2.08e-15 | 68 |
regional part of telencephalon | 1.53e-14 | 32 |
nervous system | 1.56e-14 | 89 |
cerebral hemisphere | 2.67e-14 | 32 |
neural plate | 8.50e-14 | 82 |
presumptive neural plate | 8.50e-14 | 82 |
neurectoderm | 3.11e-13 | 86 |
regional part of cerebral cortex | 1.06e-12 | 22 |
neocortex | 1.46e-11 | 20 |
cerebral cortex | 7.64e-11 | 25 |
pallium | 7.64e-11 | 25 |
pre-chordal neural plate | 1.16e-09 | 61 |
ecto-epithelium | 1.54e-08 | 104 |
blood | 1.43e-07 | 15 |
haemolymphatic fluid | 1.43e-07 | 15 |
organism substance | 1.43e-07 | 15 |