FFCP PHASE1:Hg19::chr17:45608511..45608550,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:45608511..45608550,+
|short_description=p3@NPEPPS
|description=CAGE_peak_3_at_NPEPPS_5end
|association_with_transcript=-31bp_to_ENST00000533573_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9520 | |EntrezGene=9520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7900 | |HGNC=7900 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPT3 | |UniProt=E9PPT3 | ||
|association_with_transcript=-31bp_to_ENST00000533573_5end | |||
|cluster_id=chr17:45608511..45608550,+ | |||
|description=CAGE_peak_3_at_NPEPPS_5end | |||
|id=chr17:45608511..45608550,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.87e-13!42;CL:0000557!2.81e-12!71;CL:0000860!5.38e-12!45;CL:0002009!8.16e-12!65;CL:0000766!1.13e-11!76;CL:0002194!5.57e-11!63;CL:0000576!5.57e-11!63;CL:0000040!5.57e-11!63;CL:0000559!5.57e-11!63;CL:0000839!7.37e-11!70;CL:0000763!2.59e-08!112;CL:0000049!2.59e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.30e-12;33!CL:0002057;4.30e-12;33!CL:0000473;2.74e-09;39!CL:0000234;2.74e-09;39!CL:0000576;3.12e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-13,42;CL:0002057,2.00e-13,42;CL:0000473,4.78e-13,48;CL:0000234,4.78e-13,48;CL:0000557,6.06e-13,67;CL:0000766,2.32e-12,72;CL:0002009,2.38e-12,61;CL:0002194,1.77e-11,59;CL:0000576,1.77e-11,59;CL:0000040,1.77e-11,59;CL:0000559,1.77e-11,59;CL:0000839,1.94e-11,66;CL:0000763,2.68e-08,108;CL:0000049,2.68e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-18!115;UBERON:0001049!2.85e-15!57;UBERON:0005068!2.85e-15!57;UBERON:0006241!2.85e-15!57;UBERON:0007135!2.85e-15!57;UBERON:0002616!4.37e-12!59;UBERON:0003080!2.23e-11!42;UBERON:0001017!2.74e-11!82;UBERON:0002780!8.17e-11!41;UBERON:0001890!8.17e-11!41;UBERON:0006240!8.17e-11!41;UBERON:0000955!1.16e-10!69;UBERON:0006238!1.16e-10!69;UBERON:0005743!6.42e-10!86;UBERON:0003075!2.66e-09!86;UBERON:0007284!2.66e-09!86;UBERON:0002371!2.95e-09!80;UBERON:0002020!3.09e-09!34;UBERON:0003528!3.09e-09!34;UBERON:0000073!9.38e-09!94;UBERON:0001016!9.38e-09!94;UBERON:0002390!2.11e-08!102;UBERON:0003061!2.11e-08!102;UBERON:0002619!2.38e-08!22;UBERON:0002346!3.40e-08!90;UBERON:0002791!5.22e-08!33;UBERON:0001869!5.89e-08!32;UBERON:0001893!7.20e-08!34;UBERON:0000062!8.51e-08!511;UBERON:0002193!1.96e-07!112;UBERON:0001474!2.40e-07!86;UBERON:0001950!2.70e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.80e-08;41!UBERON:0001890;1.80e-08;41!UBERON:0000073;2.20e-08;53!UBERON:0002616;2.20e-08;53!UBERON:0002619;3.70e-08;22!UBERON:0002791;4.48e-08;32!UBERON:0003528;5.34e-08;34!UBERON:0002020;5.34e-08;34!UBERON:0001869;1.49e-07;32!UBERON:0001950;4.42e-07;20!UBERON:0001893;7.12e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.48e-18,114;UBERON:0001049,5.42e-15,56;UBERON:0005068,5.42e-15,56;UBERON:0006241,5.42e-15,56;UBERON:0007135,5.42e-