FFCP PHASE1:Hg19::chr8:110656891..110656902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55638 | |EntrezGene=55638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |HGNC=26011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000531284_5end | |association_with_transcript=105bp_to_ENST00000531284_5end | ||
|cluster_id=chr8:110656891..110656902,- | |||
|description=CAGE_peak_17_at_SYBU_5end | |description=CAGE_peak_17_at_SYBU_5end | ||
|id=chr8:110656891..110656902,- | |id=chr8:110656891..110656902,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;4.27e-34;1!CL:0000164;4.27e-34;1!CL:0000502;4.27e-34;1!CL:0000172;4.27e-34;1!CL:0000173;4.27e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.85e-34,1;CL:0000164,9.85e-34,1;CL:0000502,9.85e-34,1;CL:0000172,9.85e-34,1;CL:0000173,9.85e-34,1;CL:0002351,9.85e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-44;3!CL:0002351;4.27e-34;1 | |||
|ontology_enrichment_disease=DOID:0050687!7.89e-08!143;DOID:305!3.04e-07!106 | |ontology_enrichment_disease=DOID:0050687!7.89e-08!143;DOID:305!3.04e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4430;4.27e-34;1!DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.85e-34,1;DOID:169,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.22e-20!115;UBERON:0001049!4.11e-20!57;UBERON:0005068!4.11e-20!57;UBERON:0006241!4.11e-20!57;UBERON:0007135!4.11e-20!57;UBERON:0005743!1.04e-18!86;UBERON:0002619!1.99e-18!22;UBERON:0001950!2.63e-18!20;UBERON:0001017!6.30e-18!82;UBERON:0000955!7.64e-18!69;UBERON:0006238!7.64e-18!69;UBERON:0000073!1.34e-17!94;UBERON:0001016!1.34e-17!94;UBERON:0002616!1.58e-17!59;UBERON:0003080!1.82e-17!42;UBERON:0001869!2.24e-17!32;UBERON:0001893!2.52e-17!34;UBERON:0003075!1.38e-16!86;UBERON:0007284!1.38e-16!86;UBERON:0000033!2.25e-16!123;UBERON:0002780!2.44e-16!41;UBERON:0001890!2.44e-16!41;UBERON:0006240!2.44e-16!41;UBERON:0002346!2.83e-16!90;UBERON:0002791!3.03e-16!33;UBERON:0002020!5.03e-16!34;UBERON:0003528!5.03e-16!34;UBERON:0000153!7.33e-16!129;UBERON:0007811!7.33e-16!129;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0003056!8.18e-15!61;UBERON:0000924!6.68e-11!173;UBERON:0006601!6.68e-11!173;UBERON:0004121!6.75e-11!169;UBERON:0001872!1.19e-08!5;UBERON:0000481!1.55e-08!347;UBERON:0000064!4.39e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!3.22e-20!115;UBERON:0001049!4.11e-20!57;UBERON:0005068!4.11e-20!57;UBERON:0006241!4.11e-20!57;UBERON:0007135!4.11e-20!57;UBERON:0005743!1.04e-18!86;UBERON:0002619!1.99e-18!22;UBERON:0001950!2.63e-18!20;UBERON:0001017!6.30e-18!82;UBERON:0000955!7.64e-18!69;UBERON:0006238!7.64e-18!69;UBERON:0000073!1.34e-17!94;UBERON:0001016!1.34e-17!94;UBERON:0002616!1.58e-17!59;UBERON:0003080!1.82e-17!42;UBERON:0001869!2.24e-17!32;UBERON:0001893!2.52e-17!34;UBERON:0003075!1.38e-16!86;UBERON:0007284!1.38e-16!86;UBERON:0000033!2.25e-16!123;UBERON:0002780!2.44e-16!41;UBERON:0001890!2.44e-16!41;UBERON:0006240!2.44e-16!41;UBERON:0002346!2.83e-16!90;UBERON:0002791!3.03e-16!33;UBERON:0002020!5.03e-16!34;UBERON:0003528!5.03e-16!34;UBERON:0000153!7.33e-16!129;UBERON:0007811!7.33e-16!129;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0003056!8.18e-15!61;UBERON:0000924!6.68e-11!173;UBERON:0006601!6.68e-11!173;UBERON:0004121!6.75e-11!169;UBERON:0001872!1.19e-08!5;UBERON:0000481!1.55e-08!347;UBERON:0000064!4.39e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;4.27e-34;1!UBERON:0009899;4.27e-34;1!UBERON:0002037;6.06e-23;6!UBERON:0002680;1.13e-15;9!UBERON:0001895;1.13e-15;9!UBERON:0004733;5.08e-12;12!UBERON:0002028;5.08e-12;12!UBERON:0004732;3.56e-11;13!UBERON:0000955;1.16e-08;68!UBERON:0002021;6.33e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,3.61e-34,1;UBERON:0009899,3.61e-34,1;UBERON:0002037,6.07e-23,6;UBERON:0006215,6.07e-23,6;UBERON:0002680,1.13e-15,9;UBERON:0001895,1.13e-15,9;UBERON:0010092,1.13e-15,9;UBERON:0004733,5.08e-12,12;UBERON:0002028,5.08e-12,12;UBERON:0007277,5.08e-12,12;UBERON:0004732,3.56e-11,13;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0000955,3.92e-08,68;UBERON:0006238,3.92e-08,68;UBERON:0002021,6.13e-08,5;UBERON:0001017,6.23e-07,81 | |||
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| ||
|short_description=p17@SYBU | |short_description=p17@SYBU | ||
}} | }} |
Latest revision as of 03:56, 25 September 2015
Short description: | p17@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SYBU_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_ENST00000531284_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.85e-34 | 1 |
enteroendocrine cell | 9.85e-34 | 1 |
type D enteroendocrine cell | 9.85e-34 | 1 |
somatostatin secreting cell | 9.85e-34 | 1 |
pancreatic D cell | 9.85e-34 | 1 |
progenitor cell of endocrine pancreas | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 3.61e-34 | 1 |
pole of cerebral hemisphere | 3.61e-34 | 1 |
cerebellum | 6.07e-23 | 6 |
rhombic lip | 6.07e-23 | 6 |
regional part of metencephalon | 1.13e-15 | 9 |
metencephalon | 1.13e-15 | 9 |
future metencephalon | 1.13e-15 | 9 |
segmental subdivision of hindbrain | 5.08e-12 | 12 |
hindbrain | 5.08e-12 | 12 |
presumptive hindbrain | 5.08e-12 | 12 |
segmental subdivision of nervous system | 3.56e-11 | 13 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
occipital lobe | 6.13e-08 | 5 |
central nervous system | 6.23e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.85e-34 | 1 |
neuroendocrine tumor | 9.49e-07 | 6 |