FFCP PHASE1:Hg19::chr7:110731175..110731191,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:110731175..110731191,+
|short_description=p1@LRRN3
|description=CAGE_peak_1_at_LRRN3_5end
|association_with_transcript=25bp_to_ENST00000464835_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000464835_5end | |||
|cluster_id=chr7:110731175..110731191,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_1_at_LRRN3_5end | |||
|id=chr7:110731175..110731191,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.25e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-34!115;UBERON:0001049!2.64e-31!57;UBERON:0005068!2.64e-31!57;UBERON:0006241!2.64e-31!57;UBERON:0007135!2.64e-31!57;UBERON:0002616!2.62e-28!59;UBERON:0001017!1.21e-27!82;UBERON:0002780!5.70e-26!41;UBERON:0001890!5.70e-26!41;UBERON:0006240!5.70e-26!41;UBERON:0003080!1.11e-25!42;UBERON:0005743!1.39e-25!86;UBERON:0000073!1.59e-25!94;UBERON:0001016!1.59e-25!94;UBERON:0000955!5.68e-24!69;UBERON:0006238!5.68e-24!69;UBERON:0002020!5.65e-23!34;UBERON:0003528!5.65e-23!34;UBERON:0003075!7.11e-23!86;UBERON:0007284!7.11e-23!86;UBERON:0001893!8.34e-23!34;UBERON:0001869!3.12e-22!32;UBERON:0002791!3.32e-22!33;UBERON:0002346!4.73e-22!90;UBERON:0000956!5.15e-18!25;UBERON:0000203!5.15e-18!25;UBERON:0004121!1.22e-17!169;UBERON:0000153!1.99e-17!129;UBERON:0007811!1.99e-17!129;UBERON:0000924!2.28e-17!173;UBERON:0006601!2.28e-17!173;UBERON:0003056!3.93e-17!61;UBERON:0000033!2.90e-16!123;UBERON:0002619!5.25e-16!22;UBERON:0001950!9.22e-15!20;UBERON:0000475!4.03e-08!365;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.59e-24;32!UBERON:0002791;1.32e-23;32!UBERON:0003528;1.55e-23;34!UBERON:0002020;1.55e-23;34!UBERON:0001893;2.97e-23;34!UBERON:0002780;4.31e-22;41!UBERON:0001890;4.31e-22;41!UBERON:0000956;3.73e-21;25!UBERON:0000203;3.73e-21;25!UBERON:0000073;1.17e-19;53!UBERON:0002616;1.17e-19;53!UBERON:0002619;9.35e-19;22!UBERON:0001950;2.83e-17;20!UBERON:0001017;5.87e-13;75!UBERON:0000955;7.45e-13;68!UBERON:0001016;1.28e-11;83!UBERON:0007023;4.96e-11;114!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9!UBERON:0000125;2.43e-07;9!UBERON:0002308;2.43e-07;9!UBERON:0011216;3.06e-07;132!UBERON:0000178;4.43e-07;15!UBERON:0000179;4.43e-07;15!UBERON:0000463;4.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.35e-36,114;UBERON:0001049,9.05e-36,56;UBERON:0005068,9.05e-36,56;UBERON:0006241,9.05e-36,56;UBERON:0007135,9.05e-36,56;UBERON:0000073,5.80e-34,53;UBERON:0002616,5.80e-34,53;UBERON:0001017,1.02e-30,81;UBERON:0002780,1.41e-30,41;UBERON:0001890,1.41e-30,41;UBERON:0003080,1.41e-30,41;UBERON:0006240,1.41e-30,41;UBERON:0001016,2.25e-30,89;UBERON:0003075,6.80e-28,82;UBERON:0007284,6.80e-28,82;UBERON:0002346,3.53e-27,86;UBERON:0000955,5.11e-27,68;UBERON:0006238,5.11e-27,68;UBERON:0003528,5.19e-27,34;UBERON:0002020,5.19e-27,34;UBERON:0001893,8.25e-27,34;UBERON:0001869,3.96e-26,32;UBERON:0002791,9.44e-26,32;UBERON:0010371,5.00e-23,104;UBERON:0003056,9.42e-22,61;UBERON:0000956,4.12e-21,25;UBERON:0000203,4.12e-21,25;UBERON:0010314,5.23e-20,132;UBERON:0004121,1.69e-19,171;UBERON:0000924,1.69e-19,171;UBERON:0006601,1.69e-19,171;UBERON:0002619,1.01e-18,22;UBERON:0001950,3.04e-17,20;UBERON:0011216,5.08e-13,223;UBERON:0000025,7.30e-08,192;UBERON:0002420,1.32e-07,9;UBERON:0007245,1.32e-07,9;UBERON:0010009,1.32e-07,9;UBERON:0010011,1.32e-07,9;UBERON:0000454,1.32e-07,9;UBERON:0000125,2.40e-07,9;UBERON:0002308,2.40e-07,9;UBERON:0000178,3.55e-07,15;UBERON:0000179,3.55e-07,15;UBERON:0000463,3.55e-07,15;UBERON:0003076,7.77e-07,15;UBERON:0003057,7.77e-07,15 | |||
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| ||
|short_description=p1@LRRN3 | |||
}} | }} |
Latest revision as of 03:45, 25 September 2015
Short description: | p1@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 25bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data