15,56;UBERON:0000073,4.88e-14,53;UBERON:0002616,4.88e-14,53;UBERON:0002780,4.85e-11,41;UBERON:0001890,4.85e-11,41;UBERON:0003080,4.85e-11,41;UBERON:0006240,4.85e-11,41;UBERON:0001017,5.56e-11,81;UBERON:0000955,2.23e-10,68;UBERON:0006238,2.23e-10,68;UBERON:0002371,1.06e-09,76;UBERON:0003075,1.10e-09,82;UBERON:0007284,1.10e-09,82;UBERON:0001016,1.22e-09,89;UBERON:0003528,1.96e-09,34;UBERON:0002020,1.96e-09,34;UBERON:0002390,1.13e-08,98;UBERON:0003061,1.13e-08,98;UBERON:0002791,1.35e-08,32;UBERON:0002346,1.78e-08,86;UBERON:0002619,1.78e-08,22;UBERON:0001869,3.98e-08,32;UBERON:0001893,4.90e-08,34;UBERON:0002193,1.06e-07,108;UBERON:0001474,1.07e-07,82;UBERON:0004765,1.78e-07,90;UBERON:0002405,1.84e-07,93;UBERON:0001950,2.11e-07,20;UBERON:0003056,8.36e-07,61 | |||
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| ||
|short_description=p3@NPEPPS | |||
}} | }} |
Latest revision as of 03:48, 25 September 2015
Short description: | p3@NPEPPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NPEPPS_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000533573_5end |
EntrezGene: | NPEPPS |
HGNC: | 7900 |
UniProt: | E9PPT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-13 | 42 |
defensive cell | 4.78e-13 | 48 |
phagocyte | 4.78e-13 | 48 |
granulocyte monocyte progenitor cell | 6.06e-13 | 67 |
myeloid leukocyte | 2.32e-12 | 72 |
macrophage dendritic cell progenitor | 2.38e-12 | 61 |
monopoietic cell | 1.77e-11 | 59 |
monocyte | 1.77e-11 | 59 |
monoblast | 1.77e-11 | 59 |
promonocyte | 1.77e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.94e-11 | 66 |
myeloid cell | 2.68e-08 | 108 |
common myeloid progenitor | 2.68e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.48e-18 | 114 |
neural tube | 5.42e-15 | 56 |
neural rod | 5.42e-15 | 56 |
future spinal cord | 5.42e-15 | 56 |
neural keel | 5.42e-15 | 56 |
regional part of nervous system | 4.88e-14 | 53 |
regional part of brain | 4.88e-14 | 53 |
regional part of forebrain | 4.85e-11 | 41 |
forebrain | 4.85e-11 | 41 |
anterior neural tube | 4.85e-11 | 41 |
future forebrain | 4.85e-11 | 41 |
central nervous system | 5.56e-11 | 81 |
brain | 2.23e-10 | 68 |
future brain | 2.23e-10 | 68 |
bone marrow | 1.06e-09 | 76 |
neural plate | 1.10e-09 | 82 |
presumptive neural plate | 1.10e-09 | 82 |
nervous system | 1.22e-09 | 89 |
brain grey matter | 1.96e-09 | 34 |
gray matter | 1.96e-09 | 34 |
hematopoietic system | 1.13e-08 | 98 |
blood island | 1.13e-08 | 98 |
regional part of telencephalon | 1.35e-08 | 32 |
neurectoderm | 1.78e-08 | 86 |
regional part of cerebral cortex | 1.78e-08 | 22 |
cerebral hemisphere | 3.98e-08 | 32 |
telencephalon | 4.90e-08 | 34 |
hemolymphoid system | 1.06e-07 | 108 |
bone element | 1.07e-07 | 82 |
skeletal element | 1.78e-07 | 90 |
immune system | 1.84e-07 | 93 |
neocortex | 2.11e-07 | 20 |
pre-chordal neural plate | 8.36e-07 | 61 |