FFCP PHASE1:Hg19::chr22:45681795..45681813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7380 | |EntrezGene=7380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12580 | |HGNC=12580 | ||
|TSSclassifier=strong | |||
|UniProt=O75631 | |UniProt=O75631 | ||
|association_with_transcript=-52bp_to_AB010116_5end | |association_with_transcript=-52bp_to_AB010116_5end | ||
|cluster_id=chr22:45681795..45681813,+ | |||
|description=CAGE_peak_2_at_UPK3A_5end | |description=CAGE_peak_2_at_UPK3A_5end | ||
|id=chr22:45681795..45681813,+ | |id=chr22:45681795..45681813,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.49e-74!42;CL:0000860!1.28e-68!45;CL:0002194!2.98e-49!63;CL:0000576!2.98e-49!63;CL:0000040!2.98e-49!63;CL:0000559!2.98e-49!63;CL:0002009!1.61e-47!65;CL:0000766!2.44e-45!76;CL:0000839!1.29e-43!70;CL:0000557!6.71e-43!71;CL:0000763!1.36e-34!112;CL:0000049!1.36e-34!112;CL:0000738!2.55e-33!140;CL:0002087!5.73e-30!119;CL:0000037!2.09e-25!172;CL:0000566!2.09e-25!172;CL:0000988!1.68e-23!182;CL:0002031!4.45e-23!124;CL:0002032!3.18e-22!165;CL:0000837!3.18e-22!165;CL:0002393!2.74e-20!9;CL:0002397!2.74e-20!9;CL:0000875!7.52e-13!3;CL:0002396!7.52e-13!3;CL:0000842!2.39e-11!3;CL:0000134!1.06e-09!358;CL:0002320!2.48e-09!365;CL:0000224!1.26e-08!4;CL:0000219!4.98e-08!390;CL:0000453!3.05e-07!5 | |ontology_enrichment_celltype=CL:0002057!4.49e-74!42;CL:0000860!1.28e-68!45;CL:0002194!2.98e-49!63;CL:0000576!2.98e-49!63;CL:0000040!2.98e-49!63;CL:0000559!2.98e-49!63;CL:0002009!1.61e-47!65;CL:0000766!2.44e-45!76;CL:0000839!1.29e-43!70;CL:0000557!6.71e-43!71;CL:0000763!1.36e-34!112;CL:0000049!1.36e-34!112;CL:0000738!2.55e-33!140;CL:0002087!5.73e-30!119;CL:0000037!2.09e-25!172;CL:0000566!2.09e-25!172;CL:0000988!1.68e-23!182;CL:0002031!4.45e-23!124;CL:0002032!3.18e-22!165;CL:0000837!3.18e-22!165;CL:0002393!2.74e-20!9;CL:0002397!2.74e-20!9;CL:0000875!7.52e-13!3;CL:0002396!7.52e-13!3;CL:0000842!2.39e-11!3;CL:0000134!1.06e-09!358;CL:0002320!2.48e-09!365;CL:0000224!1.26e-08!4;CL:0000219!4.98e-08!390;CL:0000453!3.05e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000875;4.58e-25;3!CL:0002396;4.58e-25;3!CL:0000182;2.46e-14;12!CL:0000576;5.02e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,4.31e-25,3;CL:0002396,4.31e-25,3;CL:0002393,1.32e-18,9;CL:0002397,1.32e-18,9;CL:0000860,2.62e-15,42;CL:0002057,2.62e-15,42;CL:0000182,2.20e-14,12;CL:0000473,2.20e-13,48;CL:0000234,2.20e-13,48;CL:0002194,1.11e-10,59;CL:0000576,1.11e-10,59;CL:0000040,1.11e-10,59;CL:0000559,1.11e-10,59;CL:0002009,2.49e-10,61;CL:0000839,1.51e-09,66;CL:0000557,2.10e-09,67;CL:0000766,9.53e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.41e-15;11!UBERON:0009497;2.77e-13;13!CL:0002057;3.51e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-38!102;UBERON:0003061!1.46e-38!102;UBERON:0002371!2.96e-37!80;UBERON:0002193!2.28e-34!112;UBERON:0001474!3.83e-34!86;UBERON:0002405!8.98e-34!115;UBERON:0004765!5.73e-28!101;UBERON:0001434!5.73e-28!101;UBERON:0003081!9.37e-15!216;UBERON:0002204!5.70e-14!167;UBERON:0002384!7.94e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.77e-09;19!UBERON:0006925;2.77e-09;19!UBERON:0002423;3.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.58e-09,19;UBERON:0006925,2.58e-09,19;UBERON:0008836,2.58e-09,19;UBERON:0002371,2.78e-08,76;UBERON:0008835,4.03e-08,22;UBERON:0003894,4.03e-08,22;UBERON:0009854,8.60e-08,23;UBERON:0001474,1.14e-07,82;UBERON:0007499,3.28e-07,25;UBERON:0009497,3.28e-07,25;UBERON:0000015,3.28e-07,25;UBERON:0002423,3.28e-07,25;UBERON:0006235,3.28e-07,25;UBERON:0004161,3.28e-07,25;UBERON:0004765,5.65e-07,90;UBERON:0009856,5.92e-07,26;UBERON:0002405,9.60e-07,93 | |||
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| ||
|short_description=p2@UPK3A | |short_description=p2@UPK3A | ||
}} | }} |
Latest revision as of 03:48, 25 September 2015
Short description: | p2@UPK3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UPK3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_AB010116_5end |
EntrezGene: | UPK3A |
HGNC: | 12580 |
UniProt: | O75631 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 4.31e-25 | 3 |
CD14-low, CD16-positive monocyte | 4.31e-25 | 3 |
intermediate monocyte | 1.32e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.32e-18 | 9 |
classical monocyte | 2.62e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-15 | 42 |
hepatocyte | 2.20e-14 | 12 |
defensive cell | 2.20e-13 | 48 |
phagocyte | 2.20e-13 | 48 |
monopoietic cell | 1.11e-10 | 59 |
monocyte | 1.11e-10 | 59 |
monoblast | 1.11e-10 | 59 |
promonocyte | 1.11e-10 | 59 |
macrophage dendritic cell progenitor | 2.49e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-09 | 66 |
granulocyte monocyte progenitor cell | 2.10e-09 | 67 |
myeloid leukocyte | 9.53e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
liver | 2.58e-09 | 19 |
digestive gland | 2.58e-09 | 19 |
liver bud | 2.58e-09 | 19 |
bone marrow | 2.78e-08 | 76 |
hepatic diverticulum | 4.03e-08 | 22 |
liver primordium | 4.03e-08 | 22 |
digestive tract diverticulum | 8.60e-08 | 23 |
bone element | 1.14e-07 | 82 |
epithelial sac | 3.28e-07 | 25 |
epithelium of foregut-midgut junction | 3.28e-07 | 25 |
anatomical boundary | 3.28e-07 | 25 |
hepatobiliary system | 3.28e-07 | 25 |
foregut-midgut junction | 3.28e-07 | 25 |
septum transversum | 3.28e-07 | 25 |
skeletal element | 5.65e-07 | 90 |
sac | 5.92e-07 | 26 |
immune system | 9.60e-07 | 93 |